RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 SH3GLB2Q9NR46 395 aa18.03■□□□□ 0.48
ERCC1-201ENST00000013807 PLXNA4Q9HCM2 1894 aa18.03■□□□□ 0.48
ERCC1-201ENST00000013807 BACH1O14867 736 aa18.02■□□□□ 0.48
ERCC1-201ENST00000013807 EDIL3O43854 480 aa18.02■□□□□ 0.48
ERCC1-201ENST00000013807 STAG3L1P0CL83 205 aa18.02■□□□□ 0.48
ERCC1-201ENST00000013807 PDIA3P30101 505 aaKnown RBP18.02■□□□□ 0.48
ERCC1-201ENST00000013807 CTNNB1P35222 781 aa18.02■□□□□ 0.48
ERCC1-201ENST00000013807 USP11P51784 963 aa18.02■□□□□ 0.48
ERCC1-201ENST00000013807 TMEM62Q0P6H9 643 aa18.02■□□□□ 0.48
ERCC1-201ENST00000013807 PAK2Q13177 524 aa18.02■□□□□ 0.48
ERCC1-201ENST00000013807 CAMK1Q14012 370 aa18.02■□□□□ 0.48
ERCC1-201ENST00000013807 SWSAP1Q6NVH7 229 aa18.02■□□□□ 0.48
ERCC1-201ENST00000013807 PDXDC2PQ6P474 469 aa18.02■□□□□ 0.48
ERCC1-201ENST00000013807 EPHX3Q9H6B9 360 aa18.02■□□□□ 0.48
ERCC1-201ENST00000013807 ERVK-5Q9HDB9 667 aa18.02■□□□□ 0.48
ERCC1-201ENST00000013807 PLAGL2Q9UPG8 496 aa18.02■□□□□ 0.48
ERCC1-201ENST00000013807 PCDHA10Q9Y5I2 948 aa18.02■□□□□ 0.48
ERCC1-201ENST00000013807 PI4K2BG5E9Z4 385 aa18.01■□□□□ 0.47
ERCC1-201ENST00000013807 GRM6O15303 877 aa18.01■□□□□ 0.47
ERCC1-201ENST00000013807 MMP1P03956 469 aa18.01■□□□□ 0.47
ERCC1-201ENST00000013807 LTBRP36941 435 aa18.01■□□□□ 0.47
ERCC1-201ENST00000013807 ODR4Q5SWX8 454 aa18.01■□□□□ 0.47
ERCC1-201ENST00000013807 PTCRAQ6ISU1 281 aaPredicted RBP18.01■□□□□ 0.47
ERCC1-201ENST00000013807 FAM177A1Q8N128 213 aaPredicted RBP18.01■□□□□ 0.47
ERCC1-201ENST00000013807 ZNF710Q8N1W2 664 aa18.01■□□□□ 0.47
ERCC1-201ENST00000013807 CCDC148Q8NFR7 591 aa18.01■□□□□ 0.47
ERCC1-201ENST00000013807 PHKBQ93100 1093 aa18.01■□□□□ 0.47
ERCC1-201ENST00000013807 ZSWIM6Q9HCJ5 1215 aa18.01■□□□□ 0.47
ERCC1-201ENST00000013807 RNF216Q9NWF9 866 aaPredicted RBP18.01■□□□□ 0.47
ERCC1-201ENST00000013807 NAP1L2Q9ULW6 460 aaPredicted RBP18.01■□□□□ 0.47
ERCC1-201ENST00000013807 ARIH1Q9Y4X5 557 aaPredicted RBP18.01■□□□□ 0.47
ERCC1-201ENST00000013807 DDX39AO00148 427 aaKnown RBP18■□□□□ 0.47
ERCC1-201ENST00000013807 GPR37L1O60883 481 aa18■□□□□ 0.47
ERCC1-201ENST00000013807 C22orf31O95567 290 aa18■□□□□ 0.47
ERCC1-201ENST00000013807 SARSP49591 514 aaKnown RBP18■□□□□ 0.47
ERCC1-201ENST00000013807 RUFY3Q7L099 469 aa18■□□□□ 0.47
ERCC1-201ENST00000013807 KHSRPQ92945 711 aaKnown RBP eCLIP18■□□□□ 0.47
ERCC1-201ENST00000013807 CDHR5Q9HBB8 845 aa18■□□□□ 0.47
ERCC1-201ENST00000013807 RGS18Q9NS28 235 aa18■□□□□ 0.47
ERCC1-201ENST00000013807 MRPL42Q9Y6G3 142 aaKnown RBP18■□□□□ 0.47
ERCC1-201ENST00000013807 MAGEB2O15479 319 aa17.99■□□□□ 0.47
ERCC1-201ENST00000013807 PSAPP07602 524 aa17.99■□□□□ 0.47
ERCC1-201ENST00000013807 CRYBB1P53674 252 aaPredicted RBP17.99■□□□□ 0.47
ERCC1-201ENST00000013807 AKAP17AQ02040 695 aaKnown RBP17.99■□□□□ 0.47
ERCC1-201ENST00000013807 PRR16Q569H4 304 aa17.99■□□□□ 0.47
ERCC1-201ENST00000013807 GJD3Q8N144 294 aa17.99■□□□□ 0.47
ERCC1-201ENST00000013807 LINC01465Q8N7H1 131 aa17.99■□□□□ 0.47
ERCC1-201ENST00000013807 TMEM40Q8WWA1 233 aa17.99■□□□□ 0.47
ERCC1-201ENST00000013807 CCDC136Q96JN2 1154 aa17.99■□□□□ 0.47
ERCC1-201ENST00000013807 RIT2Q99578 217 aa17.99■□□□□ 0.47
ERCC1-201ENST00000013807 TM6SF1Q9BZW5 370 aa17.99■□□□□ 0.47
ERCC1-201ENST00000013807 C1orf112Q9NSG2 853 aa17.99■□□□□ 0.47
ERCC1-201ENST00000013807 PRKAG3Q9UGI9 489 aa17.99■□□□□ 0.47
ERCC1-201ENST00000013807 CEP131Q9UPN4 1083 aa17.99■□□□□ 0.47
ERCC1-201ENST00000013807 NOC2LQ9Y3T9 749 aaKnown RBP17.99■□□□□ 0.47
ERCC1-201ENST00000013807 TRIOO75962 3097 aa17.98■□□□□ 0.47
ERCC1-201ENST00000013807 C9IYK1 514 aa17.98■□□□□ 0.47
ERCC1-201ENST00000013807 GPR182O15218 404 aa17.98■□□□□ 0.47
ERCC1-201ENST00000013807 GPR32O75388 356 aa17.98■□□□□ 0.47
ERCC1-201ENST00000013807 RPS6KA5O75582 802 aa17.98■□□□□ 0.47
ERCC1-201ENST00000013807 IL9P15248 144 aa17.98■□□□□ 0.47
ERCC1-201ENST00000013807 FAM189BP81408 668 aa17.98■□□□□ 0.47
ERCC1-201ENST00000013807 HYAL1Q12794 435 aa17.98■□□□□ 0.47
ERCC1-201ENST00000013807 TOB2Q14106 344 aaPredicted RBP17.98■□□□□ 0.47
ERCC1-201ENST00000013807 SLC24A5Q71RS6 500 aa17.98■□□□□ 0.47
ERCC1-201ENST00000013807 SPPL3Q8TCT6 385 aa17.98■□□□□ 0.47
ERCC1-201ENST00000013807 ZNF274Q96GC6 653 aaPredicted RBP17.98■□□□□ 0.47
ERCC1-201ENST00000013807 FAM167AQ96KS9 214 aa17.98■□□□□ 0.47
ERCC1-201ENST00000013807 LRFN3Q9BTN0 628 aa17.98■□□□□ 0.47
ERCC1-201ENST00000013807 C22orf23Q9BZE7 217 aa17.98■□□□□ 0.47
ERCC1-201ENST00000013807 FAM50BQ9Y247 325 aa17.98■□□□□ 0.47
ERCC1-201ENST00000013807 CYP3A7-CYP3A51PA0A087WV96 503 aa17.97■□□□□ 0.47
ERCC1-201ENST00000013807 WDR64B1ANS9 1081 aa17.97■□□□□ 0.47
ERCC1-201ENST00000013807 H3BQ06 376 aaPredicted RBP17.97■□□□□ 0.47
ERCC1-201ENST00000013807 M0R2N6 131 aa17.97■□□□□ 0.47
ERCC1-201ENST00000013807 MSH4O15457 936 aa17.97■□□□□ 0.47
ERCC1-201ENST00000013807 MGEA5O60502 916 aa17.97■□□□□ 0.47
ERCC1-201ENST00000013807 ITGB1P05556 798 aa17.97■□□□□ 0.47
ERCC1-201ENST00000013807 CYP3A7P24462 503 aa17.97■□□□□ 0.47
ERCC1-201ENST00000013807 NFX1Q12986 1120 aaKnown RBP17.97■□□□□ 0.47
ERCC1-201ENST00000013807 RASGRP4Q8TDF6 673 aa17.97■□□□□ 0.47
ERCC1-201ENST00000013807 SLC5A5Q92911 643 aa17.97■□□□□ 0.47
ERCC1-201ENST00000013807 SLC26A6Q9BXS9 759 aa17.97■□□□□ 0.47
ERCC1-201ENST00000013807 ELAC1Q9H777 363 aaKnown RBP17.97■□□□□ 0.47
ERCC1-201ENST00000013807 C11orf16Q9NQ32 467 aa17.97■□□□□ 0.47
ERCC1-201ENST00000013807 ST3GAL5Q9UNP4 418 aa17.97■□□□□ 0.47
ERCC1-201ENST00000013807 C19orf67A6NJJ6 358 aa17.96■□□□□ 0.47
ERCC1-201ENST00000013807 ZNF862O60290 1169 aa17.96■□□□□ 0.47
ERCC1-201ENST00000013807 SFNP31947 248 aa17.96■□□□□ 0.47
ERCC1-201ENST00000013807 ADAM15Q13444 863 aa17.96■□□□□ 0.47
ERCC1-201ENST00000013807 DSC3Q14574 896 aa17.96■□□□□ 0.47
ERCC1-201ENST00000013807 TMEM266Q2M3C6 531 aa17.96■□□□□ 0.47
ERCC1-201ENST00000013807 Q4G0T1 1027 aa17.96■□□□□ 0.47
ERCC1-201ENST00000013807 TMEM31Q5JXX7 168 aa17.96■□□□□ 0.47
ERCC1-201ENST00000013807 B3GNT9Q6UX72 402 aa17.96■□□□□ 0.47
ERCC1-201ENST00000013807 CKAP2LQ8IYA6 745 aa17.96■□□□□ 0.47
ERCC1-201ENST00000013807 ADAM2Q99965 735 aa17.96■□□□□ 0.47
ERCC1-201ENST00000013807 ALG13Q9NP73 1137 aaKnown RBP17.96■□□□□ 0.47
ERCC1-201ENST00000013807 DISC1Q9NRI5 854 aa17.96■□□□□ 0.47
ERCC1-201ENST00000013807 CLDND1Q9NY35 253 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms