RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 DHX15O43143 795 aaKnown RBP18.21■□□□□ 0.51
SGMS1-209ENST00000609445 PRPF3O43395 683 aaKnown RBP18.21■□□□□ 0.51
SGMS1-209ENST00000609445 POTEBQ6S5H4 581 aa18.21■□□□□ 0.51
SGMS1-209ENST00000609445 ABHD15Q6UXT9 468 aa18.21■□□□□ 0.51
SGMS1-209ENST00000609445 CCDC60Q8IWA6 550 aaPredicted RBP18.21■□□□□ 0.51
SGMS1-209ENST00000609445 LINC01599Q8WXQ3 324 aa18.21■□□□□ 0.51
SGMS1-209ENST00000609445 UBE2ZQ9H832 354 aaPredicted RBP18.21■□□□□ 0.51
SGMS1-209ENST00000609445 C6orf50Q9HD87 102 aa18.21■□□□□ 0.51
SGMS1-209ENST00000609445 PCDHA2Q9Y5H9 948 aa18.21■□□□□ 0.51
SGMS1-209ENST00000609445 TRPV2Q9Y5S1 764 aa18.21■□□□□ 0.51
SGMS1-209ENST00000609445 H3BNC9 293 aa18.2■□□□□ 0.5
SGMS1-209ENST00000609445 CYP3A4P08684 503 aa18.2■□□□□ 0.5
SGMS1-209ENST00000609445 NTRK3Q16288 839 aa18.2■□□□□ 0.5
SGMS1-209ENST00000609445 IER5Q5VY09 327 aa18.2■□□□□ 0.5
SGMS1-209ENST00000609445 MTHFD1LQ6UB35 978 aa18.2■□□□□ 0.5
SGMS1-209ENST00000609445 RTN4RL1Q86UN2 441 aaPredicted RBP18.2■□□□□ 0.5
SGMS1-209ENST00000609445 REXO1Q8N1G1 1221 aaKnown RBP18.2■□□□□ 0.5
SGMS1-209ENST00000609445 FIBCD1Q8N539 461 aa18.2■□□□□ 0.5
SGMS1-209ENST00000609445 MRPL38Q96DV4 380 aaKnown RBP18.2■□□□□ 0.5
SGMS1-209ENST00000609445 AGXT2Q9BYV1 514 aa18.2■□□□□ 0.5
SGMS1-209ENST00000609445 NCOA5Q9HCD5 579 aaKnown RBP18.2■□□□□ 0.5
SGMS1-209ENST00000609445 KIAA1671Q9BY89 1806 aa18.19■□□□□ 0.5
SGMS1-209ENST00000609445 IPO5O00410 1097 aaKnown RBP18.19■□□□□ 0.5
SGMS1-209ENST00000609445 REC8O95072 547 aa18.19■□□□□ 0.5
SGMS1-209ENST00000609445 LINC00271P0C7V0 271 aa18.19■□□□□ 0.5
SGMS1-209ENST00000609445 CTNNB1P35222 781 aa18.19■□□□□ 0.5
SGMS1-209ENST00000609445 CCT2P78371 535 aaKnown RBP18.19■□□□□ 0.5
SGMS1-209ENST00000609445 FAM160B1Q5W0V3 765 aa18.19■□□□□ 0.5
SGMS1-209ENST00000609445 PDXDC2PQ6P474 469 aa18.19■□□□□ 0.5
SGMS1-209ENST00000609445 FBXL16Q8N461 479 aa18.19■□□□□ 0.5
SGMS1-209ENST00000609445 TNPO1Q92973 898 aaKnown RBP18.19■□□□□ 0.5
SGMS1-209ENST00000609445 ZNF577Q9BSK1 485 aa18.19■□□□□ 0.5
SGMS1-209ENST00000609445 SLC26A6Q9BXS9 759 aa18.19■□□□□ 0.5
SGMS1-209ENST00000609445 CELF4Q9BZC1 486 aaKnown RBP18.19■□□□□ 0.5
SGMS1-209ENST00000609445 RC3H2Q9HBD1 1191 aaKnown RBP18.19■□□□□ 0.5
SGMS1-209ENST00000609445 ZNF302Q9NR11 478 aa18.19■□□□□ 0.5
SGMS1-209ENST00000609445 ADGRA3Q8IWK6 1321 aa18.19■□□□□ 0.5
SGMS1-209ENST00000609445 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.18■□□□□ 0.5
SGMS1-209ENST00000609445 SMIM35A0A1B0GVV1 85 aa18.18■□□□□ 0.5
SGMS1-209ENST00000609445 M0QZ92 97 aa18.18■□□□□ 0.5
SGMS1-209ENST00000609445 HBP1O60381 514 aa18.18■□□□□ 0.5
SGMS1-209ENST00000609445 ATP4AP20648 1035 aa18.18■□□□□ 0.5
SGMS1-209ENST00000609445 KLRC1P26715 233 aa18.18■□□□□ 0.5
SGMS1-209ENST00000609445 PSMA5P28066 241 aa18.18■□□□□ 0.5
SGMS1-209ENST00000609445 PDIA3P30101 505 aaKnown RBP18.18■□□□□ 0.5
SGMS1-209ENST00000609445 SLC26A2P50443 739 aa18.18■□□□□ 0.5
SGMS1-209ENST00000609445 AKAP17AQ02040 695 aaKnown RBP18.18■□□□□ 0.5
SGMS1-209ENST00000609445 PTPROQ16827 1216 aa18.18■□□□□ 0.5
SGMS1-209ENST00000609445 SWSAP1Q6NVH7 229 aa18.18■□□□□ 0.5
SGMS1-209ENST00000609445 ATP8B4Q8TF62 1192 aa18.18■□□□□ 0.5
SGMS1-209ENST00000609445 CCDC12Q8WUD4 166 aaPredicted RBP18.18■□□□□ 0.5
SGMS1-209ENST00000609445 VPS54Q9P1Q0 977 aa18.18■□□□□ 0.5
SGMS1-209ENST00000609445 PADI3Q9ULW8 664 aa18.18■□□□□ 0.5
SGMS1-209ENST00000609445 IGSF9BQ9UPX0 1349 aa18.18■□□□□ 0.5
SGMS1-209ENST00000609445 ZBTB42B2RXF5 422 aa18.17■□□□□ 0.5
SGMS1-209ENST00000609445 RPLP2P05387 115 aaKnown RBP18.17■□□□□ 0.5
SGMS1-209ENST00000609445 IFNAR1P17181 557 aa18.17■□□□□ 0.5
SGMS1-209ENST00000609445 KCNA5P22460 613 aa18.17■□□□□ 0.5
SGMS1-209ENST00000609445 GNA11P29992 359 aa18.17■□□□□ 0.5
SGMS1-209ENST00000609445 KRT76Q01546 638 aa18.17■□□□□ 0.5
SGMS1-209ENST00000609445 TOB2Q14106 344 aaPredicted RBP18.17■□□□□ 0.5
SGMS1-209ENST00000609445 TMEM266Q2M3C6 531 aa18.17■□□□□ 0.5
SGMS1-209ENST00000609445 PRR16Q569H4 304 aa18.17■□□□□ 0.5
SGMS1-209ENST00000609445 TCEAL5Q5H9L2 206 aa18.17■□□□□ 0.5
SGMS1-209ENST00000609445 MIS18BP1Q6P0N0 1132 aa18.17■□□□□ 0.5
SGMS1-209ENST00000609445 TRMT1LQ7Z2T5 733 aaKnown RBP18.17■□□□□ 0.5
SGMS1-209ENST00000609445 ZNF689Q96CS4 500 aaPredicted RBP18.17■□□□□ 0.5
SGMS1-209ENST00000609445 LARP6Q9BRS8 491 aaKnown RBP18.17■□□□□ 0.5
SGMS1-209ENST00000609445 RNF26Q9BY78 433 aaPredicted RBP18.17■□□□□ 0.5
SGMS1-209ENST00000609445 CDHR5Q9HBB8 845 aa18.17■□□□□ 0.5
SGMS1-209ENST00000609445 SQORQ9Y6N5 450 aa18.17■□□□□ 0.5
SGMS1-209ENST00000609445 GRM6O15303 877 aa18.16■□□□□ 0.5
SGMS1-209ENST00000609445 EDIL3O43854 480 aa18.16■□□□□ 0.5
SGMS1-209ENST00000609445 IBSPP21815 317 aaPredicted RBP18.16■□□□□ 0.5
SGMS1-209ENST00000609445 BMPR1AP36894 532 aa18.16■□□□□ 0.5
SGMS1-209ENST00000609445 SETQ01105 290 aaPredicted RBP18.16■□□□□ 0.5
SGMS1-209ENST00000609445 PAK2Q13177 524 aa18.16■□□□□ 0.5
SGMS1-209ENST00000609445 BTG3Q14201 252 aaPredicted RBP18.16■□□□□ 0.5
SGMS1-209ENST00000609445 TIGD5Q53EQ6 642 aa18.16■□□□□ 0.5
SGMS1-209ENST00000609445 MCTP2Q6DN12 878 aa18.16■□□□□ 0.5
SGMS1-209ENST00000609445 BANK1Q8NDB2 785 aa18.16■□□□□ 0.5
SGMS1-209ENST00000609445 LENG9Q96B70 501 aa18.16■□□□□ 0.5
SGMS1-209ENST00000609445 PPP1R16BQ96T49 567 aa18.16■□□□□ 0.5
SGMS1-209ENST00000609445 TBC1D22BQ9NU19 505 aa18.16■□□□□ 0.5
SGMS1-209ENST00000609445 GINS2Q9Y248 185 aa18.16■□□□□ 0.5
SGMS1-209ENST00000609445 KDM3AQ9Y4C1 1321 aa18.16■□□□□ 0.5
SGMS1-209ENST00000609445 COL1A2P08123 1366 aa18.16■□□□□ 0.5
SGMS1-209ENST00000609445 C5orf67F2Z3F1 127 aa18.15■□□□□ 0.5
SGMS1-209ENST00000609445 DGKIO75912 1065 aa18.15■□□□□ 0.5
SGMS1-209ENST00000609445 CSPG5O95196 566 aa18.15■□□□□ 0.5
SGMS1-209ENST00000609445 CIITAP33076 1130 aa18.15■□□□□ 0.5
SGMS1-209ENST00000609445 EVCP57679 992 aa18.15■□□□□ 0.5
SGMS1-209ENST00000609445 ZNF484Q5JVG2 852 aa18.15■□□□□ 0.5
SGMS1-209ENST00000609445 ZNF746Q6NUN9 644 aaPredicted RBP18.15■□□□□ 0.5
SGMS1-209ENST00000609445 RUFY3Q7L099 469 aa18.15■□□□□ 0.5
SGMS1-209ENST00000609445 CKAP2LQ8IYA6 745 aa18.15■□□□□ 0.5
SGMS1-209ENST00000609445 KIAA0319LQ8IZA0 1049 aa18.15■□□□□ 0.5
SGMS1-209ENST00000609445 CRIPAKQ8N1N5 446 aa18.15■□□□□ 0.5
SGMS1-209ENST00000609445 NME8Q8N427 588 aa18.15■□□□□ 0.5
SGMS1-209ENST00000609445 CCDC148Q8NFR7 591 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms