RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 TMCO5BA8MYB1 307 aa18.86■□□□□ 0.61
USB1-201ENST00000219281 MEIS2O14770 477 aa18.86■□□□□ 0.61
USB1-201ENST00000219281 CALUO43852 315 aaPredicted RBP18.86■□□□□ 0.61
USB1-201ENST00000219281 HLA-DOAP06340 250 aa18.86■□□□□ 0.61
USB1-201ENST00000219281 SPATA31C1P0DKV0 1188 aa18.86■□□□□ 0.61
USB1-201ENST00000219281 ECHS1P30084 290 aa18.86■□□□□ 0.61
USB1-201ENST00000219281 SNAP25P60880 206 aa18.86■□□□□ 0.61
USB1-201ENST00000219281 ARHGAP4P98171 946 aa18.86■□□□□ 0.61
USB1-201ENST00000219281 EPHA7Q15375 998 aa18.86■□□□□ 0.61
USB1-201ENST00000219281 KCTD19Q17RG1 926 aaPredicted RBP18.86■□□□□ 0.61
USB1-201ENST00000219281 EPM2AIP1Q7L775 607 aaPredicted RBP18.86■□□□□ 0.61
USB1-201ENST00000219281 DDX42Q86XP3 938 aaKnown RBP eCLIP18.86■□□□□ 0.61
USB1-201ENST00000219281 METTL13Q8N6R0 699 aa18.86■□□□□ 0.61
USB1-201ENST00000219281 TPCN2Q8NHX9 752 aa18.86■□□□□ 0.61
USB1-201ENST00000219281 ACTRT1Q8TDG2 376 aa18.86■□□□□ 0.61
USB1-201ENST00000219281 MYO3BQ8WXR4 1341 aa18.86■□□□□ 0.61
USB1-201ENST00000219281 MRIQ9BWK5 157 aa18.86■□□□□ 0.61
USB1-201ENST00000219281 BCAS3Q9H6U6 928 aa18.86■□□□□ 0.61
USB1-201ENST00000219281 DNAJC18Q9H819 358 aa18.86■□□□□ 0.61
USB1-201ENST00000219281 RSPH10B2B2RC85 870 aa18.86■□□□□ 0.61
USB1-201ENST00000219281 ECE2O60344 883 aa18.86■□□□□ 0.61
USB1-201ENST00000219281 RSPH10BP0C881 870 aa18.86■□□□□ 0.61
USB1-201ENST00000219281 SLC15A2Q16348 729 aa18.86■□□□□ 0.61
USB1-201ENST00000219281 SHROOM1Q2M3G4 852 aaPredicted RBP18.86■□□□□ 0.61
USB1-201ENST00000219281 ERMNQ8TAM6 284 aa18.86■□□□□ 0.61
USB1-201ENST00000219281 EPN3Q9H201 632 aa18.86■□□□□ 0.61
USB1-201ENST00000219281 SCN9AQ15858 1988 aa18.85■□□□□ 0.61
USB1-201ENST00000219281 PDXKO00764 312 aa18.85■□□□□ 0.61
USB1-201ENST00000219281 FLOT1O75955 427 aa18.85■□□□□ 0.61
USB1-201ENST00000219281 INPP5BP32019 993 aa18.85■□□□□ 0.61
USB1-201ENST00000219281 CASP4P49662 377 aa18.85■□□□□ 0.61
USB1-201ENST00000219281 EMC10Q5UCC4 262 aa18.85■□□□□ 0.61
USB1-201ENST00000219281 GJB7Q6PEY0 223 aa18.85■□□□□ 0.61
USB1-201ENST00000219281 B4GALNT4Q76KP1 1039 aa18.85■□□□□ 0.61
USB1-201ENST00000219281 CENPHQ9H3R5 247 aa18.85■□□□□ 0.61
USB1-201ENST00000219281 ATAD5Q96QE3 1844 aa18.85■□□□□ 0.61
USB1-201ENST00000219281 HMGB1P1B2RPK0 211 aaPredicted RBP18.85■□□□□ 0.61
USB1-201ENST00000219281 CLIC2O15247 247 aa18.85■□□□□ 0.61
USB1-201ENST00000219281 SART1O43290 800 aaKnown RBP18.85■□□□□ 0.61
USB1-201ENST00000219281 NR3C1P04150 777 aa18.85■□□□□ 0.61
USB1-201ENST00000219281 EEF2P13639 858 aaKnown RBP18.85■□□□□ 0.61
USB1-201ENST00000219281 RPA1P27694 616 aa18.85■□□□□ 0.61
USB1-201ENST00000219281 HSD17B3P37058 310 aa18.85■□□□□ 0.61
USB1-201ENST00000219281 PRKCIP41743 596 aa18.85■□□□□ 0.61
USB1-201ENST00000219281 DDX47Q9H0S4 455 aaKnown RBP18.85■□□□□ 0.61
USB1-201ENST00000219281 TMBIM4Q9HC24 238 aa18.85■□□□□ 0.61
USB1-201ENST00000219281 SIX2Q9NPC8 291 aa18.85■□□□□ 0.61
USB1-201ENST00000219281 NOC2LQ9Y3T9 749 aaKnown RBP18.85■□□□□ 0.61
USB1-201ENST00000219281 ASTN1O14525 1302 aa18.84■□□□□ 0.61
USB1-201ENST00000219281 DDTLA6NHG4 134 aaPredicted RBP18.84■□□□□ 0.61
USB1-201ENST00000219281 FAM196BA6NMK8 535 aa18.84■□□□□ 0.61
USB1-201ENST00000219281 PGRMC1O00264 195 aaKnown RBP18.84■□□□□ 0.61
USB1-201ENST00000219281 PPP1R37O75864 691 aa18.84■□□□□ 0.61
USB1-201ENST00000219281 ZBTB48P10074 688 aaPredicted RBP18.84■□□□□ 0.61
USB1-201ENST00000219281 MDH1P40925 334 aaKnown RBP18.84■□□□□ 0.61
USB1-201ENST00000219281 CYP4A11Q02928 519 aa18.84■□□□□ 0.61
USB1-201ENST00000219281 EN1Q05925 392 aaPredicted RBP18.84■□□□□ 0.61
USB1-201ENST00000219281 TCP10Q12799 353 aa18.84■□□□□ 0.61
USB1-201ENST00000219281 ITGB3BPQ13352 177 aaPredicted RBP18.84■□□□□ 0.61
USB1-201ENST00000219281 CUL1Q13616 776 aa18.84■□□□□ 0.61
USB1-201ENST00000219281 SLFN13Q68D06 897 aa18.84■□□□□ 0.61
USB1-201ENST00000219281 MOXD1Q6UVY6 613 aa18.84■□□□□ 0.61
USB1-201ENST00000219281 PEX26Q7Z412 305 aa18.84■□□□□ 0.61
USB1-201ENST00000219281 C1orf131Q8NDD1 294 aaKnown RBP18.84■□□□□ 0.61
USB1-201ENST00000219281 OR2W6PQ8NHA6 318 aa18.84■□□□□ 0.61
USB1-201ENST00000219281 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.84■□□□□ 0.613e-11■■■■■ 52.2
USB1-201ENST00000219281 KAT2BQ92831 832 aa18.84■□□□□ 0.61
USB1-201ENST00000219281 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.84■□□□□ 0.61
USB1-201ENST00000219281 NEUROG2Q9H2A3 272 aa18.84■□□□□ 0.61
USB1-201ENST00000219281 FAM198AQ9UFP1 575 aa18.84■□□□□ 0.61
USB1-201ENST00000219281 RGS17Q9UGC6 210 aaPredicted RBP18.84■□□□□ 0.61
USB1-201ENST00000219281 C10orf71Q711Q0 1435 aa18.84■□□□□ 0.61
USB1-201ENST00000219281 GOLGA6L10A6NI86 522 aa18.84■□□□□ 0.61
USB1-201ENST00000219281 KRIT1O00522 736 aa18.84■□□□□ 0.61
USB1-201ENST00000219281 HPDP32754 393 aaPredicted RBP18.84■□□□□ 0.61
USB1-201ENST00000219281 FKBP1AP62942 108 aaKnown RBP18.84■□□□□ 0.61
USB1-201ENST00000219281 KCNA1Q09470 495 aa18.84■□□□□ 0.61
USB1-201ENST00000219281 AP3B2Q13367 1082 aa18.84■□□□□ 0.61
USB1-201ENST00000219281 PTGISQ16647 500 aa18.84■□□□□ 0.61
USB1-201ENST00000219281 SH3BP5LQ7L8J4 393 aa18.84■□□□□ 0.61
USB1-201ENST00000219281 CRYGNQ8WXF5 182 aa18.84■□□□□ 0.61
USB1-201ENST00000219281 CAMKK2Q96RR4 588 aa18.84■□□□□ 0.61
USB1-201ENST00000219281 TYW1Q9NV66 732 aaKnown RBP18.84■□□□□ 0.61
USB1-201ENST00000219281 GCNT4Q9P109 453 aa18.84■□□□□ 0.61
USB1-201ENST00000219281 NENFQ9UMX5 172 aa18.84■□□□□ 0.61
USB1-201ENST00000219281 GCNT3O95395 438 aa18.83■□□□□ 0.61
USB1-201ENST00000219281 H2AFZP0C0S5 128 aa18.83■□□□□ 0.61
USB1-201ENST00000219281 ITGA4P13612 1032 aa18.83■□□□□ 0.61
USB1-201ENST00000219281 SEC24CP53992 1094 aa18.83■□□□□ 0.61
USB1-201ENST00000219281 JAM2P57087 298 aa18.83■□□□□ 0.61
USB1-201ENST00000219281 UAP1Q16222 522 aaPredicted RBP18.83■□□□□ 0.61
USB1-201ENST00000219281 AOC3Q16853 763 aa18.83■□□□□ 0.61
USB1-201ENST00000219281 NAA35Q5VZE5 725 aa18.83■□□□□ 0.61
USB1-201ENST00000219281 ICE2Q659A1 982 aa18.83■□□□□ 0.61
USB1-201ENST00000219281 H2AFVQ71UI9 128 aa18.83■□□□□ 0.61
USB1-201ENST00000219281 EIF1ADQ8N9N8 165 aaKnown RBP18.83■□□□□ 0.61
USB1-201ENST00000219281 U2AF1L4Q8WU68 220 aaKnown RBP18.83■□□□□ 0.61
USB1-201ENST00000219281 SLC35C1Q96A29 364 aa18.83■□□□□ 0.61
USB1-201ENST00000219281 LENG9Q96B70 501 aa18.83■□□□□ 0.61
USB1-201ENST00000219281 CALR3Q96L12 384 aaKnown RBP18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms