RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 CTSHP09668 335 aa7.78□□□□□ -1.16
CDKL5-204ENST00000623364 ELAVL4P26378 380 aaKnown RBP7.78□□□□□ -1.16
CDKL5-204ENST00000623364 TARSP26639 723 aaKnown RBP7.78□□□□□ -1.16
CDKL5-204ENST00000623364 PPP4CP60510 307 aa7.78□□□□□ -1.16
CDKL5-204ENST00000623364 GPC5P78333 572 aa7.78□□□□□ -1.16
CDKL5-204ENST00000623364 ICA1Q05084 483 aa7.78□□□□□ -1.16
CDKL5-204ENST00000623364 SMC1AQ14683 1233 aaKnown RBP7.78□□□□□ -1.16
CDKL5-204ENST00000623364 TAF1BQ53T94 588 aaPredicted RBP7.78□□□□□ -1.16
CDKL5-204ENST00000623364 FAM83BQ5T0W9 1011 aa7.78□□□□□ -1.16
CDKL5-204ENST00000623364 TCEAL6Q6IPX3 200 aa7.78□□□□□ -1.16
CDKL5-204ENST00000623364 CCNI2Q6ZMN8 369 aaPredicted RBP7.78□□□□□ -1.16
CDKL5-204ENST00000623364 KRT25Q7Z3Z0 450 aa7.78□□□□□ -1.16
CDKL5-204ENST00000623364 RAB44Q7Z6P3 723 aaPredicted RBP7.78□□□□□ -1.16
CDKL5-204ENST00000623364 PRPF38AQ8NAV1 312 aaKnown RBP7.78□□□□□ -1.16
CDKL5-204ENST00000623364 MORC4Q8TE76 937 aa7.78□□□□□ -1.16
CDKL5-204ENST00000623364 TCEAL3Q969E4 200 aa7.78□□□□□ -1.16
CDKL5-204ENST00000623364 FCRL3Q96P31 734 aaPredicted RBP7.78□□□□□ -1.16
CDKL5-204ENST00000623364 OSBPL7Q9BZF2 842 aa7.78□□□□□ -1.16
CDKL5-204ENST00000623364 CCDC8Q9H0W5 538 aaPredicted RBP7.78□□□□□ -1.16
CDKL5-204ENST00000623364 SFXN1Q9H9B4 322 aa7.78□□□□□ -1.16
CDKL5-204ENST00000623364 GOPCQ9HD26 462 aa7.78□□□□□ -1.16
CDKL5-204ENST00000623364 TMEM9BQ9NQ34 198 aa7.78□□□□□ -1.16
CDKL5-204ENST00000623364 A1CFQ9NQ94 594 aaKnown RBP7.78□□□□□ -1.16
CDKL5-204ENST00000623364 BMP2KQ9NSY1 1161 aaPredicted RBP7.78□□□□□ -1.16
CDKL5-204ENST00000623364 ITPR2Q14571 2701 aa7.78□□□□□ -1.16
CDKL5-204ENST00000623364 ABCA2Q9BZC7 2435 aa7.78□□□□□ -1.16
CDKL5-204ENST00000623364 STAG3L1P0CL83 205 aa7.77□□□□□ -1.17
CDKL5-204ENST00000623364 HSPA5P11021 654 aaKnown RBP7.77□□□□□ -1.17
CDKL5-204ENST00000623364 RAP1GAPP47736 663 aa7.77□□□□□ -1.17
CDKL5-204ENST00000623364 CXCL12P48061 93 aa7.77□□□□□ -1.17
CDKL5-204ENST00000623364 PSEN2P49810 448 aa7.77□□□□□ -1.17
CDKL5-204ENST00000623364 LY6DQ14210 128 aa7.77□□□□□ -1.17
CDKL5-204ENST00000623364 BMS1Q14692 1282 aaKnown RBP7.77□□□□□ -1.17
CDKL5-204ENST00000623364 LCE2DQ5TA82 110 aaPredicted RBP7.77□□□□□ -1.17
CDKL5-204ENST00000623364 CACNA2D4Q7Z3S7 1137 aa7.77□□□□□ -1.17
CDKL5-204ENST00000623364 NPAS4Q8IUM7 802 aa7.77□□□□□ -1.17
CDKL5-204ENST00000623364 LRRC47Q8N1G4 583 aaKnown RBP7.77□□□□□ -1.17
CDKL5-204ENST00000623364 MRPL43Q8N983 215 aaKnown RBP7.77□□□□□ -1.17
CDKL5-204ENST00000623364 C8orf58Q8NAV2 365 aa7.77□□□□□ -1.17
CDKL5-204ENST00000623364 KLHDC4Q8TBB5 520 aa7.77□□□□□ -1.17
CDKL5-204ENST00000623364 GLG1Q92896 1179 aa7.77□□□□□ -1.17
CDKL5-204ENST00000623364 CHRDQ9H2X0 955 aa7.77□□□□□ -1.17
CDKL5-204ENST00000623364 MYH1P12882 1939 aa7.77□□□□□ -1.17
CDKL5-204ENST00000623364 ASCC3Q8N3C0 2202 aaKnown RBP7.76□□□□□ -1.17
CDKL5-204ENST00000623364 LAMA1P25391 3075 aa7.76□□□□□ -1.17
CDKL5-204ENST00000623364 C2orf71A6NGG8 1288 aa7.76□□□□□ -1.17
CDKL5-204ENST00000623364 TXNP10599 105 aaKnown RBP7.76□□□□□ -1.17
CDKL5-204ENST00000623364 C6P13671 934 aa7.76□□□□□ -1.17
CDKL5-204ENST00000623364 CA8P35219 290 aa7.76□□□□□ -1.17
CDKL5-204ENST00000623364 ZNF76P36508 570 aa7.76□□□□□ -1.17
CDKL5-204ENST00000623364 OAZ1P54368 228 aa7.76□□□□□ -1.17
CDKL5-204ENST00000623364 PFKPQ01813 784 aa7.76□□□□□ -1.17
CDKL5-204ENST00000623364 KRT17Q04695 432 aa7.76□□□□□ -1.17
CDKL5-204ENST00000623364 FLIIQ13045 1269 aa7.76□□□□□ -1.17
CDKL5-204ENST00000623364 MFSD10Q14728 455 aa7.76□□□□□ -1.17
CDKL5-204ENST00000623364 DGKDQ16760 1214 aa7.76□□□□□ -1.17
CDKL5-204ENST00000623364 KIAA0753Q2KHM9 967 aa7.76□□□□□ -1.17
CDKL5-204ENST00000623364 UAP1L1Q3KQV9 507 aa7.76□□□□□ -1.17
CDKL5-204ENST00000623364 HEATR6Q6AI08 1181 aaKnown RBP7.76□□□□□ -1.17
CDKL5-204ENST00000623364 ZNF852Q6ZMS4 543 aa7.76□□□□□ -1.17
CDKL5-204ENST00000623364 PRICKLE2Q7Z3G6 844 aa7.76□□□□□ -1.17
CDKL5-204ENST00000623364 SIAH1Q8IUQ4 282 aa7.76□□□□□ -1.17
CDKL5-204ENST00000623364 MIER1Q8N108 512 aa7.76□□□□□ -1.17
CDKL5-204ENST00000623364 COLGALT1Q8NBJ5 622 aa7.76□□□□□ -1.17
CDKL5-204ENST00000623364 SCFD2Q8WU76 684 aa7.76□□□□□ -1.17
CDKL5-204ENST00000623364 COPS5Q92905 334 aa7.76□□□□□ -1.17
CDKL5-204ENST00000623364 PCGF6Q9BYE7 350 aa7.76□□□□□ -1.17
CDKL5-204ENST00000623364 TCP11L1Q9NUJ3 509 aa7.76□□□□□ -1.17
CDKL5-204ENST00000623364 LRP2BPQ9P2M1 347 aa7.76□□□□□ -1.17
CDKL5-204ENST00000623364 SPTBN1Q01082 2364 aaKnown RBP7.76□□□□□ -1.17
CDKL5-204ENST00000623364 TLN1Q9Y490 2541 aaKnown RBP7.76□□□□□ -1.17
CDKL5-204ENST00000623364 LNP1A1A4G5 178 aa7.75□□□□□ -1.17
CDKL5-204ENST00000623364 ANHXE9PGG2 379 aa7.75□□□□□ -1.17
CDKL5-204ENST00000623364 ERVH48-1M5A8F1 160 aa7.75□□□□□ -1.17
CDKL5-204ENST00000623364 EYA2O00167 538 aa7.75□□□□□ -1.17
CDKL5-204ENST00000623364 CFBP00751 764 aa7.75□□□□□ -1.17
CDKL5-204ENST00000623364 USP5P45974 858 aa7.75□□□□□ -1.17
CDKL5-204ENST00000623364 PLCB3Q01970 1234 aa7.75□□□□□ -1.17
CDKL5-204ENST00000623364 HTR4Q13639 388 aa7.75□□□□□ -1.17
CDKL5-204ENST00000623364 UBAP2LQ14157 1087 aaKnown RBP7.75□□□□□ -1.17
CDKL5-204ENST00000623364 BEND3Q5T5X7 828 aa7.75□□□□□ -1.17
CDKL5-204ENST00000623364 NAA16Q6N069 864 aaPredicted RBP7.75□□□□□ -1.17
CDKL5-204ENST00000623364 C15orf39Q6ZRI6 1047 aa7.75□□□□□ -1.17
CDKL5-204ENST00000623364 TBC1D9Q6ZT07 1266 aa7.75□□□□□ -1.17
CDKL5-204ENST00000623364 TPRG1Q6ZUI0 275 aa7.75□□□□□ -1.17
CDKL5-204ENST00000623364 GPR155Q7Z3F1 870 aa7.75□□□□□ -1.17
CDKL5-204ENST00000623364 SUCLG2Q96I99 432 aa7.75□□□□□ -1.17
CDKL5-204ENST00000623364 CEP126Q9P2H0 1117 aa7.75□□□□□ -1.17
CDKL5-204ENST00000623364 ADD3Q9UEY8 706 aaKnown RBP7.75□□□□□ -1.17
CDKL5-204ENST00000623364 NUMBLQ9Y6R0 609 aa7.75□□□□□ -1.17
CDKL5-204ENST00000623364 NAV1Q8NEY1 1877 aa7.75□□□□□ -1.17
CDKL5-204ENST00000623364 SPG11Q96JI7 2443 aa7.74□□□□□ -1.17
CDKL5-204ENST00000623364 COL5A1P20908 1838 aaPredicted RBP7.74□□□□□ -1.17
CDKL5-204ENST00000623364 NF1P21359 2839 aa7.74□□□□□ -1.17
CDKL5-204ENST00000623364 C2CD2LO14523 706 aa7.74□□□□□ -1.17
CDKL5-204ENST00000623364 EPCAMP16422 314 aa7.74□□□□□ -1.17
CDKL5-204ENST00000623364 TIE1P35590 1138 aa7.74□□□□□ -1.17
CDKL5-204ENST00000623364 IL12RB1P42701 662 aa7.74□□□□□ -1.17
CDKL5-204ENST00000623364 FZD5Q13467 585 aa7.74□□□□□ -1.17
CDKL5-204ENST00000623364 PCSK4Q6UW60 755 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms