RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 UBA1P22314 1058 aaKnown RBP19.58■□□□□ 0.73
SHKBP1-224ENST00000600718 CENPPQ6IPU0 288 aa19.58■□□□□ 0.73
SHKBP1-224ENST00000600718 EEPD1Q7L9B9 569 aa19.58■□□□□ 0.73
SHKBP1-224ENST00000600718 MYOCDQ8IZQ8 938 aa19.58■□□□□ 0.73
SHKBP1-224ENST00000600718 GABBR1Q9UBS5 961 aa19.58■□□□□ 0.73
SHKBP1-224ENST00000600718 CPA4Q9UI42 421 aa19.58■□□□□ 0.73
SHKBP1-224ENST00000600718 DIS3Q9Y2L1 958 aaKnown RBP19.58■□□□□ 0.73
SHKBP1-224ENST00000600718 KIAA1217Q5T5P2 1943 aa19.58■□□□□ 0.72
SHKBP1-224ENST00000600718 TOMM70O94826 608 aa19.57■□□□□ 0.72
SHKBP1-224ENST00000600718 SUPT20HL2P0C7V6 817 aa19.57■□□□□ 0.72
SHKBP1-224ENST00000600718 RARRES1P49788 294 aa19.57■□□□□ 0.72
SHKBP1-224ENST00000600718 PMS1P54277 932 aaKnown RBP19.57■□□□□ 0.72
SHKBP1-224ENST00000600718 GRB14Q14449 540 aa19.57■□□□□ 0.72
SHKBP1-224ENST00000600718 HSP90AA2PQ14568 343 aaPredicted RBP19.57■□□□□ 0.72
SHKBP1-224ENST00000600718 SWSAP1Q6NVH7 229 aa19.57■□□□□ 0.72
SHKBP1-224ENST00000600718 FOXR2Q6PJQ5 311 aa19.57■□□□□ 0.72
SHKBP1-224ENST00000600718 PADI6Q6TGC4 694 aa19.57■□□□□ 0.72
SHKBP1-224ENST00000600718 OTUD6AQ7L8S5 288 aa19.57■□□□□ 0.72
SHKBP1-224ENST00000600718 DDX41Q9UJV9 622 aaKnown RBP19.57■□□□□ 0.72
SHKBP1-224ENST00000600718 TRIM49BA6NDI0 452 aa19.57■□□□□ 0.72
SHKBP1-224ENST00000600718 SLC15A5A6NIM6 579 aa19.57■□□□□ 0.72
SHKBP1-224ENST00000600718 FAM13AO94988 1023 aa19.57■□□□□ 0.72
SHKBP1-224ENST00000600718 SPAG1Q07617 926 aa19.57■□□□□ 0.72
SHKBP1-224ENST00000600718 HSP90AA4PQ58FG1 418 aa19.57■□□□□ 0.72
SHKBP1-224ENST00000600718 ANKRD40Q6AI12 368 aa19.57■□□□□ 0.72
SHKBP1-224ENST00000600718 TRIM47Q96LD4 638 aa19.57■□□□□ 0.72
SHKBP1-224ENST00000600718 CCDC43Q96MW1 224 aaKnown RBP19.57■□□□□ 0.72
SHKBP1-224ENST00000600718 THAP9Q9H5L6 903 aa19.57■□□□□ 0.72
SHKBP1-224ENST00000600718 FARP2O94887 1054 aaPredicted RBP19.56■□□□□ 0.72
SHKBP1-224ENST00000600718 SP4Q02446 784 aa19.56■□□□□ 0.72
SHKBP1-224ENST00000600718 LRRC41Q15345 812 aa19.56■□□□□ 0.72
SHKBP1-224ENST00000600718 METTL7BQ6UX53 244 aa19.56■□□□□ 0.72
SHKBP1-224ENST00000600718 ARMCX2Q7L311 632 aa19.56■□□□□ 0.72
SHKBP1-224ENST00000600718 DPP9Q86TI2 863 aa19.56■□□□□ 0.72
SHKBP1-224ENST00000600718 SFR1Q86XK3 245 aa19.56■□□□□ 0.72
SHKBP1-224ENST00000600718 SPC24Q8NBT2 197 aa19.56■□□□□ 0.72
SHKBP1-224ENST00000600718 CTAGE1Q96RT6 745 aa19.56■□□□□ 0.72
SHKBP1-224ENST00000600718 DUSP9Q99956 384 aaKnown RBP19.56■□□□□ 0.72
SHKBP1-224ENST00000600718 TIPINQ9BVW5 301 aa19.56■□□□□ 0.72
SHKBP1-224ENST00000600718 SEMA6BQ9H3T3 888 aa19.56■□□□□ 0.72
SHKBP1-224ENST00000600718 ZFYVE28Q9HCC9 887 aa19.56■□□□□ 0.72
SHKBP1-224ENST00000600718 TBC1D7Q9P0N9 293 aa19.56■□□□□ 0.72
SHKBP1-224ENST00000600718 SEL1LQ9UBV2 794 aa19.56■□□□□ 0.72
SHKBP1-224ENST00000600718 SYNGAP1Q96PV0 1343 aa19.56■□□□□ 0.72
SHKBP1-224ENST00000600718 RSPH10B2B2RC85 870 aa19.55■□□□□ 0.72
SHKBP1-224ENST00000600718 TLR2O60603 784 aa19.55■□□□□ 0.72
SHKBP1-224ENST00000600718 TPM3P06753 285 aa19.55■□□□□ 0.72
SHKBP1-224ENST00000600718 RSPH10BP0C881 870 aa19.55■□□□□ 0.72
SHKBP1-224ENST00000600718 TM4SF4P48230 202 aa19.55■□□□□ 0.72
SHKBP1-224ENST00000600718 C17orf99Q6UX52 265 aa19.55■□□□□ 0.72
SHKBP1-224ENST00000600718 PARVGQ9HBI0 331 aa19.55■□□□□ 0.72
SHKBP1-224ENST00000600718 OLFML3Q9NRN5 406 aa19.55■□□□□ 0.72
SHKBP1-224ENST00000600718 SLC5A4Q9NY91 659 aa19.55■□□□□ 0.72
SHKBP1-224ENST00000600718 LRRC37A2A6NM11 1700 aa19.55■□□□□ 0.72
SHKBP1-224ENST00000600718 LOXHD1Q8IVV2 1947 aa19.55■□□□□ 0.72
SHKBP1-224ENST00000600718 ZNFX1Q9P2E3 1918 aaKnown RBP19.55■□□□□ 0.72
SHKBP1-224ENST00000600718 SORBS3O60504 671 aa19.55■□□□□ 0.72
SHKBP1-224ENST00000600718 GGPS1O95749 300 aa19.55■□□□□ 0.72
SHKBP1-224ENST00000600718 ZNF131P52739 623 aa19.55■□□□□ 0.72
SHKBP1-224ENST00000600718 LRRC63Q05C16 580 aa19.55■□□□□ 0.72
SHKBP1-224ENST00000600718 LY6KQ17RY6 165 aa19.55■□□□□ 0.72
SHKBP1-224ENST00000600718 CCDC62Q6P9F0 684 aa19.55■□□□□ 0.72
SHKBP1-224ENST00000600718 MAMDC4Q6UXC1 1216 aa19.55■□□□□ 0.72
SHKBP1-224ENST00000600718 CCDC60Q8IWA6 550 aaPredicted RBP19.55■□□□□ 0.72
SHKBP1-224ENST00000600718 CSGALNACT2Q8N6G5 542 aa19.55■□□□□ 0.72
SHKBP1-224ENST00000600718 GLIS3Q8NEA6 775 aa19.55■□□□□ 0.72
SHKBP1-224ENST00000600718 ANKRD20A12PQ8NF67 263 aa19.55■□□□□ 0.72
SHKBP1-224ENST00000600718 SRRTQ9BXP5 876 aaKnown RBP19.55■□□□□ 0.72
SHKBP1-224ENST00000600718 MLXIPQ9HAP2 919 aa19.55■□□□□ 0.72
SHKBP1-224ENST00000600718 TELO2Q9Y4R8 837 aa19.55■□□□□ 0.72
SHKBP1-224ENST00000600718 IGKV6D-21A0A0A0MT36 114 aa19.54■□□□□ 0.72
SHKBP1-224ENST00000600718 BACH1O14867 736 aa19.54■□□□□ 0.72
SHKBP1-224ENST00000600718 ZNF862O60290 1169 aa19.54■□□□□ 0.72
SHKBP1-224ENST00000600718 STBD1O95210 358 aa19.54■□□□□ 0.72
SHKBP1-224ENST00000600718 TTLL4Q14679 1199 aa19.54■□□□□ 0.72
SHKBP1-224ENST00000600718 XKR9Q5GH70 373 aa19.54■□□□□ 0.72
SHKBP1-224ENST00000600718 CELF3Q5SZQ8 465 aaKnown RBP19.54■□□□□ 0.72
SHKBP1-224ENST00000600718 FBXO16Q8IX29 292 aaPredicted RBP19.54■□□□□ 0.72
SHKBP1-224ENST00000600718 MYCT1Q8N699 235 aa19.54■□□□□ 0.72
SHKBP1-224ENST00000600718 SEPT1Q8WYJ6 367 aa19.54■□□□□ 0.72
SHKBP1-224ENST00000600718 TSG101Q99816 390 aa19.54■□□□□ 0.72
SHKBP1-224ENST00000600718 VTA1Q9NP79 307 aa19.54■□□□□ 0.72
SHKBP1-224ENST00000600718 LIMA1Q9UHB6 759 aaKnown RBP19.54■□□□□ 0.72
SHKBP1-224ENST00000600718 PLXNB2O15031 1838 aa19.54■□□□□ 0.72
SHKBP1-224ENST00000600718 GSTTP1A0A1W2PQM5 241 aa19.53■□□□□ 0.72
SHKBP1-224ENST00000600718 LRRC10BA6NIK2 292 aa19.53■□□□□ 0.72
SHKBP1-224ENST00000600718 ARIH2O95376 493 aa19.53■□□□□ 0.72
SHKBP1-224ENST00000600718 FGFR1OPO95684 399 aaKnown RBP19.53■□□□□ 0.72
SHKBP1-224ENST00000600718 TCP11X2Q5H9J9 407 aa19.53■□□□□ 0.72
SHKBP1-224ENST00000600718 UTP14CQ5TAP6 766 aaKnown RBP19.53■□□□□ 0.72
SHKBP1-224ENST00000600718 ANO5Q75V66 913 aa19.53■□□□□ 0.72
SHKBP1-224ENST00000600718 EPM2AIP1Q7L775 607 aaPredicted RBP19.53■□□□□ 0.72
SHKBP1-224ENST00000600718 SCFD2Q8WU76 684 aa19.53■□□□□ 0.72
SHKBP1-224ENST00000600718 SCFD1Q8WVM8 642 aa19.53■□□□□ 0.72
SHKBP1-224ENST00000600718 FGFBP2Q9BYJ0 223 aa19.53■□□□□ 0.72
SHKBP1-224ENST00000600718 MRPL44Q9H9J2 332 aaKnown RBP19.53■□□□□ 0.72
SHKBP1-224ENST00000600718 ZNF302Q9NR11 478 aa19.53■□□□□ 0.72
SHKBP1-224ENST00000600718 MAFBQ9Y5Q3 323 aaPredicted RBP19.53■□□□□ 0.72
SHKBP1-224ENST00000600718 IGSF9BQ9UPX0 1349 aa19.53■□□□□ 0.72
SHKBP1-224ENST00000600718 SFI1A8K8P3 1242 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms