RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 SCFD2Q8WU76 684 aa17.06■□□□□ 0.32
CLN6-219ENST00000637329 SOCS4Q8WXH5 440 aa17.06■□□□□ 0.32
CLN6-219ENST00000637329 PPP1R9BQ96SB3 815 aa17.06■□□□□ 0.32
CLN6-219ENST00000637329 ANKEF1Q9NU02 776 aa17.06■□□□□ 0.32
CLN6-219ENST00000637329 PANK4Q9NVE7 773 aa17.06■□□□□ 0.32
CLN6-219ENST00000637329 TRPA1O75762 1119 aa17.05■□□□□ 0.32
CLN6-219ENST00000637329 KIF20AO95235 890 aa17.05■□□□□ 0.32
CLN6-219ENST00000637329 HOXC6P09630 235 aa17.05■□□□□ 0.32
CLN6-219ENST00000637329 IDEP14735 1019 aa17.05■□□□□ 0.32
CLN6-219ENST00000637329 YWHABP31946 246 aaKnown RBP17.05■□□□□ 0.32
CLN6-219ENST00000637329 SP2Q02086 613 aa17.05■□□□□ 0.32
CLN6-219ENST00000637329 CRHR2Q13324 411 aa17.05■□□□□ 0.32
CLN6-219ENST00000637329 GIT2Q14161 759 aa17.05■□□□□ 0.32
CLN6-219ENST00000637329 TTLL4Q14679 1199 aa17.05■□□□□ 0.32
CLN6-219ENST00000637329 FAM26FQ5R3K3 315 aa17.05■□□□□ 0.32
CLN6-219ENST00000637329 SPATA1Q5VX52 437 aa17.05■□□□□ 0.32
CLN6-219ENST00000637329 RINT1Q6NUQ1 792 aa17.05■□□□□ 0.32
CLN6-219ENST00000637329 DPP9Q86TI2 863 aa17.05■□□□□ 0.32
CLN6-219ENST00000637329 GUF1Q8N442 669 aaKnown RBP17.05■□□□□ 0.32
CLN6-219ENST00000637329 PIGOQ8TEQ8 1089 aa17.05■□□□□ 0.32
CLN6-219ENST00000637329 DHTKD1Q96HY7 919 aaPredicted RBP17.05■□□□□ 0.32
CLN6-219ENST00000637329 MAML3Q96JK9 1138 aa17.05■□□□□ 0.32
CLN6-219ENST00000637329 CCDC43Q96MW1 224 aaKnown RBP17.05■□□□□ 0.32
CLN6-219ENST00000637329 REEP2Q9BRK0 252 aa17.05■□□□□ 0.32
CLN6-219ENST00000637329 SEL1LQ9UBV2 794 aa17.05■□□□□ 0.32
CLN6-219ENST00000637329 CTNND2Q9UQB3 1225 aa17.05■□□□□ 0.32
CLN6-219ENST00000637329 GDAQ9Y2T3 454 aa17.05■□□□□ 0.32
CLN6-219ENST00000637329 ARID2Q68CP9 1835 aa17.05■□□□□ 0.32
CLN6-219ENST00000637329 IGKV6D-21A0A0A0MT36 114 aa17.04■□□□□ 0.32
CLN6-219ENST00000637329 RBM47A0AV96 593 aaKnown RBP17.04■□□□□ 0.32
CLN6-219ENST00000637329 BICDL2A1A5D9 508 aa17.04■□□□□ 0.32
CLN6-219ENST00000637329 GGPS1O95749 300 aa17.04■□□□□ 0.32
CLN6-219ENST00000637329 PRCPP42785 496 aa17.04■□□□□ 0.32
CLN6-219ENST00000637329 RARRES1P49788 294 aa17.04■□□□□ 0.32
CLN6-219ENST00000637329 MAP2K5Q13163 448 aa17.04■□□□□ 0.32
CLN6-219ENST00000637329 UGCGQ16739 394 aa17.04■□□□□ 0.32
CLN6-219ENST00000637329 CCDC62Q6P9F0 684 aa17.04■□□□□ 0.32
CLN6-219ENST00000637329 C1orf186Q6ZWK4 172 aa17.04■□□□□ 0.32
CLN6-219ENST00000637329 CYFIP1Q7L576 1253 aa17.04■□□□□ 0.32
CLN6-219ENST00000637329 FBXO16Q8IX29 292 aaPredicted RBP17.04■□□□□ 0.32
CLN6-219ENST00000637329 KIAA0895Q8NCT3 520 aa17.04■□□□□ 0.32
CLN6-219ENST00000637329 RUSC1Q9BVN2 902 aa17.04■□□□□ 0.32
CLN6-219ENST00000637329 OLFML3Q9NRN5 406 aa17.04■□□□□ 0.32
CLN6-219ENST00000637329 DDX41Q9UJV9 622 aaKnown RBP17.04■□□□□ 0.32
CLN6-219ENST00000637329 NFE2L3Q9Y4A8 694 aa17.04■□□□□ 0.32
CLN6-219ENST00000637329 COL4A3BPQ9Y5P4 624 aa17.04■□□□□ 0.32
CLN6-219ENST00000637329 ZNF131P52739 623 aa17.03■□□□□ 0.32
CLN6-219ENST00000637329 STK4Q13043 487 aa17.03■□□□□ 0.32
CLN6-219ENST00000637329 HABP4Q5JVS0 413 aaKnown RBP17.03■□□□□ 0.32
CLN6-219ENST00000637329 CELF3Q5SZQ8 465 aaKnown RBP17.03■□□□□ 0.32
CLN6-219ENST00000637329 KLHL10Q6JEL2 608 aa17.03■□□□□ 0.32
CLN6-219ENST00000637329 OTUD6AQ7L8S5 288 aa17.03■□□□□ 0.32
CLN6-219ENST00000637329 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.03■□□□□ 0.32
CLN6-219ENST00000637329 CCDC60Q8IWA6 550 aaPredicted RBP17.03■□□□□ 0.32
CLN6-219ENST00000637329 AFAP1L1Q8TED9 768 aa17.03■□□□□ 0.32
CLN6-219ENST00000637329 NELFBQ8WX92 580 aa17.03■□□□□ 0.32
CLN6-219ENST00000637329 RNF186Q9NXI6 227 aa17.03■□□□□ 0.32
CLN6-219ENST00000637329 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.03■□□□□ 0.32
CLN6-219ENST00000637329 GABBR1Q9UBS5 961 aa17.03■□□□□ 0.32
CLN6-219ENST00000637329 DOCK5Q9H7D0 1870 aa17.03■□□□□ 0.32
CLN6-219ENST00000637329 UBE4BO95155 1302 aa17.02■□□□□ 0.32
CLN6-219ENST00000637329 EMSYQ7Z589 1322 aa17.02■□□□□ 0.32
CLN6-219ENST00000637329 ARIH2O95376 493 aa17.02■□□□□ 0.32
CLN6-219ENST00000637329 ADCY5O95622 1261 aa17.02■□□□□ 0.32
CLN6-219ENST00000637329 ZNF18P17022 549 aa17.02■□□□□ 0.32
CLN6-219ENST00000637329 CCNE1P24864 410 aa17.02■□□□□ 0.32
CLN6-219ENST00000637329 CDC25BP30305 580 aa17.02■□□□□ 0.32
CLN6-219ENST00000637329 PRKCEQ02156 737 aa17.02■□□□□ 0.32
CLN6-219ENST00000637329 XKR3Q5GH77 459 aa17.02■□□□□ 0.32
CLN6-219ENST00000637329 FAM160B1Q5W0V3 765 aa17.02■□□□□ 0.32
CLN6-219ENST00000637329 EEPD1Q7L9B9 569 aa17.02■□□□□ 0.32
CLN6-219ENST00000637329 TRMT44Q8IYL2 757 aaKnown RBP17.02■□□□□ 0.32
CLN6-219ENST00000637329 NOC3LQ8WTT2 800 aaKnown RBP17.02■□□□□ 0.32
CLN6-219ENST00000637329 USP6NLQ92738 828 aa17.02■□□□□ 0.32
CLN6-219ENST00000637329 EMID1Q96A84 441 aaPredicted RBP17.02■□□□□ 0.32
CLN6-219ENST00000637329 MRFAP1L1Q96HT8 127 aa17.02■□□□□ 0.32
CLN6-219ENST00000637329 MED15Q96RN5 788 aa17.02■□□□□ 0.32
CLN6-219ENST00000637329 APBA2Q99767 749 aa17.02■□□□□ 0.32
CLN6-219ENST00000637329 TINF2Q9BSI4 451 aa17.02■□□□□ 0.32
CLN6-219ENST00000637329 CFHR5Q9BXR6 569 aa17.02■□□□□ 0.32
CLN6-219ENST00000637329 KATNBL1Q9H079 304 aa17.02■□□□□ 0.32
CLN6-219ENST00000637329 HSD3B7Q9H2F3 369 aa17.02■□□□□ 0.32
CLN6-219ENST00000637329 ABHD16BQ9H3Z7 469 aa17.02■□□□□ 0.32
CLN6-219ENST00000637329 MLXIPQ9HAP2 919 aa17.02■□□□□ 0.32
CLN6-219ENST00000637329 ZNF302Q9NR11 478 aa17.02■□□□□ 0.32
CLN6-219ENST00000637329 PPME1Q9Y570 386 aa17.02■□□□□ 0.32
CLN6-219ENST00000637329 PCDHA2Q9Y5H9 948 aa17.02■□□□□ 0.32
CLN6-219ENST00000637329 MAFBQ9Y5Q3 323 aaPredicted RBP17.02■□□□□ 0.32
CLN6-219ENST00000637329 BACH1O14867 736 aa17.01■□□□□ 0.31
CLN6-219ENST00000637329 FAM13AO94988 1023 aa17.01■□□□□ 0.31
CLN6-219ENST00000637329 TXNP10599 105 aaKnown RBP17.01■□□□□ 0.31
CLN6-219ENST00000637329 RGS2P41220 211 aa17.01■□□□□ 0.31
CLN6-219ENST00000637329 LRRC63Q05C16 580 aa17.01■□□□□ 0.31
CLN6-219ENST00000637329 SPAG1Q07617 926 aa17.01■□□□□ 0.31
CLN6-219ENST00000637329 HERC4Q5GLZ8 1057 aaPredicted RBP17.01■□□□□ 0.31
CLN6-219ENST00000637329 CDKAL1Q5VV42 579 aa17.01■□□□□ 0.31
CLN6-219ENST00000637329 OLFML2BQ68BL8 750 aa17.01■□□□□ 0.31
CLN6-219ENST00000637329 SWSAP1Q6NVH7 229 aa17.01■□□□□ 0.31
CLN6-219ENST00000637329 TAPT1Q6NXT6 567 aa17.01■□□□□ 0.31
CLN6-219ENST00000637329 PADI6Q6TGC4 694 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms