RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 DNAJB3Q8WWF6 145 aa15.17■□□□□ 0.02
CTSA-213ENST00000606782 SAMD11Q96NU1 681 aa15.17■□□□□ 0.02
CTSA-213ENST00000606782 LIMCH1Q9UPQ0 1083 aa15.17■□□□□ 0.02
CTSA-213ENST00000606782 TTC3P53804 2025 aa15.17■□□□□ 0.02
CTSA-213ENST00000606782 SIP14410 1827 aa15.17■□□□□ 0.02
CTSA-213ENST00000606782 PFKFB2O60825 505 aa15.16■□□□□ 0.02
CTSA-213ENST00000606782 CD2BP2O95400 341 aaKnown RBP15.16■□□□□ 0.02
CTSA-213ENST00000606782 GHRP10912 638 aa15.16■□□□□ 0.02
CTSA-213ENST00000606782 MCM2P49736 904 aa15.16■□□□□ 0.02
CTSA-213ENST00000606782 MRPS6P82932 125 aaKnown RBP15.16■□□□□ 0.02
CTSA-213ENST00000606782 ME3Q16798 604 aa15.16■□□□□ 0.02
CTSA-213ENST00000606782 AAK1Q2M2I8 961 aa15.16■□□□□ 0.02
CTSA-213ENST00000606782 IER5Q5VY09 327 aa15.16■□□□□ 0.02
CTSA-213ENST00000606782 MICALL1Q8N3F8 863 aa15.16■□□□□ 0.02
CTSA-213ENST00000606782 NME8Q8N427 588 aa15.16■□□□□ 0.02
CTSA-213ENST00000606782 BICD2Q8TD16 824 aa15.16■□□□□ 0.02
CTSA-213ENST00000606782 GDPD5Q8WTR4 605 aa15.16■□□□□ 0.02
CTSA-213ENST00000606782 PHKBQ93100 1093 aa15.16■□□□□ 0.02
CTSA-213ENST00000606782 ZSCAN31Q96LW9 406 aaPredicted RBP15.16■□□□□ 0.02
CTSA-213ENST00000606782 SH3GLB2Q9NR46 395 aa15.16■□□□□ 0.02
CTSA-213ENST00000606782 TBC1D22BQ9NU19 505 aa15.16■□□□□ 0.02
CTSA-213ENST00000606782 CDY2AQ9Y6F7 541 aa15.16■□□□□ 0.02
CTSA-213ENST00000606782 KDM3AQ9Y4C1 1321 aa15.16■□□□□ 0.02
CTSA-213ENST00000606782 SMIM35A0A1B0GVV1 85 aa15.15■□□□□ 0.02
CTSA-213ENST00000606782 POTEB3A0JP26 581 aa15.15■□□□□ 0.02
CTSA-213ENST00000606782 IPO5O00410 1097 aaKnown RBP15.15■□□□□ 0.02
CTSA-213ENST00000606782 ENPP3O14638 875 aa15.15■□□□□ 0.02
CTSA-213ENST00000606782 EDIL3O43854 480 aa15.15■□□□□ 0.02
CTSA-213ENST00000606782 HBP1O60381 514 aa15.15■□□□□ 0.02
CTSA-213ENST00000606782 IGBP1P78318 339 aa15.15■□□□□ 0.02
CTSA-213ENST00000606782 SETQ01105 290 aaPredicted RBP15.15■□□□□ 0.02
CTSA-213ENST00000606782 AKAP17AQ02040 695 aaKnown RBP15.15■□□□□ 0.02
CTSA-213ENST00000606782 POTEBQ6S5H4 581 aa15.15■□□□□ 0.02
CTSA-213ENST00000606782 TSHZ1Q6ZSZ6 1077 aa15.15■□□□□ 0.02
CTSA-213ENST00000606782 CCDC148Q8NFR7 591 aa15.15■□□□□ 0.02
CTSA-213ENST00000606782 ATP8B4Q8TF62 1192 aa15.15■□□□□ 0.02
CTSA-213ENST00000606782 C17orf80Q9BSJ5 609 aa15.15■□□□□ 0.02
CTSA-213ENST00000606782 AGO3Q9H9G7 860 aaKnown RBP15.15■□□□□ 0.02
CTSA-213ENST00000606782 RC3H2Q9HBD1 1191 aaKnown RBP15.15■□□□□ 0.02
CTSA-213ENST00000606782 TRPC6Q9Y210 931 aa15.15■□□□□ 0.02
CTSA-213ENST00000606782 COL4A4P53420 1690 aaPredicted RBP15.15■□□□□ 0.02
CTSA-213ENST00000606782 REV3LO60673 3130 aa15.15■□□□□ 0.02
CTSA-213ENST00000606782 COL1A2P08123 1366 aa15.14■□□□□ 0.01
CTSA-213ENST00000606782 TNFRSF10AO00220 468 aa15.14■□□□□ 0.01
CTSA-213ENST00000606782 CCT2P78371 535 aaKnown RBP15.14■□□□□ 0.01
CTSA-213ENST00000606782 TFF2Q03403 129 aa15.14■□□□□ 0.01
CTSA-213ENST00000606782 EPC2Q52LR7 807 aa15.14■□□□□ 0.01
CTSA-213ENST00000606782 FAM160B1Q5W0V3 765 aa15.14■□□□□ 0.01
CTSA-213ENST00000606782 ZNF746Q6NUN9 644 aaPredicted RBP15.14■□□□□ 0.01
CTSA-213ENST00000606782 MTHFD1LQ6UB35 978 aa15.14■□□□□ 0.01
CTSA-213ENST00000606782 CCDC60Q8IWA6 550 aaPredicted RBP15.14■□□□□ 0.01
CTSA-213ENST00000606782 FAM177A1Q8N128 213 aaPredicted RBP15.14■□□□□ 0.01
CTSA-213ENST00000606782 CRIPAKQ8N1N5 446 aa15.14■□□□□ 0.01
CTSA-213ENST00000606782 FBXO22Q8NEZ5 403 aa15.14■□□□□ 0.01
CTSA-213ENST00000606782 ADAMTS19Q8TE59 1207 aa15.14■□□□□ 0.01
CTSA-213ENST00000606782 SNX21Q969T3 373 aa15.14■□□□□ 0.01
CTSA-213ENST00000606782 LENG9Q96B70 501 aa15.14■□□□□ 0.01
CTSA-213ENST00000606782 ZBTB10Q96DT7 871 aa15.14■□□□□ 0.01
CTSA-213ENST00000606782 YME1L1Q96TA2 773 aa15.14■□□□□ 0.01
CTSA-213ENST00000606782 SLKQ9H2G2 1235 aaPredicted RBP15.14■□□□□ 0.01
CTSA-213ENST00000606782 MTUS1Q9ULD2 1270 aa15.14■□□□□ 0.01
CTSA-213ENST00000606782 MAFBQ9Y5Q3 323 aaPredicted RBP15.14■□□□□ 0.01
CTSA-213ENST00000606782 IGSF9BQ9UPX0 1349 aa15.14■□□□□ 0.01
CTSA-213ENST00000606782 ZBTB42B2RXF5 422 aa15.13■□□□□ 0.01
CTSA-213ENST00000606782 H3BNC9 293 aa15.13■□□□□ 0.01
CTSA-213ENST00000606782 LARGE1O95461 756 aa15.13■□□□□ 0.01
CTSA-213ENST00000606782 LINC00271P0C7V0 271 aa15.13■□□□□ 0.01
CTSA-213ENST00000606782 ATP4AP20648 1035 aa15.13■□□□□ 0.01
CTSA-213ENST00000606782 USP11P51784 963 aa15.13■□□□□ 0.01
CTSA-213ENST00000606782 SCRN1Q12765 414 aa15.13■□□□□ 0.01
CTSA-213ENST00000606782 STK3Q13188 491 aa15.13■□□□□ 0.01
CTSA-213ENST00000606782 SKIV2LQ15477 1246 aaKnown RBP15.13■□□□□ 0.01
CTSA-213ENST00000606782 ZNF484Q5JVG2 852 aa15.13■□□□□ 0.01
CTSA-213ENST00000606782 MIS18BP1Q6P0N0 1132 aa15.13■□□□□ 0.01
CTSA-213ENST00000606782 SMAP1Q8IYB5 467 aaPredicted RBP15.13■□□□□ 0.01
CTSA-213ENST00000606782 TRAPPC12Q8WVT3 735 aa15.13■□□□□ 0.01
CTSA-213ENST00000606782 HLA-CQ95604 372 aa15.13■□□□□ 0.01
CTSA-213ENST00000606782 ZNF689Q96CS4 500 aaPredicted RBP15.13■□□□□ 0.01
CTSA-213ENST00000606782 ZNF577Q9BSK1 485 aa15.13■□□□□ 0.01
CTSA-213ENST00000606782 SLC26A6Q9BXS9 759 aa15.13■□□□□ 0.01
CTSA-213ENST00000606782 FTHL17Q9BXU8 183 aa15.13■□□□□ 0.01
CTSA-213ENST00000606782 CELF4Q9BZC1 486 aaKnown RBP15.13■□□□□ 0.01
CTSA-213ENST00000606782 FAM49AQ9H0Q0 323 aaPredicted RBP15.13■□□□□ 0.01
CTSA-213ENST00000606782 NCOA5Q9HCD5 579 aaKnown RBP15.13■□□□□ 0.01
CTSA-213ENST00000606782 ZNF302Q9NR11 478 aa15.13■□□□□ 0.01
CTSA-213ENST00000606782 TRPV2Q9Y5S1 764 aa15.13■□□□□ 0.01
CTSA-213ENST00000606782 MYO7AQ13402 2215 aa15.12■□□□□ 0.01
CTSA-213ENST00000606782 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.12■□□□□ 0.01
CTSA-213ENST00000606782 C5orf67F2Z3F1 127 aa15.12■□□□□ 0.01
CTSA-213ENST00000606782 BACH1O14867 736 aa15.12■□□□□ 0.01
CTSA-213ENST00000606782 UPP2O95045 317 aa15.12■□□□□ 0.01
CTSA-213ENST00000606782 KLRC1P26715 233 aa15.12■□□□□ 0.01
CTSA-213ENST00000606782 KRT76Q01546 638 aa15.12■□□□□ 0.01
CTSA-213ENST00000606782 SWSAP1Q6NVH7 229 aa15.12■□□□□ 0.01
CTSA-213ENST00000606782 PDXDC2PQ6P474 469 aa15.12■□□□□ 0.01
CTSA-213ENST00000606782 RTN4RL1Q86UN2 441 aaPredicted RBP15.12■□□□□ 0.01
CTSA-213ENST00000606782 TMEM192Q8IY95 271 aa15.12■□□□□ 0.01
CTSA-213ENST00000606782 KIAA0319LQ8IZA0 1049 aa15.12■□□□□ 0.01
CTSA-213ENST00000606782 NECAB1Q8N987 351 aa15.12■□□□□ 0.01
CTSA-213ENST00000606782 RASGRP4Q8TDF6 673 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms