RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Foxo6Q70KY4 559 aa17.47■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Tmem39bQ810L4 492 aa17.47■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Cyp26b1Q811W2 512 aa17.47■□□□□ 0.39
Ckap4-201ENSMUST00000053871 PolrmtQ8BKF1 1207 aaKnown RBP17.47■□□□□ 0.39
Ckap4-201ENSMUST00000053871 SucoQ8C341 1250 aa17.47■□□□□ 0.39
Ckap4-201ENSMUST00000053871 TxlnbQ8VBT1 685 aa17.47■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Capn9Q9D805 690 aa17.47■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Trappc11B2RXC1 1133 aa17.46■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Senp1P59110 640 aa17.46■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Nlrp4cQ3TKR3 982 aa17.46■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Agxt2Q3UEG6 513 aa17.46■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Anks6Q6GQX6 883 aa17.46■□□□□ 0.39
Ckap4-201ENSMUST00000053871 PodnQ7TQ62 611 aa17.46■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Btbd7Q8CFE5 1130 aa17.46■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Gmcl1Q920G9 524 aa17.46■□□□□ 0.39
Ckap4-201ENSMUST00000053871 CalcbQ99MP3 130 aa17.46■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Ccdc83Q9D4V3 305 aa17.46■□□□□ 0.39
Ckap4-201ENSMUST00000053871 SmapQ9R0P4 181 aaKnown RBP17.46■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Tph1P17532 447 aa17.46■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Fam107bQ3TGF2 131 aa17.46■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Tmc3Q7TQ69 1130 aa17.46■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Ptrh1Q8BW00 204 aa17.46■□□□□ 0.39
Ckap4-201ENSMUST00000053871 H6pdQ8CFX1 789 aa17.46■□□□□ 0.39
Ckap4-201ENSMUST00000053871 Col4a5Q63ZW6 1691 aa17.46■□□□□ 0.39
Ckap4-201ENSMUST00000053871 H2afzP0C0S6 128 aa17.46■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Trap1aP19473 224 aa17.46■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Surf6P70279 355 aaKnown RBP17.46■□□□□ 0.38
Ckap4-201ENSMUST00000053871 H2afvQ3THW5 128 aa17.46■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Serpinb6dQ3UWK8 375 aa17.46■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Tspyl3Q3UYP3 334 aa17.46■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Asap3Q5U464 904 aa17.46■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Ddx3xQ62167 662 aaKnown RBP17.46■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Naa15Q80UM3 865 aaKnown RBP17.46■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Gprc5cQ8K3J9 440 aa17.46■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Calml4Q91WQ9 153 aa17.46■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Gm28036V9GXJ1 658 aa17.46■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Skor2A7M7C7 1008 aa17.45■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Adgrg6Q6F3F9 1165 aa17.45■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Celf4Q7TSY6 486 aa17.45■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Phf20Q8BLG0 1010 aaKnown RBP17.45■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Usp38Q8BW70 1042 aa17.45■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Plcg2Q8CIH5 1265 aa17.45■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Tbx22Q8K402 517 aa17.45■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Drap1Q9D6N5 205 aa17.45■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Tmem79Q9D709 391 aa17.45■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Rexo2Q9D8S4 237 aa17.45■□□□□ 0.38
Ckap4-201ENSMUST00000053871 CsadQ9DBE0 493 aa17.45■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Usp31E9Q6Y8 1344 aa17.45■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Gdap1O88741 358 aa17.45■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Trim43cP86449 446 aa17.45■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Nr1d1Q3UV55 615 aa17.45■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Six2Q62232 296 aa17.45■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Ttc7aQ8BGB2 858 aa17.45■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Vps52Q8C754 723 aaKnown RBP17.45■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Slc18a1Q8R090 521 aa17.45■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Slc14a1Q8VHL0 384 aa17.45■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Themis2Q91YX0 663 aa17.45■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Gm45194A0A140LJG2 572 aa17.44■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Fyb2A2A995 729 aa17.44■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Cd68P31996 326 aa17.44■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Vgll3P85442 326 aa17.44■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Eepd1Q3TGW2 569 aa17.44■□□□□ 0.38
Ckap4-201ENSMUST00000053871 ItgaeQ60677 1167 aa17.44■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Zbtb7bQ64321 544 aa17.44■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Sh3d21Q7TSG5 549 aa17.44■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Pak2Q8CIN4 524 aa17.44■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Il17cQ8K4C5 194 aa17.44■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Tmem132aQ922P8 1018 aa17.44■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Scgb2b12S4R2L0 112 aa17.44■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Tnfaip8l3Q3TBL6 204 aa17.44■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Gdpd4Q3TT99 632 aa17.44■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Tfcp2l1Q3UNW5 479 aa17.44■□□□□ 0.38
Ckap4-201ENSMUST00000053871 D630036H23RikQ3UQD6 204 aa17.44■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Ice2Q3UZ18 988 aaKnown RBP17.44■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Slc10a5Q5PT54 434 aa17.44■□□□□ 0.38
Ckap4-201ENSMUST00000053871 AsphQ8BSY0 741 aa17.44■□□□□ 0.38
Ckap4-201ENSMUST00000053871 OtoaQ8K561 1137 aa17.44■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Dppa3Q8QZY3 150 aa17.44■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Hebp1Q9R257 190 aa17.44■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Flt1P35969 1333 aa17.44■□□□□ 0.38
Ckap4-201ENSMUST00000053871 VirmaA2AIV2 1811 aaKnown RBP17.44■□□□□ 0.38
Ckap4-201ENSMUST00000053871 LdhbP16125 334 aaKnown RBP17.44■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Fgfr4Q03142 799 aa17.44■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Mrgprx1Q8CIP3 322 aa17.44■□□□□ 0.38
Ckap4-201ENSMUST00000053871 PdxkQ8K183 312 aa17.44■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Med24Q99K74 987 aa17.44■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Mucl2P02815 138 aa17.43■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Tbc1d10cQ8C9V1 444 aa17.43■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Lsm14bQ8CGC4 385 aaKnown RBP17.43■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Osbpl1aQ91XL9 950 aa17.43■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Txnrd2Q9JLT4 524 aa17.43■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Fbf1A2A870 1173 aa17.43■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Heatr4E9Q357 955 aa17.43■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Slc16a2O70324 545 aa17.43■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Dlg4Q62108 724 aa17.43■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Senp6Q6P7W0 1132 aa17.43■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Fermt3Q8K1B8 665 aa17.43■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Defb15Q8R2I5 79 aa17.43■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Ifi202Q9R002 445 aa17.43■□□□□ 0.38
Ckap4-201ENSMUST00000053871 D1Pas1P16381 660 aa17.42■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 136.5 ms