RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 LINC01599Q8WXQ3 324 aa21.03■□□□□ 0.96
CLN6-220ENST00000637450 CLP1Q92989 425 aaKnown RBP21.03■□□□□ 0.96
CLN6-220ENST00000637450 TRPV2Q9Y5S1 764 aa21.03■□□□□ 0.96
CLN6-220ENST00000637450 SMIM35A0A1B0GVV1 85 aa21.02■□□□□ 0.96
CLN6-220ENST00000637450 M0QZ92 97 aa21.02■□□□□ 0.96
CLN6-220ENST00000637450 DHX15O43143 795 aaKnown RBP21.02■□□□□ 0.96
CLN6-220ENST00000637450 SCG2P13521 617 aa21.02■□□□□ 0.96
CLN6-220ENST00000637450 HSPA4P34932 840 aa21.02■□□□□ 0.96
CLN6-220ENST00000637450 CTNNB1P35222 781 aa21.02■□□□□ 0.96
CLN6-220ENST00000637450 TMEM62Q0P6H9 643 aa21.02■□□□□ 0.96
CLN6-220ENST00000637450 TCEAL5Q5H9L2 206 aa21.02■□□□□ 0.96
CLN6-220ENST00000637450 PLA2G4DQ86XP0 818 aa21.02■□□□□ 0.96
CLN6-220ENST00000637450 CRIPAKQ8N1N5 446 aa21.02■□□□□ 0.96
CLN6-220ENST00000637450 BRF1Q92994 677 aa21.02■□□□□ 0.96
CLN6-220ENST00000637450 JAKMIP1Q96N16 626 aaKnown RBP21.02■□□□□ 0.96
CLN6-220ENST00000637450 FTHL17Q9BXU8 183 aa21.02■□□□□ 0.96
CLN6-220ENST00000637450 CELF4Q9BZC1 486 aaKnown RBP21.02■□□□□ 0.96
CLN6-220ENST00000637450 ZMYND12Q9H0C1 365 aa21.02■□□□□ 0.96
CLN6-220ENST00000637450 RWDD3Q9Y3V2 267 aa21.02■□□□□ 0.96
CLN6-220ENST00000637450 ADGRA3Q8IWK6 1321 aa21.02■□□□□ 0.95
CLN6-220ENST00000637450 IGLV3-22A0A075B6J6 115 aa21.01■□□□□ 0.95
CLN6-220ENST00000637450 ESYT2A0FGR8 921 aa21.01■□□□□ 0.95
CLN6-220ENST00000637450 DDX39AO00148 427 aaKnown RBP21.01■□□□□ 0.95
CLN6-220ENST00000637450 DGKIO75912 1065 aa21.01■□□□□ 0.95
CLN6-220ENST00000637450 PKN1Q16512 942 aa21.01■□□□□ 0.95
CLN6-220ENST00000637450 FBXL16Q8N461 479 aa21.01■□□□□ 0.95
CLN6-220ENST00000637450 NEK9Q8TD19 979 aa21.01■□□□□ 0.95
CLN6-220ENST00000637450 NSUN3Q9H649 340 aaKnown RBP21.01■□□□□ 0.95
CLN6-220ENST00000637450 EPHX3Q9H6B9 360 aa21.01■□□□□ 0.95
CLN6-220ENST00000637450 PADI3Q9ULW8 664 aa21.01■□□□□ 0.95
CLN6-220ENST00000637450 SNX14Q9Y5W7 946 aa21.01■□□□□ 0.95
CLN6-220ENST00000637450 IGSF9BQ9UPX0 1349 aa21.01■□□□□ 0.95
CLN6-220ENST00000637450 KDM3AQ9Y4C1 1321 aa21.01■□□□□ 0.95
CLN6-220ENST00000637450 BACH1O14867 736 aa21■□□□□ 0.95
CLN6-220ENST00000637450 ADAMTS3O15072 1205 aa21■□□□□ 0.95
CLN6-220ENST00000637450 PRPF3O43395 683 aaKnown RBP21■□□□□ 0.95
CLN6-220ENST00000637450 HBP1O60381 514 aa21■□□□□ 0.95
CLN6-220ENST00000637450 KLRC1P26715 233 aa21■□□□□ 0.95
CLN6-220ENST00000637450 BTG3Q14201 252 aaPredicted RBP21■□□□□ 0.95
CLN6-220ENST00000637450 COL19A1Q14993 1142 aa21■□□□□ 0.95
CLN6-220ENST00000637450 FAM160B1Q5W0V3 765 aa21■□□□□ 0.95
CLN6-220ENST00000637450 MCTP2Q6DN12 878 aa21■□□□□ 0.95
CLN6-220ENST00000637450 CCDC60Q8IWA6 550 aaPredicted RBP21■□□□□ 0.95
CLN6-220ENST00000637450 ATP8B4Q8TF62 1192 aa21■□□□□ 0.95
CLN6-220ENST00000637450 C11orf84Q9BUA3 381 aaPredicted RBP21■□□□□ 0.95
CLN6-220ENST00000637450 C6orf50Q9HD87 102 aa21■□□□□ 0.95
CLN6-220ENST00000637450 CD320Q9NPF0 282 aa21■□□□□ 0.95
CLN6-220ENST00000637450 RAPGEFL1Q9UHV5 662 aa21■□□□□ 0.95
CLN6-220ENST00000637450 IPO5O00410 1097 aaKnown RBP20.99■□□□□ 0.95
CLN6-220ENST00000637450 GRM6O15303 877 aa20.99■□□□□ 0.95
CLN6-220ENST00000637450 KRT76Q01546 638 aa20.99■□□□□ 0.95
CLN6-220ENST00000637450 PAK2Q13177 524 aa20.99■□□□□ 0.95
CLN6-220ENST00000637450 PUS10Q3MIT2 529 aaKnown RBP20.99■□□□□ 0.95
CLN6-220ENST00000637450 PTCRAQ6ISU1 281 aaPredicted RBP20.99■□□□□ 0.95
CLN6-220ENST00000637450 SWSAP1Q6NVH7 229 aa20.99■□□□□ 0.95
CLN6-220ENST00000637450 BLOC1S2Q6QNY1 142 aa20.99■□□□□ 0.95
CLN6-220ENST00000637450 FAM178BQ8IXR5 827 aa20.99■□□□□ 0.95
CLN6-220ENST00000637450 CCDC12Q8WUD4 166 aaPredicted RBP20.99■□□□□ 0.95
CLN6-220ENST00000637450 PABPC5Q96DU9 382 aaKnown RBP20.99■□□□□ 0.95
CLN6-220ENST00000637450 AGXT2Q9BYV1 514 aa20.99■□□□□ 0.95
CLN6-220ENST00000637450 LMAN2LQ9H0V9 348 aa20.99■□□□□ 0.95
CLN6-220ENST00000637450 ZNF302Q9NR11 478 aa20.99■□□□□ 0.95
CLN6-220ENST00000637450 TTC3P53804 2025 aa20.99■□□□□ 0.95
CLN6-220ENST00000637450 NID2Q14112 1375 aa20.98■□□□□ 0.95
CLN6-220ENST00000637450 GRXCR2A6NFK2 248 aa20.98■□□□□ 0.95
CLN6-220ENST00000637450 ATP4AP20648 1035 aa20.98■□□□□ 0.95
CLN6-220ENST00000637450 RPS6KB1P23443 525 aa20.98■□□□□ 0.95
CLN6-220ENST00000637450 GNA11P29992 359 aa20.98■□□□□ 0.95
CLN6-220ENST00000637450 ZNF484Q5JVG2 852 aa20.98■□□□□ 0.95
CLN6-220ENST00000637450 MIS18BP1Q6P0N0 1132 aa20.98■□□□□ 0.95
CLN6-220ENST00000637450 PDXDC2PQ6P474 469 aa20.98■□□□□ 0.95
CLN6-220ENST00000637450 NPAS4Q8IUM7 802 aa20.98■□□□□ 0.95
CLN6-220ENST00000637450 KIAA0319LQ8IZA0 1049 aa20.98■□□□□ 0.95
CLN6-220ENST00000637450 REXO1Q8N1G1 1221 aaKnown RBP20.98■□□□□ 0.95
CLN6-220ENST00000637450 KHSRPQ92945 711 aaKnown RBP eCLIP20.98■□□□□ 0.958e-8■□□□□ 8.3
CLN6-220ENST00000637450 ZNF577Q9BSK1 485 aa20.98■□□□□ 0.95
CLN6-220ENST00000637450 PLVAPQ9BX97 442 aa20.98■□□□□ 0.95
CLN6-220ENST00000637450 TBC1D22BQ9NU19 505 aa20.98■□□□□ 0.95
CLN6-220ENST00000637450 ZBTB42B2RXF5 422 aa20.97■□□□□ 0.95
CLN6-220ENST00000637450 H3BQ06 376 aaPredicted RBP20.97■□□□□ 0.95
CLN6-220ENST00000637450 NCK2O43639 380 aa20.97■□□□□ 0.95
CLN6-220ENST00000637450 IL9P15248 144 aa20.97■□□□□ 0.95
CLN6-220ENST00000637450 NTRK3Q16288 839 aa20.97■□□□□ 0.95
CLN6-220ENST00000637450 FAM43BQ6ZT52 329 aaPredicted RBP20.97■□□□□ 0.95
CLN6-220ENST00000637450 CMTR2Q8IYT2 770 aaKnown RBP20.97■□□□□ 0.95
CLN6-220ENST00000637450 PHKBQ93100 1093 aa20.97■□□□□ 0.95
CLN6-220ENST00000637450 UIMC1Q96RL1 719 aa20.97■□□□□ 0.95
CLN6-220ENST00000637450 TMX1Q9H3N1 280 aa20.97■□□□□ 0.95
CLN6-220ENST00000637450 MYO7AQ13402 2215 aa20.97■□□□□ 0.95
CLN6-220ENST00000637450 COL1A2P08123 1366 aa20.97■□□□□ 0.95
CLN6-220ENST00000637450 STAG3L1P0CL83 205 aa20.96■□□□□ 0.95
CLN6-220ENST00000637450 CIITAP33076 1130 aa20.96■□□□□ 0.95
CLN6-220ENST00000637450 SETQ01105 290 aaPredicted RBP20.96■□□□□ 0.95
CLN6-220ENST00000637450 AKAP17AQ02040 695 aaKnown RBP20.96■□□□□ 0.95
CLN6-220ENST00000637450 TMEM266Q2M3C6 531 aa20.96■□□□□ 0.95
CLN6-220ENST00000637450 ZNF746Q6NUN9 644 aaPredicted RBP20.96■□□□□ 0.95
CLN6-220ENST00000637450 GJD3Q8N144 294 aa20.96■□□□□ 0.95
CLN6-220ENST00000637450 CDHR5Q9HBB8 845 aa20.96■□□□□ 0.95
CLN6-220ENST00000637450 PLAGL2Q9UPG8 496 aa20.96■□□□□ 0.95
CLN6-220ENST00000637450 MAFBQ9Y5Q3 323 aaPredicted RBP20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms