RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 NACC1Q96RE7 527 aa23.45■■□□□ 1.34
LIME1-210ENST00000621325 LACRTQ9GZZ8 138 aa23.45■■□□□ 1.34
LIME1-210ENST00000621325 NOL4O94818 638 aa23.44■■□□□ 1.34
LIME1-210ENST00000621325 BCRP11274 1271 aa23.44■■□□□ 1.34
LIME1-210ENST00000621325 CYLC1P35663 651 aaPredicted RBP23.44■■□□□ 1.34
LIME1-210ENST00000621325 USP14P54578 494 aa23.44■■□□□ 1.34
LIME1-210ENST00000621325 CDK17Q00537 523 aa23.44■■□□□ 1.34
LIME1-210ENST00000621325 BMT2Q1RMZ1 405 aa23.44■■□□□ 1.34
LIME1-210ENST00000621325 ZC2HC1CQ53FD0 456 aaPredicted RBP23.44■■□□□ 1.34
LIME1-210ENST00000621325 ZNF280CQ8ND82 737 aa23.44■■□□□ 1.34
LIME1-210ENST00000621325 NEK11Q8NG66 645 aa23.44■■□□□ 1.34
LIME1-210ENST00000621325 IQCDQ96DY2 449 aa23.44■■□□□ 1.34
LIME1-210ENST00000621325 CTDP1Q9Y5B0 961 aaPredicted RBP23.44■■□□□ 1.34
LIME1-210ENST00000621325 UBIAD1Q9Y5Z9 338 aa23.44■■□□□ 1.34
LIME1-210ENST00000621325 ZHX2Q9Y6X8 837 aa23.44■■□□□ 1.34
LIME1-210ENST00000621325 ZBED4O75132 1171 aa23.44■■□□□ 1.34
LIME1-210ENST00000621325 BRD2P25440 801 aaKnown RBP23.44■■□□□ 1.34
LIME1-210ENST00000621325 HMGCS2P54868 508 aa23.44■■□□□ 1.34
LIME1-210ENST00000621325 PCNX4Q63HM2 1172 aa23.44■■□□□ 1.34
LIME1-210ENST00000621325 NSMFQ6X4W1 530 aa23.44■■□□□ 1.34
LIME1-210ENST00000621325 KSR1Q8IVT5 923 aa23.44■■□□□ 1.34
LIME1-210ENST00000621325 CCDC170Q8IYT3 715 aa23.44■■□□□ 1.34
LIME1-210ENST00000621325 AGO4Q9HCK5 861 aaKnown RBP23.44■■□□□ 1.34
LIME1-210ENST00000621325 NLRC4Q9NPP4 1024 aa23.44■■□□□ 1.34
LIME1-210ENST00000621325 PICK1Q9NRD5 415 aa23.44■■□□□ 1.34
LIME1-210ENST00000621325 OLFML3Q9NRN5 406 aa23.44■■□□□ 1.34
LIME1-210ENST00000621325 GGA3Q9NZ52 723 aa23.44■■□□□ 1.34
LIME1-210ENST00000621325 FRMPD4Q14CM0 1322 aa23.43■■□□□ 1.34
LIME1-210ENST00000621325 EIF3CLB5ME19 914 aaKnown RBP23.43■■□□□ 1.34
LIME1-210ENST00000621325 PDXKO00764 312 aa23.43■■□□□ 1.34
LIME1-210ENST00000621325 UBXN4Q92575 508 aa23.43■■□□□ 1.34
LIME1-210ENST00000621325 EIF3CQ99613 913 aaKnown RBP23.43■■□□□ 1.34
LIME1-210ENST00000621325 EPC1Q9H2F5 836 aa23.43■■□□□ 1.34
LIME1-210ENST00000621325 DOCK1Q14185 1865 aa23.43■■□□□ 1.34
LIME1-210ENST00000621325 CTAGE9A4FU28 777 aa23.43■■□□□ 1.34
LIME1-210ENST00000621325 CLIC2O15247 247 aa23.43■■□□□ 1.34
LIME1-210ENST00000621325 AKAP3O75969 853 aa23.43■■□□□ 1.34
LIME1-210ENST00000621325 CAPN2P17655 700 aa23.43■■□□□ 1.34
LIME1-210ENST00000621325 GAP43P17677 238 aa23.43■■□□□ 1.34
LIME1-210ENST00000621325 HIRAP54198 1017 aaPredicted RBP23.43■■□□□ 1.34
LIME1-210ENST00000621325 KRT83P78385 493 aa23.43■■□□□ 1.34
LIME1-210ENST00000621325 CCDC122Q5T0U0 273 aa23.43■■□□□ 1.34
LIME1-210ENST00000621325 MIER3Q7Z3K6 550 aa23.43■■□□□ 1.34
LIME1-210ENST00000621325 KIAA1328Q86T90 577 aa23.43■■□□□ 1.34
LIME1-210ENST00000621325 CCDC42Q96M95 316 aa23.43■■□□□ 1.34
LIME1-210ENST00000621325 LSM14BQ9BX40 385 aaKnown RBP23.43■■□□□ 1.34
LIME1-210ENST00000621325 HAUS4Q9H6D7 363 aa23.43■■□□□ 1.34
LIME1-210ENST00000621325 GPRC5DQ9NZD1 345 aa23.43■■□□□ 1.34
LIME1-210ENST00000621325 MYCLP12524 364 aaPredicted RBP23.42■■□□□ 1.34
LIME1-210ENST00000621325 EPS15P42566 896 aa23.42■■□□□ 1.34
LIME1-210ENST00000621325 CASP4P49662 377 aa23.42■■□□□ 1.34
LIME1-210ENST00000621325 PGM5Q15124 567 aa23.42■■□□□ 1.34
LIME1-210ENST00000621325 FIZ1Q96SL8 496 aa23.42■■□□□ 1.34
LIME1-210ENST00000621325 PARVGQ9HBI0 331 aa23.42■■□□□ 1.34
LIME1-210ENST00000621325 JADE2Q9NQC1 790 aa23.42■■□□□ 1.34
LIME1-210ENST00000621325 TYW1Q9NV66 732 aaKnown RBP23.42■■□□□ 1.34
LIME1-210ENST00000621325 DUSP10Q9Y6W6 482 aa23.42■■□□□ 1.34
LIME1-210ENST00000621325 EFCAB8A8MWE9 144 aa23.42■■□□□ 1.34
LIME1-210ENST00000621325 TGFB1I1O43294 461 aa23.42■■□□□ 1.34
LIME1-210ENST00000621325 NR3C1P04150 777 aa23.42■■□□□ 1.34
LIME1-210ENST00000621325 KCNH2Q12809 1159 aa23.42■■□□□ 1.34
LIME1-210ENST00000621325 MTMR1Q13613 665 aa23.42■■□□□ 1.34
LIME1-210ENST00000621325 PDXDC1Q6P996 788 aa23.42■■□□□ 1.34
LIME1-210ENST00000621325 RNF207Q6ZRF8 634 aa23.42■■□□□ 1.34
LIME1-210ENST00000621325 CACNA2D4Q7Z3S7 1137 aa23.42■■□□□ 1.34
LIME1-210ENST00000621325 APOBEC3FQ8IUX4 373 aaKnown RBP23.42■■□□□ 1.34
LIME1-210ENST00000621325 JAKMIP2Q96AA8 810 aa23.42■■□□□ 1.34
LIME1-210ENST00000621325 ZMYM2Q9UBW7 1377 aa23.42■■□□□ 1.34
LIME1-210ENST00000621325 CALUO43852 315 aaPredicted RBP23.41■■□□□ 1.34
LIME1-210ENST00000621325 EIF4A3P38919 411 aaKnown RBP23.41■■□□□ 1.34
LIME1-210ENST00000621325 PRKG1Q13976 671 aa23.41■■□□□ 1.34
LIME1-210ENST00000621325 DLK2Q6UY11 383 aa23.41■■□□□ 1.34
LIME1-210ENST00000621325 NIPA1Q7RTP0 329 aa23.41■■□□□ 1.34
LIME1-210ENST00000621325 RMDN3Q96TC7 470 aa23.41■■□□□ 1.34
LIME1-210ENST00000621325 NAPGQ99747 312 aaPredicted RBP23.41■■□□□ 1.34
LIME1-210ENST00000621325 ZSWIM4Q9H7M6 989 aa23.41■■□□□ 1.34
LIME1-210ENST00000621325 MYO1AQ9UBC5 1043 aa23.41■■□□□ 1.34
LIME1-210ENST00000621325 MUTP22033 750 aa23.41■■□□□ 1.34
LIME1-210ENST00000621325 RNF146Q9NTX7 359 aa23.41■■□□□ 1.34
LIME1-210ENST00000621325 ARMCX3Q9UH62 379 aaPredicted RBP23.41■■□□□ 1.34
LIME1-210ENST00000621325 ATP9AO75110 1047 aa23.4■■□□□ 1.34
LIME1-210ENST00000621325 POLR2FP61218 127 aaKnown RBP23.4■■□□□ 1.34
LIME1-210ENST00000621325 PDCD2LQ9BRP1 358 aa23.4■■□□□ 1.34
LIME1-210ENST00000621325 AS3MTQ9HBK9 375 aa23.4■■□□□ 1.34
LIME1-210ENST00000621325 CDC23Q9UJX2 597 aa23.4■■□□□ 1.34
LIME1-210ENST00000621325 FAM184BQ9ULE4 1060 aa23.4■■□□□ 1.34
LIME1-210ENST00000621325 IPO7O95373 1038 aaKnown RBP23.4■■□□□ 1.34
LIME1-210ENST00000621325 ZNF131P52739 623 aa23.4■■□□□ 1.34
LIME1-210ENST00000621325 BAATQ14032 418 aaPredicted RBP23.4■■□□□ 1.34
LIME1-210ENST00000621325 COG2Q14746 738 aa23.4■■□□□ 1.34
LIME1-210ENST00000621325 MAEAQ7L5Y9 396 aa23.4■■□□□ 1.34
LIME1-210ENST00000621325 FRMD5Q7Z6J6 570 aa23.4■■□□□ 1.34
LIME1-210ENST00000621325 PXMP2Q9NR77 195 aa23.4■■□□□ 1.34
LIME1-210ENST00000621325 SAMM50Q9Y512 469 aa23.4■■□□□ 1.34
LIME1-210ENST00000621325 ARHGEF35A5YM69 484 aa23.39■■□□□ 1.34
LIME1-210ENST00000621325 KIF11P52732 1056 aa23.39■■□□□ 1.34
LIME1-210ENST00000621325 ARHGAP27Q6ZUM4 889 aa23.39■■□□□ 1.34
LIME1-210ENST00000621325 DAW1Q8N136 415 aa23.39■■□□□ 1.34
LIME1-210ENST00000621325 REPS2Q8NFH8 660 aa23.39■■□□□ 1.34
LIME1-210ENST00000621325 KLRG1Q96E93 195 aa23.39■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms