RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 MSL3Q8N5Y2 521 aaKnown RBP11.9□□□□□ -0.5
CCDC170-201ENST00000239374 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.9□□□□□ -0.5
CCDC170-201ENST00000239374 MTMR8Q96EF0 704 aa11.9□□□□□ -0.5
CCDC170-201ENST00000239374 DLATP10515 647 aaKnown RBP11.9□□□□□ -0.5
CCDC170-201ENST00000239374 GAP43P17677 238 aa11.9□□□□□ -0.5
CCDC170-201ENST00000239374 KNOP1Q1ED39 458 aaKnown RBP11.9□□□□□ -0.5
CCDC170-201ENST00000239374 PPP1R21Q6ZMI0 780 aa11.9□□□□□ -0.5
CCDC170-201ENST00000239374 SRRM1Q8IYB3 904 aaKnown RBP11.9□□□□□ -0.5
CCDC170-201ENST00000239374 CDCA7Q9BWT1 371 aaPredicted RBP11.9□□□□□ -0.5
CCDC170-201ENST00000239374 AMNQ9BXJ7 453 aa11.9□□□□□ -0.5
CCDC170-201ENST00000239374 MAPK4P31152 587 aa11.9□□□□□ -0.5
CCDC170-201ENST00000239374 UBXN2AP68543 259 aa11.9□□□□□ -0.5
CCDC170-201ENST00000239374 FIGNQ5HY92 759 aa11.9□□□□□ -0.5
CCDC170-201ENST00000239374 GPR101Q96P66 508 aaPredicted RBP11.9□□□□□ -0.5
CCDC170-201ENST00000239374 PRMT1Q99873 361 aaKnown RBP11.9□□□□□ -0.5
CCDC170-201ENST00000239374 YIPF3Q9GZM5 350 aa11.9□□□□□ -0.5
CCDC170-201ENST00000239374 ECT2Q9H8V3 914 aa11.9□□□□□ -0.5
CCDC170-201ENST00000239374 TMOD4Q9NZQ9 345 aa11.9□□□□□ -0.5
CCDC170-201ENST00000239374 SPATA31A3Q5VYP0 1347 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 SYNGAP1Q96PV0 1343 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 NPHP3-ACAD11A0A0J9YXS1 232 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 BAG2O95816 211 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 FAM153BP0C7A2 387 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 SLC9A1P19634 815 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 FGFR4P22455 802 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 AMPD2Q01433 879 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 FAM153CQ494X1 144 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 NSMFQ6X4W1 530 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 MARCH10Q8NA82 808 aaPredicted RBP11.89□□□□□ -0.51
CCDC170-201ENST00000239374 ANO3Q9BYT9 981 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 FAM153AQ9UHL3 310 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 JCADQ9P266 1359 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 TCRBV5S4A2TA0A5A2 114 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 TXNDC9O14530 226 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 CDK17Q00537 523 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 DRAP1Q14919 205 aaPredicted RBP11.89□□□□□ -0.51
CCDC170-201ENST00000239374 NAALADL2Q58DX5 795 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 SUGP1Q8IWZ8 645 aaKnown RBP11.89□□□□□ -0.51
CCDC170-201ENST00000239374 CTAGE3PQ8IX95 158 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 SAAL1Q96ER3 474 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 DIS3Q9Y2L1 958 aaKnown RBP11.89□□□□□ -0.51
CCDC170-201ENST00000239374 RIMS1Q86UR5 1692 aaKnown RBP11.89□□□□□ -0.51
CCDC170-201ENST00000239374 CFAP73A6NFT4 308 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 I3L4J1 428 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 STXBP3O00186 592 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 UCHL3P15374 230 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 TNNI1P19237 187 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 PTK2Q05397 1052 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 RBM26Q5T8P6 1007 aaKnown RBP11.89□□□□□ -0.51
CCDC170-201ENST00000239374 C12orf60Q5U649 245 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 PHLDB3Q6NSJ2 640 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 PALM2Q8IXS6 379 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 CCDC89Q8N998 374 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 BBOF1Q8ND07 529 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 PIGOQ8TEQ8 1089 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 CAVIN3Q969G5 261 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 RILPQ96NA2 401 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 PARVGQ9HBI0 331 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 ETNK1Q9HBU6 452 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 SERPINB13Q9UIV8 391 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 MIF4GDA9UHW6 222 aaKnown RBP11.89□□□□□ -0.51
CCDC170-201ENST00000239374 FOSP01100 380 aaPredicted RBP11.89□□□□□ -0.51
CCDC170-201ENST00000239374 BRAFP15056 766 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 STAT3P40763 770 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 AGBL2Q5U5Z8 902 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 MIER3Q7Z3K6 550 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 SEMA6BQ9H3T3 888 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 FAM205AQ6ZU69 1335 aa11.89□□□□□ -0.51
CCDC170-201ENST00000239374 EXOC1LA0A1B0GW35 172 aa11.88□□□□□ -0.51
CCDC170-201ENST00000239374 RCCD1A6NED2 376 aa11.88□□□□□ -0.51
CCDC170-201ENST00000239374 CA4P22748 312 aa11.88□□□□□ -0.51
CCDC170-201ENST00000239374 GALCP54803 685 aa11.88□□□□□ -0.51
CCDC170-201ENST00000239374 RASIP1Q5U651 963 aa11.88□□□□□ -0.51
CCDC170-201ENST00000239374 ZNF746Q6NUN9 644 aaPredicted RBP11.88□□□□□ -0.51
CCDC170-201ENST00000239374 CFAP61Q8NHU2 1237 aa11.88□□□□□ -0.51
CCDC170-201ENST00000239374 RFFLQ8WZ73 363 aa11.88□□□□□ -0.51
CCDC170-201ENST00000239374 MAK16Q9BXY0 300 aaKnown RBP11.88□□□□□ -0.51
CCDC170-201ENST00000239374 PACSIN1Q9BY11 444 aa11.88□□□□□ -0.51
CCDC170-201ENST00000239374 VCPKMTQ9H867 229 aa11.88□□□□□ -0.51
CCDC170-201ENST00000239374 ANAPC4Q9UJX5 808 aa11.88□□□□□ -0.51
CCDC170-201ENST00000239374 STAMBPO95630 424 aa11.88□□□□□ -0.51
CCDC170-201ENST00000239374 USP11P51784 963 aa11.88□□□□□ -0.51
CCDC170-201ENST00000239374 MXD3Q9BW11 206 aa11.88□□□□□ -0.51
CCDC170-201ENST00000239374 TLR10Q9BXR5 811 aa11.88□□□□□ -0.51
CCDC170-201ENST00000239374 WDR91A4D1P6 747 aa11.88□□□□□ -0.51
CCDC170-201ENST00000239374 FAM187AA6NFU0 413 aa11.88□□□□□ -0.51
CCDC170-201ENST00000239374 DIAPH2O60879 1101 aa11.88□□□□□ -0.51
CCDC170-201ENST00000239374 PDE6BP35913 854 aa11.88□□□□□ -0.51
CCDC170-201ENST00000239374 NSFP46459 744 aaKnown RBP11.88□□□□□ -0.51
CCDC170-201ENST00000239374 RWDD2BP57060 319 aa11.88□□□□□ -0.51
CCDC170-201ENST00000239374 ICA1Q05084 483 aa11.88□□□□□ -0.51
CCDC170-201ENST00000239374 CTTNQ14247 550 aaKnown RBP11.88□□□□□ -0.51
CCDC170-201ENST00000239374 WDR59Q6PJI9 974 aa11.88□□□□□ -0.51
CCDC170-201ENST00000239374 CCDC137Q6PK04 289 aaKnown RBP11.88□□□□□ -0.51
CCDC170-201ENST00000239374 HOOK2Q96ED9 719 aa11.88□□□□□ -0.51
CCDC170-201ENST00000239374 KDM6AO15550 1401 aaPredicted RBP11.88□□□□□ -0.51
CCDC170-201ENST00000239374 CCT8L1PA6NM43 557 aa11.88□□□□□ -0.51
CCDC170-201ENST00000239374 MYCLP12524 364 aaPredicted RBP11.88□□□□□ -0.51
CCDC170-201ENST00000239374 MAN1A1P33908 653 aa11.88□□□□□ -0.51
CCDC170-201ENST00000239374 CERKLQ49MI3 558 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms