RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 IYDQ6PHW0 289 aa15.61■□□□□ 0.09
SPTLC2-201ENST00000216484 INPP5DQ92835 1189 aa15.61■□□□□ 0.09
SPTLC2-201ENST00000216484 PCDHGB4Q9UN71 923 aa15.61■□□□□ 0.09
SPTLC2-201ENST00000216484 NRBP2Q9NSY0 501 aa15.61■□□□□ 0.09
SPTLC2-201ENST00000216484 PDCLQ13371 301 aa15.61■□□□□ 0.09
SPTLC2-201ENST00000216484 THEMIS2Q5TEJ8 643 aa15.61■□□□□ 0.09
SPTLC2-201ENST00000216484 SPATA1Q5VX52 437 aa15.61■□□□□ 0.09
SPTLC2-201ENST00000216484 SCARA5Q6ZMJ2 495 aa15.61■□□□□ 0.09
SPTLC2-201ENST00000216484 EXOC8Q8IYI6 725 aa15.61■□□□□ 0.09
SPTLC2-201ENST00000216484 GPKOWQ92917 476 aaPredicted RBP eCLIP15.61■□□□□ 0.09
SPTLC2-201ENST00000216484 F5H423 210 aaPredicted RBP15.61■□□□□ 0.09
SPTLC2-201ENST00000216484 ARHGAP17Q68EM7 881 aa15.61■□□□□ 0.09
SPTLC2-201ENST00000216484 PCDHA5Q9Y5H7 936 aa15.61■□□□□ 0.09
SPTLC2-201ENST00000216484 KPNA7A9QM74 516 aa15.6■□□□□ 0.09
SPTLC2-201ENST00000216484 RBL2Q08999 1139 aa15.6■□□□□ 0.09
SPTLC2-201ENST00000216484 MCTP2Q6DN12 878 aa15.6■□□□□ 0.09
SPTLC2-201ENST00000216484 FAM81BQ96LP2 452 aa15.6■□□□□ 0.09
SPTLC2-201ENST00000216484 COQ7Q99807 217 aa15.6■□□□□ 0.09
SPTLC2-201ENST00000216484 SPDYAQ5MJ70 313 aa15.6■□□□□ 0.09
SPTLC2-201ENST00000216484 GFM2Q969S9 779 aaKnown RBP15.6■□□□□ 0.09
SPTLC2-201ENST00000216484 TUBGCP3Q96CW5 907 aa15.6■□□□□ 0.09
SPTLC2-201ENST00000216484 MTERF3Q96E29 417 aa15.6■□□□□ 0.09
SPTLC2-201ENST00000216484 ECT2Q9H8V3 914 aa15.6■□□□□ 0.09
SPTLC2-201ENST00000216484 M0R2C6 588 aa15.6■□□□□ 0.09
SPTLC2-201ENST00000216484 TOM1O60784 492 aa15.6■□□□□ 0.09
SPTLC2-201ENST00000216484 FBXO11Q86XK2 927 aa15.6■□□□□ 0.09
SPTLC2-201ENST00000216484 AGR3Q8TD06 166 aa15.6■□□□□ 0.09
SPTLC2-201ENST00000216484 CCDC149Q6ZUS6 474 aa15.6■□□□□ 0.09
SPTLC2-201ENST00000216484 FAM47EQ6ZV65 393 aa15.6■□□□□ 0.09
SPTLC2-201ENST00000216484 SH3BP5LQ7L8J4 393 aa15.6■□□□□ 0.09
SPTLC2-201ENST00000216484 ZSCAN10Q96SZ4 725 aaPredicted RBP15.6■□□□□ 0.09
SPTLC2-201ENST00000216484 FHDC1Q9C0D6 1143 aaPredicted RBP15.6■□□□□ 0.09
SPTLC2-201ENST00000216484 PCIF1Q9H4Z3 704 aa15.6■□□□□ 0.09
SPTLC2-201ENST00000216484 DMAP1Q9NPF5 467 aaPredicted RBP15.6■□□□□ 0.09
SPTLC2-201ENST00000216484 KRT37O76014 449 aa15.6■□□□□ 0.09
SPTLC2-201ENST00000216484 PBXIP1Q96AQ6 731 aa15.6■□□□□ 0.09
SPTLC2-201ENST00000216484 SAYSD1Q9NPB0 183 aa15.6■□□□□ 0.09
SPTLC2-201ENST00000216484 TBC1D23Q9NUY8 699 aa15.6■□□□□ 0.09
SPTLC2-201ENST00000216484 NSMCE4AQ9NXX6 385 aa15.6■□□□□ 0.09
SPTLC2-201ENST00000216484 H2AFY2Q9P0M6 372 aaPredicted RBP15.6■□□□□ 0.09
SPTLC2-201ENST00000216484 HEY1Q9Y5J3 304 aa15.6■□□□□ 0.09
SPTLC2-201ENST00000216484 PIK3R2O00459 728 aa15.6■□□□□ 0.09
SPTLC2-201ENST00000216484 ZBTB33Q86T24 672 aa15.6■□□□□ 0.09
SPTLC2-201ENST00000216484 RASSF3Q86WH2 238 aa15.6■□□□□ 0.09
SPTLC2-201ENST00000216484 DEPDC7Q96QD5 511 aa15.6■□□□□ 0.09
SPTLC2-201ENST00000216484 TSC22D2O75157 780 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 FMNL1O95466 1100 aaPredicted RBP15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 DCAF4L1Q3SXM0 396 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 ARHGAP18Q8N392 663 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 ZNF577Q9BSK1 485 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 MAP3K5Q99683 1374 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 MEIS1O00470 390 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 CLIC2O15247 247 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 FASTKD5Q7L8L6 764 aaKnown RBP15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 KLHL18O94889 574 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 SERPINB1P30740 379 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 SLC44A4Q53GD3 710 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 GINS4Q9BRT9 223 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 EML4Q9HC35 981 aaKnown RBP15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 NDFIP2Q9NV92 336 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 CYTH3O43739 400 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 MAGEA9P43362 315 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 AP1B1Q10567 949 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 CERKLQ49MI3 558 aaPredicted RBP15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 MIS18BP1Q6P0N0 1132 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 C16orf62Q7Z3J2 963 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 CLEC4FQ8N1N0 589 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 RFWD2Q8NHY2 731 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 SIKE1Q9BRV8 207 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 MLXIPLQ9NP71 852 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 NUP62P37198 522 aaPredicted RBP15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 DEFA1P59665 94 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 DEFA3P59666 94 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 KCTD17Q8N5Z5 321 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 VPS11Q9H270 941 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 EHD2Q9NZN4 543 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 PDE8AO60658 829 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 NPM3O75607 178 aaKnown RBP15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 CUL1Q13616 776 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 NBPF9Q3BBW0 867 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 ST13P5Q8NFI4 369 aaPredicted RBP15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 SYNDIG1Q9H7V2 258 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 USP40Q9NVE5 1235 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 FAM32AQ9Y421 112 aaKnown RBP15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 SPDYE5A6NIY4 337 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 RUNX1T1Q06455 604 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 SPDYE7PQ495Y7 208 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 CCNYL1Q8N7R7 359 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 DIS3LQ8TF46 1054 aaKnown RBP15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 NLRP4Q96MN2 994 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 CLIC6Q96NY7 704 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 PPP1R16BQ96T49 567 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 NFU1Q9UMS0 254 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 PLAAQ9Y263 795 aa15.59■□□□□ 0.09
SPTLC2-201ENST00000216484 UBN2Q6ZU65 1347 aa15.58■□□□□ 0.09
SPTLC2-201ENST00000216484 RAD23BP54727 409 aa15.58■□□□□ 0.09
SPTLC2-201ENST00000216484 PKN3Q6P5Z2 889 aa15.58■□□□□ 0.09
SPTLC2-201ENST00000216484 TTLL7Q6ZT98 887 aa15.58■□□□□ 0.09
SPTLC2-201ENST00000216484 AP5M1Q9H0R1 490 aa15.58■□□□□ 0.09
SPTLC2-201ENST00000216484 KLHL31Q9H511 634 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms