RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 RPUSD2Q8IZ73 545 aaKnown RBP9.32□□□□□ -0.92
NEK3-209ENST00000618856 LINC01465Q8N7H1 131 aa9.32□□□□□ -0.92
NEK3-209ENST00000618856 C4orf32Q8N8J7 132 aa9.32□□□□□ -0.92
NEK3-209ENST00000618856 FAM184AQ8NB25 1140 aa9.32□□□□□ -0.92
NEK3-209ENST00000618856 BBXQ8WY36 941 aaPredicted RBP9.32□□□□□ -0.92
NEK3-209ENST00000618856 TNPO1Q92973 898 aaKnown RBP9.32□□□□□ -0.92
NEK3-209ENST00000618856 INTS4Q96HW7 963 aaKnown RBP9.32□□□□□ -0.92
NEK3-209ENST00000618856 SCLYQ96I15 445 aa9.32□□□□□ -0.92
NEK3-209ENST00000618856 CEP89Q96ST8 783 aa9.32□□□□□ -0.92
NEK3-209ENST00000618856 NOD1Q9Y239 953 aa9.32□□□□□ -0.92
NEK3-209ENST00000618856 PCDHA2Q9Y5H9 948 aa9.32□□□□□ -0.92
NEK3-209ENST00000618856 WDR81Q562E7 1941 aa9.32□□□□□ -0.92
NEK3-209ENST00000618856 TRIP12Q14669 1992 aaPredicted RBP9.32□□□□□ -0.92
NEK3-209ENST00000618856 POTEB3A0JP26 581 aa9.31□□□□□ -0.92
NEK3-209ENST00000618856 EML1O00423 815 aa9.31□□□□□ -0.92
NEK3-209ENST00000618856 RPLP2P05387 115 aaKnown RBP9.31□□□□□ -0.92
NEK3-209ENST00000618856 ACRP10323 421 aa9.31□□□□□ -0.92
NEK3-209ENST00000618856 MARK3P27448 753 aa9.31□□□□□ -0.92
NEK3-209ENST00000618856 GJB2P29033 226 aa9.31□□□□□ -0.92
NEK3-209ENST00000618856 TOB1P50616 345 aaPredicted RBP9.31□□□□□ -0.92
NEK3-209ENST00000618856 CHMP4BP1P59074 171 aa9.31□□□□□ -0.92
NEK3-209ENST00000618856 TARBP2Q15633 366 aaKnown RBP9.31□□□□□ -0.92
NEK3-209ENST00000618856 UGCGQ16739 394 aa9.31□□□□□ -0.92
NEK3-209ENST00000618856 ZNF484Q5JVG2 852 aa9.31□□□□□ -0.92
NEK3-209ENST00000618856 ZNF618Q5T7W0 954 aa9.31□□□□□ -0.92
NEK3-209ENST00000618856 PDXDC2PQ6P474 469 aa9.31□□□□□ -0.92
NEK3-209ENST00000618856 POTEBQ6S5H4 581 aa9.31□□□□□ -0.92
NEK3-209ENST00000618856 RUFY4Q6ZNE9 571 aa9.31□□□□□ -0.92
NEK3-209ENST00000618856 SLFN12Q8IYM2 578 aa9.31□□□□□ -0.92
NEK3-209ENST00000618856 RETREG2Q8NC44 543 aa9.31□□□□□ -0.92
NEK3-209ENST00000618856 UIMC1Q96RL1 719 aa9.31□□□□□ -0.92
NEK3-209ENST00000618856 NIFKQ9BYG3 293 aaKnown RBP9.31□□□□□ -0.92
NEK3-209ENST00000618856 GABBR1Q9UBS5 961 aa9.31□□□□□ -0.92
NEK3-209ENST00000618856 TUBE1Q9UJT0 475 aa9.31□□□□□ -0.92
NEK3-209ENST00000618856 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.31□□□□□ -0.92
NEK3-209ENST00000618856 SCN5AQ14524 2016 aa9.31□□□□□ -0.92
NEK3-209ENST00000618856 KDM3AQ9Y4C1 1321 aa9.31□□□□□ -0.92
NEK3-209ENST00000618856 SMIM35A0A1B0GVV1 85 aa9.3□□□□□ -0.92
NEK3-209ENST00000618856 BACH1O14867 736 aa9.3□□□□□ -0.92
NEK3-209ENST00000618856 NEMFO60524 1076 aa9.3□□□□□ -0.92
NEK3-209ENST00000618856 C22orf31O95567 290 aa9.3□□□□□ -0.92
NEK3-209ENST00000618856 FGBP02675 491 aa9.3□□□□□ -0.92
NEK3-209ENST00000618856 CHRNA1P02708 482 aa9.3□□□□□ -0.92
NEK3-209ENST00000618856 OATP04181 439 aa9.3□□□□□ -0.92
NEK3-209ENST00000618856 THPOP40225 353 aa9.3□□□□□ -0.92
NEK3-209ENST00000618856 SMAD3P84022 425 aaKnown RBP9.3□□□□□ -0.92
NEK3-209ENST00000618856 EPHA7Q15375 998 aa9.3□□□□□ -0.92
NEK3-209ENST00000618856 TCTN1Q2MV58 587 aa9.3□□□□□ -0.92
NEK3-209ENST00000618856 PLEKHG4Q58EX7 1191 aa9.3□□□□□ -0.92
NEK3-209ENST00000618856 MTHFD1LQ6UB35 978 aa9.3□□□□□ -0.92
NEK3-209ENST00000618856 NME8Q8N427 588 aa9.3□□□□□ -0.92
NEK3-209ENST00000618856 FAM167AQ96KS9 214 aa9.3□□□□□ -0.92
NEK3-209ENST00000618856 HSD17B14Q9BPX1 270 aa9.3□□□□□ -0.92
NEK3-209ENST00000618856 TMEM60Q9H2L4 133 aa9.3□□□□□ -0.92
NEK3-209ENST00000618856 CXXC1Q9P0U4 656 aaPredicted RBP9.3□□□□□ -0.92
NEK3-209ENST00000618856 KIF3AQ9Y496 699 aa9.3□□□□□ -0.92
NEK3-209ENST00000618856 SIP14410 1827 aa9.3□□□□□ -0.92
NEK3-209ENST00000618856 CHD7Q9P2D1 2997 aa9.3□□□□□ -0.92
NEK3-209ENST00000618856 IGKV6-21A0A0C4DH24 114 aa9.29□□□□□ -0.92
NEK3-209ENST00000618856 RSPH10B2B2RC85 870 aa9.29□□□□□ -0.92
NEK3-209ENST00000618856 K7ELQ4 463 aaPredicted RBP9.29□□□□□ -0.92
NEK3-209ENST00000618856 BAIAP3O94812 1187 aa9.29□□□□□ -0.92
NEK3-209ENST00000618856 SLITRK3O94933 977 aa9.29□□□□□ -0.92
NEK3-209ENST00000618856 LYPLA2O95372 231 aa9.29□□□□□ -0.92
NEK3-209ENST00000618856 RSPH10BP0C881 870 aa9.29□□□□□ -0.92
NEK3-209ENST00000618856 KLRC1P26715 233 aa9.29□□□□□ -0.92
NEK3-209ENST00000618856 FOSBP53539 338 aa9.29□□□□□ -0.92
NEK3-209ENST00000618856 CALCRLQ16602 461 aa9.29□□□□□ -0.92
NEK3-209ENST00000618856 XKR3Q5GH77 459 aa9.29□□□□□ -0.92
NEK3-209ENST00000618856 FAM109BQ6ICB4 259 aaPredicted RBP9.29□□□□□ -0.92
NEK3-209ENST00000618856 CNKSR3Q6P9H4 555 aa9.29□□□□□ -0.92
NEK3-209ENST00000618856 FAM43BQ6ZT52 329 aaPredicted RBP9.29□□□□□ -0.92
NEK3-209ENST00000618856 ANO5Q75V66 913 aa9.29□□□□□ -0.92
NEK3-209ENST00000618856 MIER3Q7Z3K6 550 aa9.29□□□□□ -0.92
NEK3-209ENST00000618856 KIAA0319LQ8IZA0 1049 aa9.29□□□□□ -0.92
NEK3-209ENST00000618856 PIP4P2Q8N4L2 257 aa9.29□□□□□ -0.92
NEK3-209ENST00000618856 TRAPPC12Q8WVT3 735 aa9.29□□□□□ -0.92
NEK3-209ENST00000618856 ZBTB10Q96DT7 871 aa9.29□□□□□ -0.92
NEK3-209ENST00000618856 RNPC3Q96LT9 517 aaKnown RBP9.29□□□□□ -0.92
NEK3-209ENST00000618856 OSBPL7Q9BZF2 842 aa9.29□□□□□ -0.92
NEK3-209ENST00000618856 NRBP2Q9NSY0 501 aa9.29□□□□□ -0.92
NEK3-209ENST00000618856 WRAP73Q9P2S5 460 aaPredicted RBP9.29□□□□□ -0.92
NEK3-209ENST00000618856 TCEAL9Q9UHQ7 104 aa9.29□□□□□ -0.92
NEK3-209ENST00000618856 CEP131Q9UPN4 1083 aa9.29□□□□□ -0.92
NEK3-209ENST00000618856 SMC3Q9UQE7 1217 aa9.29□□□□□ -0.92
NEK3-209ENST00000618856 TRPC6Q9Y210 931 aa9.29□□□□□ -0.92
NEK3-209ENST00000618856 SQORQ9Y6N5 450 aa9.29□□□□□ -0.92
NEK3-209ENST00000618856 TRANK1O15050 2925 aa9.29□□□□□ -0.92
NEK3-209ENST00000618856 TET1Q8NFU7 2136 aa9.29□□□□□ -0.92
NEK3-209ENST00000618856 MAGEB2O15479 319 aa9.28□□□□□ -0.92
NEK3-209ENST00000618856 CHMP2AO43633 222 aa9.28□□□□□ -0.92
NEK3-209ENST00000618856 BAG4O95429 457 aaKnown RBP9.28□□□□□ -0.92
NEK3-209ENST00000618856 P4HBP07237 508 aaKnown RBP9.28□□□□□ -0.92
NEK3-209ENST00000618856 QARSP47897 775 aaKnown RBP9.28□□□□□ -0.92
NEK3-209ENST00000618856 PSMC5P62195 406 aa9.28□□□□□ -0.92
NEK3-209ENST00000618856 PRKCEQ02156 737 aa9.28□□□□□ -0.92
NEK3-209ENST00000618856 TTC38Q5R3I4 469 aa9.28□□□□□ -0.92
NEK3-209ENST00000618856 C4orf19Q8IY42 314 aa9.28□□□□□ -0.92
NEK3-209ENST00000618856 PHOSPHO2Q8TCD6 241 aa9.28□□□□□ -0.92
NEK3-209ENST00000618856 DNAJB3Q8WWF6 145 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms