RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Hmx1O70218 332 aa10.96□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Pla2g4bP0C871 782 aa10.96□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Kcnb1Q03717 857 aa10.96□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Drp2Q05AA6 957 aa10.96□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Ankrd40Q5SUE8 363 aa10.96□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Ccdc38Q8CDN8 563 aa10.96□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Celf3Q8CIN6 465 aa10.96□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Mss51Q9D5Z5 446 aa10.96□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Serpinb12Q9D7P9 423 aa10.96□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Akt3Q9WUA6 479 aa10.96□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Trappc11B2RXC1 1133 aa10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Vmn2r79E9Q067 851 aa10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Gm8909G3UXE9 396 aa10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 P01734 135 aa10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Nek1P51954 1203 aa10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 MafbP54841 323 aa10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Kcnma1Q08460 1209 aa10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Fscn1Q61553 493 aa10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Rbm41Q8JZV4 413 aa10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Vmn1r203Q8R273 311 aa10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Znf704Q9ERQ3 566 aa10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Mmel1Q9JLI3 765 aa10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 MtrA6H5Y3 1253 aa10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Heatr4E9Q357 955 aa10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Gm3138K7N754 218 aa10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Serpinb8O08800 374 aaKnown RBP10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Mgat3Q10470 538 aa10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Tsg101Q61187 391 aa10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Ift88Q61371 824 aa10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Acot5Q6Q2Z6 421 aa10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Ano10Q8BH79 659 aa10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Trmt13Q8BYH3 481 aa10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Kiaa0391Q8JZY4 584 aaKnown RBP10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Plcb4Q91UZ1 1175 aa10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Cfap45Q9D9U9 551 aa10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Smco2Q9DA21 347 aa10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Hmgn5Q9JL35 406 aa10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Hoxc13P50207 328 aa10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Tp53i13Q5F267 385 aa10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Fam183bQ5NC57 135 aa10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Rsad1Q5SUV1 442 aa10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Isy1Q69ZQ2 285 aaKnown RBP10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 TbataQ7TSD4 393 aa10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Ercc6lQ8BHK9 1240 aa10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Taf6lQ8R2K4 616 aa10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Cd2bp2Q9CWK3 342 aaKnown RBP10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Dctpp1Q9QY93 170 aa10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Fbxo16Q9QZM9 334 aa10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Knop1Q9Z2Q2 478 aaKnown RBP10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Trip11E9Q512 1976 aa10.95□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Cul4bA2A432 970 aaKnown RBP10.94□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Rnaseh1O70338 285 aa10.94□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Msh3P13705 1091 aa10.94□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Adcy7P51829 1099 aa10.94□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Ccdc162pQ0VG85 912 aa10.94□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Ppm1jQ149T7 507 aa10.94□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 DeptorQ570Y9 409 aa10.94□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Ano2Q8CFW1 1002 aa10.94□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Tmx1Q8VBT0 278 aa10.94□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Kif17Q99PW8 1038 aa10.94□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 SelenooQ9DBC0 667 aa10.94□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Gm5934D3Z4U6 212 aa10.94□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Gm9857F7CXR1 130 aa10.94□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Ccr1P51675 355 aa10.94□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Igbp1Q61249 340 aa10.94□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Nudt16Q6P3D0 195 aa10.94□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Sval3Q76I99 144 aa10.94□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Acot11Q8VHQ9 594 aa10.94□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Rtfdc1Q99K95 307 aa10.94□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Cep72Q9D3R3 646 aa10.94□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Klhl10Q9D5V2 608 aa10.94□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Eif4e3Q9DBB5 207 aa10.94□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Maged1Q9QYH6 775 aaKnown RBP10.94□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Gyg1Q9R062 333 aa10.94□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Myh9Q8VDD5 1960 aaKnown RBP10.94□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Klhdc7aA2APT9 773 aa10.94□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Svs3aF2Z472 265 aa10.94□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Vmn2r78K7N6U5 853 aa10.94□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Tgfbrap1Q3UR70 860 aa10.94□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Usp6nlQ80XC3 819 aa10.94□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Klhl30Q8C3F7 581 aa10.94□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Mettl24Q8CCB5 363 aa10.94□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Adcy3Q8VHH7 1145 aa10.94□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Rpn1Q91YQ5 608 aaKnown RBP10.94□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Cdr2lA2A6T1 465 aa10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Dnm2P39054 870 aaKnown RBP10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Hps5P59438 1126 aa10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Ric8aQ3TIR3 530 aa10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Capn13Q3UW68 665 aa10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 C6.1alQ7M757 291 aa10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Prpf31Q8CCF0 499 aaKnown RBP10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Bclaf1Q8K019 919 aaKnown RBP10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Txndc5Q91W90 417 aa10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Fam205aA2APU8 1308 aa10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Ace3D0G895 737 aa10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Gm973E9Q295 1059 aa10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Surf1P09925 306 aa10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Cyp2f2P33267 491 aa10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Tarbp2P97473 365 aa10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Casp7P97864 303 aa10.93□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 23 ms