RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 DCAF8Q5TAQ9 597 aa12.34□□□□□ -0.43
VARS2-213ENST00000625423 TCERG1LQ5VWI1 586 aa12.34□□□□□ -0.43
VARS2-213ENST00000625423 MOXD1Q6UVY6 613 aa12.34□□□□□ -0.43
VARS2-213ENST00000625423 CASKIN2Q8WXE0 1202 aa12.34□□□□□ -0.43
VARS2-213ENST00000625423 KCNQ5Q9NR82 932 aa12.34□□□□□ -0.43
VARS2-213ENST00000625423 ARFGEF1Q9Y6D6 1849 aa12.34□□□□□ -0.43
VARS2-213ENST00000625423 NOP2P46087 812 aaKnown RBP12.34□□□□□ -0.43
VARS2-213ENST00000625423 CRKP46108 304 aa12.34□□□□□ -0.43
VARS2-213ENST00000625423 KCTD16Q68DU8 428 aa12.34□□□□□ -0.43
VARS2-213ENST00000625423 KLHL7Q8IXQ5 586 aa12.34□□□□□ -0.43
VARS2-213ENST00000625423 SH2D3CQ8N5H7 860 aa12.34□□□□□ -0.43
VARS2-213ENST00000625423 USP38Q8NB14 1042 aa12.34□□□□□ -0.43
VARS2-213ENST00000625423 RBM46Q8TBY0 533 aaKnown RBP12.34□□□□□ -0.43
VARS2-213ENST00000625423 TAF4BQ92750 862 aa12.34□□□□□ -0.43
VARS2-213ENST00000625423 MKL1Q969V6 931 aa12.34□□□□□ -0.43
VARS2-213ENST00000625423 LENG9Q96B70 501 aa12.34□□□□□ -0.43
VARS2-213ENST00000625423 RAD51CO43502 376 aa12.33□□□□□ -0.43
VARS2-213ENST00000625423 XRCC5P13010 732 aaKnown RBP12.33□□□□□ -0.43
VARS2-213ENST00000625423 CCT5P48643 541 aa12.33□□□□□ -0.43
VARS2-213ENST00000625423 CASP4P49662 377 aa12.33□□□□□ -0.43
VARS2-213ENST00000625423 RPS6KA1Q15418 735 aa12.33□□□□□ -0.43
VARS2-213ENST00000625423 GBP6Q6ZN66 633 aa12.33□□□□□ -0.43
VARS2-213ENST00000625423 EPM2AIP1Q7L775 607 aaPredicted RBP12.33□□□□□ -0.43
VARS2-213ENST00000625423 SIAH1Q8IUQ4 282 aa12.33□□□□□ -0.43
VARS2-213ENST00000625423 PLCB1Q9NQ66 1216 aa12.33□□□□□ -0.43
VARS2-213ENST00000625423 NYAP2Q9P242 653 aa12.33□□□□□ -0.43
VARS2-213ENST00000625423 ZNF219Q9P2Y4 722 aaPredicted RBP12.33□□□□□ -0.43
VARS2-213ENST00000625423 THSD7AQ9UPZ6 1657 aa12.33□□□□□ -0.44
VARS2-213ENST00000625423 CLIC2O15247 247 aa12.33□□□□□ -0.44
VARS2-213ENST00000625423 GRIN2DO15399 1336 aa12.33□□□□□ -0.44
VARS2-213ENST00000625423 CALUO43852 315 aaPredicted RBP12.33□□□□□ -0.44
VARS2-213ENST00000625423 CORO7P57737 925 aa12.33□□□□□ -0.44
VARS2-213ENST00000625423 IKQ13123 557 aaPredicted RBP12.33□□□□□ -0.44
VARS2-213ENST00000625423 CFAP58Q5T655 872 aa12.33□□□□□ -0.44
VARS2-213ENST00000625423 AMNQ9BXJ7 453 aa12.33□□□□□ -0.44
VARS2-213ENST00000625423 BHMT2Q9H2M3 363 aa12.33□□□□□ -0.44
VARS2-213ENST00000625423 EP400Q96L91 3159 aa12.33□□□□□ -0.44
VARS2-213ENST00000625423 ADAMTSL1Q8N6G6 1762 aa12.33□□□□□ -0.44
VARS2-213ENST00000625423 SPDYE3A6NKU9 549 aa12.33□□□□□ -0.44
VARS2-213ENST00000625423 PDXKO00764 312 aa12.33□□□□□ -0.44
VARS2-213ENST00000625423 KCNA1Q09470 495 aa12.33□□□□□ -0.44
VARS2-213ENST00000625423 Q4G0T1 1027 aa12.33□□□□□ -0.44
VARS2-213ENST00000625423 ALKBH5Q6P6C2 394 aaKnown RBP12.33□□□□□ -0.44
VARS2-213ENST00000625423 IQCKQ8N0W5 287 aa12.33□□□□□ -0.44
VARS2-213ENST00000625423 CYP2W1Q8TAV3 490 aa12.33□□□□□ -0.44
VARS2-213ENST00000625423 BCAS4Q8TDM0 211 aa12.33□□□□□ -0.44
VARS2-213ENST00000625423 RUSC1Q9BVN2 902 aa12.33□□□□□ -0.44
VARS2-213ENST00000625423 NAGPAQ9UK23 515 aa12.33□□□□□ -0.44
VARS2-213ENST00000625423 AJAP1Q9UKB5 411 aaPredicted RBP12.33□□□□□ -0.44
VARS2-213ENST00000625423 MYH4Q9Y623 1939 aa12.33□□□□□ -0.44
VARS2-213ENST00000625423 LTBP1Q14766 1721 aa12.33□□□□□ -0.44
VARS2-213ENST00000625423 ZNF233A6NK53 670 aa12.32□□□□□ -0.44
VARS2-213ENST00000625423 BTNL10A8MVZ5 291 aa12.32□□□□□ -0.44
VARS2-213ENST00000625423 F5H6K3 240 aa12.32□□□□□ -0.44
VARS2-213ENST00000625423 EIF3HO15372 352 aaKnown RBP eCLIP12.32□□□□□ -0.441e-7■□□□□ 11
VARS2-213ENST00000625423 KIF4AO95239 1232 aa12.32□□□□□ -0.44
VARS2-213ENST00000625423 GCNT3O95395 438 aa12.32□□□□□ -0.44
VARS2-213ENST00000625423 HOXA13P31271 388 aaPredicted RBP12.32□□□□□ -0.44
VARS2-213ENST00000625423 ICA1Q05084 483 aa12.32□□□□□ -0.44
VARS2-213ENST00000625423 KLRC3Q07444 240 aa12.32□□□□□ -0.44
VARS2-213ENST00000625423 EPHA7Q15375 998 aa12.32□□□□□ -0.44
VARS2-213ENST00000625423 FBXO11Q86XK2 927 aa12.32□□□□□ -0.44
VARS2-213ENST00000625423 KIAA0825Q8IV33 1275 aa12.32□□□□□ -0.44
VARS2-213ENST00000625423 BZW2Q9Y6E2 419 aaKnown RBP12.32□□□□□ -0.44
VARS2-213ENST00000625423 ASTN1O14525 1302 aa12.32□□□□□ -0.44
VARS2-213ENST00000625423 SFI1A8K8P3 1242 aa12.32□□□□□ -0.44
VARS2-213ENST00000625423 TBX3O15119 743 aa12.32□□□□□ -0.44
VARS2-213ENST00000625423 MSH4O15457 936 aa12.32□□□□□ -0.44
VARS2-213ENST00000625423 GDF11O95390 407 aa12.32□□□□□ -0.44
VARS2-213ENST00000625423 NR3C1P04150 777 aa12.32□□□□□ -0.44
VARS2-213ENST00000625423 MAGEA9P43362 315 aa12.32□□□□□ -0.44
VARS2-213ENST00000625423 RBM5P52756 815 aaKnown RBP eCLIP12.32□□□□□ -0.44
VARS2-213ENST00000625423 TNNC1P63316 161 aa12.32□□□□□ -0.44
VARS2-213ENST00000625423 C10orf76Q5T2E6 689 aa12.32□□□□□ -0.44
VARS2-213ENST00000625423 GJB7Q6PEY0 223 aa12.32□□□□□ -0.44
VARS2-213ENST00000625423 PIK3R5Q8WYR1 880 aa12.32□□□□□ -0.44
VARS2-213ENST00000625423 DBNDD1Q9H9R9 158 aa12.32□□□□□ -0.44
VARS2-213ENST00000625423 RGL1Q9NZL6 768 aa12.32□□□□□ -0.44
VARS2-213ENST00000625423 CEP104O60308 925 aa12.32□□□□□ -0.44
VARS2-213ENST00000625423 ATP1A2P50993 1020 aa12.32□□□□□ -0.44
VARS2-213ENST00000625423 MSL1Q68DK7 614 aa12.32□□□□□ -0.44
VARS2-213ENST00000625423 SLC30A10Q6XR72 485 aa12.32□□□□□ -0.44
VARS2-213ENST00000625423 SH3BP5LQ7L8J4 393 aa12.32□□□□□ -0.44
VARS2-213ENST00000625423 IKZF4Q9H2S9 585 aa12.32□□□□□ -0.44
VARS2-213ENST00000625423 SIX2Q9NPC8 291 aa12.32□□□□□ -0.44
VARS2-213ENST00000625423 TYW1Q9NV66 732 aaKnown RBP12.32□□□□□ -0.44
VARS2-213ENST00000625423 FAM198AQ9UFP1 575 aa12.32□□□□□ -0.44
VARS2-213ENST00000625423 TMEM59LQ9UK28 342 aa12.32□□□□□ -0.44
VARS2-213ENST00000625423 PCDHB13Q9Y5F0 798 aa12.32□□□□□ -0.44
VARS2-213ENST00000625423 SREBF1P36956 1147 aa12.31□□□□□ -0.44
VARS2-213ENST00000625423 PDCLQ13371 301 aa12.31□□□□□ -0.44
VARS2-213ENST00000625423 LRRC57Q8N9N7 239 aa12.31□□□□□ -0.44
VARS2-213ENST00000625423 PROCA1Q8NCQ7 364 aaPredicted RBP12.31□□□□□ -0.44
VARS2-213ENST00000625423 SLC35C1Q96A29 364 aa12.31□□□□□ -0.44
VARS2-213ENST00000625423 FAM20AQ96MK3 541 aa12.31□□□□□ -0.44
VARS2-213ENST00000625423 GCNT4Q9P109 453 aa12.31□□□□□ -0.44
VARS2-213ENST00000625423 PI4KBQ9UBF8 816 aa12.31□□□□□ -0.44
VARS2-213ENST00000625423 GREB1LQ9C091 1923 aaPredicted RBP12.31□□□□□ -0.44
VARS2-213ENST00000625423 EML1O00423 815 aa12.31□□□□□ -0.44
VARS2-213ENST00000625423 TBCAO75347 108 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms