RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 C6orf50Q9HD87 102 aa14.33□□□□□ -0.12
MSH6-214ENST00000616033 CEP72Q9P209 647 aa14.33□□□□□ -0.12
MSH6-214ENST00000616033 LAMB4A4D0S4 1761 aa14.33□□□□□ -0.12
MSH6-214ENST00000616033 ECHS1P30084 290 aa14.32□□□□□ -0.12
MSH6-214ENST00000616033 ASTE1Q2TB18 679 aaPredicted RBP14.32□□□□□ -0.12
MSH6-214ENST00000616033 UNC13DQ70J99 1090 aa14.32□□□□□ -0.12
MSH6-214ENST00000616033 PTF1AQ7RTS3 328 aa14.32□□□□□ -0.12
MSH6-214ENST00000616033 CCDC26Q8TAB7 109 aa14.32□□□□□ -0.12
MSH6-214ENST00000616033 AGAP11Q8TF27 550 aa14.32□□□□□ -0.12
MSH6-214ENST00000616033 GPR101Q96P66 508 aaPredicted RBP14.32□□□□□ -0.12
MSH6-214ENST00000616033 TMEM165Q9HC07 324 aa14.32□□□□□ -0.12
MSH6-214ENST00000616033 MAD2L2Q9UI95 211 aa14.32□□□□□ -0.12
MSH6-214ENST00000616033 PCDHB13Q9Y5F0 798 aa14.32□□□□□ -0.12
MSH6-214ENST00000616033 UBAP1LF5GYI3 381 aa14.32□□□□□ -0.12
MSH6-214ENST00000616033 PJA2O43164 708 aa14.32□□□□□ -0.12
MSH6-214ENST00000616033 DRD4P21917 467 aa14.32□□□□□ -0.12
MSH6-214ENST00000616033 INHBEP58166 350 aa14.32□□□□□ -0.12
MSH6-214ENST00000616033 REXO1Q8N1G1 1221 aaKnown RBP14.32□□□□□ -0.12
MSH6-214ENST00000616033 EPS8L3Q8TE67 593 aaKnown RBP14.32□□□□□ -0.12
MSH6-214ENST00000616033 ADAM33Q9BZ11 813 aa14.32□□□□□ -0.12
MSH6-214ENST00000616033 IKZF4Q9H2S9 585 aa14.32□□□□□ -0.12
MSH6-214ENST00000616033 KIAA1024Q9UPX6 916 aa14.32□□□□□ -0.12
MSH6-214ENST00000616033 UBOX5O94941 541 aa14.32□□□□□ -0.12
MSH6-214ENST00000616033 CYP19A1P11511 503 aaPredicted RBP14.32□□□□□ -0.12
MSH6-214ENST00000616033 HNRNPH3P31942 346 aaKnown RBP14.32□□□□□ -0.12
MSH6-214ENST00000616033 COASYQ13057 564 aa14.32□□□□□ -0.12
MSH6-214ENST00000616033 SLC29A2Q14542 456 aa14.32□□□□□ -0.12
MSH6-214ENST00000616033 LRRC55Q6ZSA7 311 aa14.32□□□□□ -0.12
MSH6-214ENST00000616033 C3orf67Q6ZVT6 689 aa14.32□□□□□ -0.12
MSH6-214ENST00000616033 TMC3Q7Z5M5 1100 aa14.32□□□□□ -0.12
MSH6-214ENST00000616033 CCT6BQ92526 530 aa14.32□□□□□ -0.12
MSH6-214ENST00000616033 TMEM47Q9BQJ4 181 aa14.32□□□□□ -0.12
MSH6-214ENST00000616033 BMP2KQ9NSY1 1161 aaPredicted RBP14.32□□□□□ -0.12
MSH6-214ENST00000616033 RNF14Q9UBS8 474 aa14.32□□□□□ -0.12
MSH6-214ENST00000616033 TBK1Q9UHD2 729 aa14.32□□□□□ -0.12
MSH6-214ENST00000616033 ANAPC4Q9UJX5 808 aa14.32□□□□□ -0.12
MSH6-214ENST00000616033 RTCBQ9Y3I0 505 aaKnown RBP14.32□□□□□ -0.12
MSH6-214ENST00000616033 KIF1AQ12756 1690 aa14.32□□□□□ -0.12
MSH6-214ENST00000616033 SSU72P8A0A1W2PR75 194 aa14.31□□□□□ -0.12
MSH6-214ENST00000616033 H0YGN5 161 aa14.31□□□□□ -0.12
MSH6-214ENST00000616033 PYGLP06737 847 aa14.31□□□□□ -0.12
MSH6-214ENST00000616033 NR2F2P24468 414 aa14.31□□□□□ -0.12
MSH6-214ENST00000616033 ECM1Q16610 540 aa14.31□□□□□ -0.12
MSH6-214ENST00000616033 DENND2CQ68D51 928 aa14.31□□□□□ -0.12
MSH6-214ENST00000616033 ZNF572Q7Z3I7 529 aaPredicted RBP14.31□□□□□ -0.12
MSH6-214ENST00000616033 MRRFQ96E11 262 aaKnown RBP14.31□□□□□ -0.12
MSH6-214ENST00000616033 PNMA5Q96PV4 448 aa14.31□□□□□ -0.12
MSH6-214ENST00000616033 BARHL2Q9NY43 387 aa14.31□□□□□ -0.12
MSH6-214ENST00000616033 AGAP1Q9UPQ3 857 aa14.31□□□□□ -0.12
MSH6-214ENST00000616033 NFS1Q9Y697 457 aa14.31□□□□□ -0.12
MSH6-214ENST00000616033 ALS2Q96Q42 1657 aa14.31□□□□□ -0.12
MSH6-214ENST00000616033 PKD1L3Q7Z443 1732 aa14.31□□□□□ -0.12
MSH6-214ENST00000616033 F8VZ95 297 aa14.31□□□□□ -0.12
MSH6-214ENST00000616033 VPS41P49754 854 aa14.31□□□□□ -0.12
MSH6-214ENST00000616033 BIRC3Q13489 604 aa14.31□□□□□ -0.12
MSH6-214ENST00000616033 CCDC50Q8IVM0 306 aa14.31□□□□□ -0.12
MSH6-214ENST00000616033 CD302Q8IX05 232 aa14.31□□□□□ -0.12
MSH6-214ENST00000616033 KLHL29Q96CT2 875 aa14.31□□□□□ -0.12
MSH6-214ENST00000616033 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.31□□□□□ -0.12
MSH6-214ENST00000616033 SFI1A8K8P3 1242 aa14.31□□□□□ -0.12
MSH6-214ENST00000616033 H0Y3Z8 333 aa14.31□□□□□ -0.12
MSH6-214ENST00000616033 ORC4O43929 436 aa14.31□□□□□ -0.12
MSH6-214ENST00000616033 TNFRSF8P28908 595 aa14.31□□□□□ -0.12
MSH6-214ENST00000616033 CUL1Q13616 776 aa14.31□□□□□ -0.12
MSH6-214ENST00000616033 ARHGAP44Q17R89 818 aa14.31□□□□□ -0.12
MSH6-214ENST00000616033 WLSQ5T9L3 541 aa14.31□□□□□ -0.12
MSH6-214ENST00000616033 GUF1Q8N442 669 aaKnown RBP14.31□□□□□ -0.12
MSH6-214ENST00000616033 RDH13Q8NBN7 331 aa14.31□□□□□ -0.12
MSH6-214ENST00000616033 ZNF483Q8TF39 744 aaPredicted RBP14.31□□□□□ -0.12
MSH6-214ENST00000616033 FAM84BQ96KN1 310 aaPredicted RBP14.31□□□□□ -0.12
MSH6-214ENST00000616033 BRIP1Q9BX63 1249 aa14.31□□□□□ -0.12
MSH6-214ENST00000616033 BCAS3Q9H6U6 928 aa14.31□□□□□ -0.12
MSH6-214ENST00000616033 FGFR1OP2Q9NVK5 253 aa14.31□□□□□ -0.12
MSH6-214ENST00000616033 MYH7BA7E2Y1 1941 aa14.31□□□□□ -0.12
MSH6-214ENST00000616033 TJP1Q07157 1748 aa14.31□□□□□ -0.12
MSH6-214ENST00000616033 NID2Q14112 1375 aa14.3□□□□□ -0.12
MSH6-214ENST00000616033 BCL9LQ86UU0 1499 aa14.3□□□□□ -0.12
MSH6-214ENST00000616033 IGF2BP3O00425 579 aaKnown RBP eCLIP14.3□□□□□ -0.12
MSH6-214ENST00000616033 TNIP1Q15025 636 aa14.3□□□□□ -0.12
MSH6-214ENST00000616033 NKX1-1Q15270 411 aaPredicted RBP14.3□□□□□ -0.12
MSH6-214ENST00000616033 NBPF20Q3BBV1 942 aa14.3□□□□□ -0.12
MSH6-214ENST00000616033 SEPT14Q6ZU15 432 aa14.3□□□□□ -0.12
MSH6-214ENST00000616033 MREGQ8N565 214 aa14.3□□□□□ -0.12
MSH6-214ENST00000616033 FBXO25Q8TCJ0 367 aa14.3□□□□□ -0.12
MSH6-214ENST00000616033 CELF1Q92879 486 aaKnown RBP14.3□□□□□ -0.12
MSH6-214ENST00000616033 NSUN4Q96CB9 384 aaKnown RBP14.3□□□□□ -0.12
MSH6-214ENST00000616033 ZMYND12Q9H0C1 365 aa14.3□□□□□ -0.12
MSH6-214ENST00000616033 A1CFQ9NQ94 594 aaKnown RBP14.3□□□□□ -0.12
MSH6-214ENST00000616033 PNMA3Q9UL41 463 aa14.3□□□□□ -0.12
MSH6-214ENST00000616033 ACSL3O95573 720 aa14.3□□□□□ -0.12
MSH6-214ENST00000616033 PDHA1P08559 390 aa14.3□□□□□ -0.12
MSH6-214ENST00000616033 NUGGCQ68CJ6 796 aa14.3□□□□□ -0.12
MSH6-214ENST00000616033 GLYCTKQ8IVS8 523 aa14.3□□□□□ -0.12
MSH6-214ENST00000616033 LRRC47Q8N1G4 583 aaKnown RBP14.3□□□□□ -0.12
MSH6-214ENST00000616033 CNKSR2Q8WXI2 1034 aa14.3□□□□□ -0.12
MSH6-214ENST00000616033 SEMA4AQ9H3S1 761 aa14.3□□□□□ -0.12
MSH6-214ENST00000616033 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.3□□□□□ -0.123e-10■■■■■ 28.1
MSH6-214ENST00000616033 SWAP70Q9UH65 585 aa14.3□□□□□ -0.12
MSH6-214ENST00000616033 MYL1P05976 194 aa14.29□□□□□ -0.12
MSH6-214ENST00000616033 CREB1P16220 341 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms