RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 HHIPL2Q6UWX4 724 aa8.42□□□□□ -1.06
SCARB2-224ENST00000640880 SHISA5Q8N114 240 aa8.42□□□□□ -1.06
SCARB2-224ENST00000640880 TEKT5Q96M29 485 aa8.42□□□□□ -1.06
SCARB2-224ENST00000640880 ZDHHC5Q9C0B5 715 aa8.42□□□□□ -1.06
SCARB2-224ENST00000640880 NMRK2Q9NPI5 230 aa8.42□□□□□ -1.06
SCARB2-224ENST00000640880 CCM2LQ9NUG4 571 aaPredicted RBP8.42□□□□□ -1.06
SCARB2-224ENST00000640880 FAM50BQ9Y247 325 aa8.42□□□□□ -1.06
SCARB2-224ENST00000640880 PCDHA11Q9Y5I1 949 aa8.42□□□□□ -1.06
SCARB2-224ENST00000640880 U3KQE9 123 aa8.42□□□□□ -1.06
SCARB2-224ENST00000640880 CNTNAP5Q8WYK1 1306 aa8.42□□□□□ -1.06
SCARB2-224ENST00000640880 KIF15Q9NS87 1388 aa8.42□□□□□ -1.06
SCARB2-224ENST00000640880 ZC3H13Q5T200 1668 aaKnown RBP8.41□□□□□ -1.06
SCARB2-224ENST00000640880 TMEM82A0PJX8 343 aa8.41□□□□□ -1.06
SCARB2-224ENST00000640880 H7BY64 318 aa8.41□□□□□ -1.06
SCARB2-224ENST00000640880 ANP32CO43423 234 aa8.41□□□□□ -1.06
SCARB2-224ENST00000640880 KDM1AO60341 852 aa8.41□□□□□ -1.06
SCARB2-224ENST00000640880 HIP1RO75146 1068 aa8.41□□□□□ -1.06
SCARB2-224ENST00000640880 ZRANB2O95218 330 aaKnown RBP eCLIP8.41□□□□□ -1.06
SCARB2-224ENST00000640880 FPR2P25090 351 aa8.41□□□□□ -1.06
SCARB2-224ENST00000640880 SPIRE1Q08AE8 756 aa8.41□□□□□ -1.06
SCARB2-224ENST00000640880 IFIT1BQ5T764 474 aaKnown RBP8.41□□□□□ -1.06
SCARB2-224ENST00000640880 GPR158Q5T848 1215 aa8.41□□□□□ -1.06
SCARB2-224ENST00000640880 ANGEL2Q5VTE6 544 aaKnown RBP8.41□□□□□ -1.06
SCARB2-224ENST00000640880 CEP68Q76N32 757 aa8.41□□□□□ -1.06
SCARB2-224ENST00000640880 TXNRD3Q86VQ6 643 aa8.41□□□□□ -1.06
SCARB2-224ENST00000640880 NOSTRINQ8IVI9 506 aa8.41□□□□□ -1.06
SCARB2-224ENST00000640880 TGFBRAP1Q8WUH2 860 aa8.41□□□□□ -1.06
SCARB2-224ENST00000640880 UBE2FQ969M7 185 aa8.41□□□□□ -1.06
SCARB2-224ENST00000640880 EVI5LQ96CN4 794 aa8.41□□□□□ -1.06
SCARB2-224ENST00000640880 TRMT2BQ96GJ1 504 aaKnown RBP8.41□□□□□ -1.06
SCARB2-224ENST00000640880 HSPA12BQ96MM6 686 aa8.41□□□□□ -1.06
SCARB2-224ENST00000640880 CLTCQ00610 1675 aaKnown RBP8.4□□□□□ -1.06
SCARB2-224ENST00000640880 GCC2Q8IWJ2 1684 aa8.4□□□□□ -1.06
SCARB2-224ENST00000640880 ADGRL2O95490 1459 aa8.4□□□□□ -1.06
SCARB2-224ENST00000640880 ERBINQ96RT1 1412 aa8.4□□□□□ -1.06
SCARB2-224ENST00000640880 DHX29Q7Z478 1369 aaKnown RBP8.4□□□□□ -1.06
SCARB2-224ENST00000640880 TCRBV5S4A2TA0A5A2 114 aa8.4□□□□□ -1.06
SCARB2-224ENST00000640880 HMX2A2RU54 273 aa8.4□□□□□ -1.06
SCARB2-224ENST00000640880 LCHNA4D1U4 455 aa8.4□□□□□ -1.06
SCARB2-224ENST00000640880 APAF1O14727 1248 aa8.4□□□□□ -1.06
SCARB2-224ENST00000640880 DEKP35659 375 aaKnown RBP8.4□□□□□ -1.06
SCARB2-224ENST00000640880 OXCT1P55809 520 aa8.4□□□□□ -1.06
SCARB2-224ENST00000640880 RBM10P98175 930 aaKnown RBP8.4□□□□□ -1.06
SCARB2-224ENST00000640880 CYP27A1Q02318 531 aa8.4□□□□□ -1.06
SCARB2-224ENST00000640880 PDCD1Q15116 288 aa8.4□□□□□ -1.06
SCARB2-224ENST00000640880 RRP12Q5JTH9 1297 aaKnown RBP8.4□□□□□ -1.06
SCARB2-224ENST00000640880 TTLL7Q6ZT98 887 aa8.4□□□□□ -1.06
SCARB2-224ENST00000640880 EP400NLQ6ZTU2 488 aa8.4□□□□□ -1.06
SCARB2-224ENST00000640880 APBB1IPQ7Z5R6 666 aaPredicted RBP8.4□□□□□ -1.06
SCARB2-224ENST00000640880 TEX2Q8IWB9 1127 aa8.4□□□□□ -1.06
SCARB2-224ENST00000640880 SPACA3Q8IXA5 215 aa8.4□□□□□ -1.06
SCARB2-224ENST00000640880 FBXL6Q8N531 539 aa8.4□□□□□ -1.06
SCARB2-224ENST00000640880 BEND7Q8N7W2 519 aaPredicted RBP8.4□□□□□ -1.06
SCARB2-224ENST00000640880 FAM181AQ8N9Y4 354 aa8.4□□□□□ -1.06
SCARB2-224ENST00000640880 TTC17Q96AE7 1141 aa8.4□□□□□ -1.06
SCARB2-224ENST00000640880 RUNDC1Q96C34 613 aa8.4□□□□□ -1.06
SCARB2-224ENST00000640880 ZMAT4Q9H898 229 aa8.4□□□□□ -1.06
SCARB2-224ENST00000640880 SP110Q9HB58 689 aa8.4□□□□□ -1.06
SCARB2-224ENST00000640880 ERVK13-1Q9NX77 482 aa8.4□□□□□ -1.06
SCARB2-224ENST00000640880 MARCH2Q9P0N8 246 aa8.4□□□□□ -1.06
SCARB2-224ENST00000640880 ADGRE2Q9UHX3 823 aa8.4□□□□□ -1.06
SCARB2-224ENST00000640880 TAGLN3Q9UI15 199 aa8.4□□□□□ -1.06
SCARB2-224ENST00000640880 MROH2AA6NES4 1674 aa8.4□□□□□ -1.07
SCARB2-224ENST00000640880 FAM135AQ9P2D6 1515 aa8.39□□□□□ -1.07
SCARB2-224ENST00000640880 CNTLNQ9NXG0 1405 aa8.39□□□□□ -1.07
SCARB2-224ENST00000640880 ANO9A1A5B4 782 aa8.39□□□□□ -1.07
SCARB2-224ENST00000640880 MAN2B1O00754 1011 aa8.39□□□□□ -1.07
SCARB2-224ENST00000640880 SCDO00767 359 aa8.39□□□□□ -1.07
SCARB2-224ENST00000640880 NKRFO15226 690 aaKnown RBP eCLIP8.39□□□□□ -1.07
SCARB2-224ENST00000640880 PTX3P26022 381 aaPredicted RBP8.39□□□□□ -1.07
SCARB2-224ENST00000640880 RPL10P27635 214 aaKnown RBP8.39□□□□□ -1.07
SCARB2-224ENST00000640880 COL8A1P27658 744 aa8.39□□□□□ -1.07
SCARB2-224ENST00000640880 MORC3Q14149 939 aa8.39□□□□□ -1.07
SCARB2-224ENST00000640880 GALEQ14376 348 aa8.39□□□□□ -1.07
SCARB2-224ENST00000640880 SAFBQ15424 915 aaKnown RBP eCLIP8.39□□□□□ -1.07
SCARB2-224ENST00000640880 CPZQ66K79 652 aa8.39□□□□□ -1.07
SCARB2-224ENST00000640880 GGT6Q6P531 493 aa8.39□□□□□ -1.07
SCARB2-224ENST00000640880 WAPLQ7Z5K2 1190 aa8.39□□□□□ -1.07
SCARB2-224ENST00000640880 SPICE1Q8N0Z3 855 aa8.39□□□□□ -1.07
SCARB2-224ENST00000640880 E2F7Q96AV8 911 aa8.39□□□□□ -1.07
SCARB2-224ENST00000640880 C7orf69Q9H7B7 122 aa8.39□□□□□ -1.07
SCARB2-224ENST00000640880 MAN1C1Q9NR34 630 aa8.39□□□□□ -1.07
SCARB2-224ENST00000640880 RRP7BPQ9NSQ0 103 aa8.39□□□□□ -1.07
SCARB2-224ENST00000640880 GULP1Q9UBP9 304 aa8.39□□□□□ -1.07
SCARB2-224ENST00000640880 INTUQ9ULD6 942 aa8.39□□□□□ -1.07
SCARB2-224ENST00000640880 RNF17Q9BXT8 1623 aaKnown RBP8.39□□□□□ -1.07
SCARB2-224ENST00000640880 SETD5Q9C0A6 1442 aa8.38□□□□□ -1.07
SCARB2-224ENST00000640880 ROCK1Q13464 1354 aa8.38□□□□□ -1.07
SCARB2-224ENST00000640880 KANK1Q14678 1352 aa8.38□□□□□ -1.07
SCARB2-224ENST00000640880 RAB3GAP2Q9H2M9 1393 aa8.38□□□□□ -1.07
SCARB2-224ENST00000640880 CEP152O94986 1710 aa8.38□□□□□ -1.07
SCARB2-224ENST00000640880 AP1G1O43747 822 aa8.38□□□□□ -1.07
SCARB2-224ENST00000640880 FOSP01100 380 aaPredicted RBP8.38□□□□□ -1.07
SCARB2-224ENST00000640880 PHKG2P15735 406 aa8.38□□□□□ -1.07
SCARB2-224ENST00000640880 ZRSR2Q15696 482 aaKnown RBP8.38□□□□□ -1.07
SCARB2-224ENST00000640880 HABP4Q5JVS0 413 aaKnown RBP8.38□□□□□ -1.07
SCARB2-224ENST00000640880 ESRP1Q6NXG1 681 aaKnown RBP8.38□□□□□ -1.07
SCARB2-224ENST00000640880 FRMD7Q6ZUT3 714 aa8.38□□□□□ -1.07
SCARB2-224ENST00000640880 OTOP3Q7RTS5 596 aa8.38□□□□□ -1.07
SCARB2-224ENST00000640880 THAP5Q7Z6K1 395 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms