RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 hCG_1984214I3L0E3 225 aa24.17■■□□□ 1.46
PNKP-212ENST00000599454 STAT5BP51692 787 aa24.17■■□□□ 1.46
PNKP-212ENST00000599454 ACTR2P61160 394 aa24.17■■□□□ 1.46
PNKP-212ENST00000599454 PLCB4Q15147 1175 aa24.17■■□□□ 1.46
PNKP-212ENST00000599454 SMAD2Q15796 467 aaKnown RBP24.17■■□□□ 1.46
PNKP-212ENST00000599454 CRIPAKQ8N1N5 446 aa24.17■■□□□ 1.46
PNKP-212ENST00000599454 ZNF713Q8N859 430 aaPredicted RBP24.17■■□□□ 1.46
PNKP-212ENST00000599454 PLAGL2Q9UPG8 496 aa24.17■■□□□ 1.46
PNKP-212ENST00000599454 WDR81Q562E7 1941 aa24.17■■□□□ 1.46
PNKP-212ENST00000599454 CNTNAP5Q8WYK1 1306 aa24.16■■□□□ 1.46
PNKP-212ENST00000599454 PLXNA4Q9HCM2 1894 aa24.16■■□□□ 1.46
PNKP-212ENST00000599454 SMIM35A0A1B0GVV1 85 aa24.16■■□□□ 1.46
PNKP-212ENST00000599454 NAPAP54920 295 aa24.16■■□□□ 1.46
PNKP-212ENST00000599454 PAK2Q13177 524 aa24.16■■□□□ 1.46
PNKP-212ENST00000599454 COL9A3Q14050 684 aaPredicted RBP24.16■■□□□ 1.46
PNKP-212ENST00000599454 CEP55Q53EZ4 464 aa24.16■■□□□ 1.46
PNKP-212ENST00000599454 WWC2Q6AWC2 1192 aa24.16■■□□□ 1.46
PNKP-212ENST00000599454 LRRC2Q9BYS8 371 aa24.16■■□□□ 1.46
PNKP-212ENST00000599454 CELF4Q9BZC1 486 aaKnown RBP24.16■■□□□ 1.46
PNKP-212ENST00000599454 GLT8D2Q9H1C3 349 aa24.16■■□□□ 1.46
PNKP-212ENST00000599454 PADI3Q9ULW8 664 aa24.16■■□□□ 1.46
PNKP-212ENST00000599454 MRPL42Q9Y6G3 142 aaKnown RBP24.16■■□□□ 1.46
PNKP-212ENST00000599454 ZNF318Q5VUA4 2279 aa24.15■■□□□ 1.46
PNKP-212ENST00000599454 SMAD4Q13485 552 aaKnown RBP24.15■■□□□ 1.46
PNKP-212ENST00000599454 RNF20Q5VTR2 975 aa24.15■■□□□ 1.46
PNKP-212ENST00000599454 RTN4RL1Q86UN2 441 aaPredicted RBP24.15■■□□□ 1.46
PNKP-212ENST00000599454 CYP2W1Q8TAV3 490 aa24.15■■□□□ 1.46
PNKP-212ENST00000599454 ZBTB10Q96DT7 871 aa24.15■■□□□ 1.46
PNKP-212ENST00000599454 ANO3Q9BYT9 981 aa24.15■■□□□ 1.46
PNKP-212ENST00000599454 AGO4Q9HCK5 861 aaKnown RBP24.15■■□□□ 1.46
PNKP-212ENST00000599454 ANO2Q9NQ90 1003 aa24.15■■□□□ 1.46
PNKP-212ENST00000599454 RNF216Q9NWF9 866 aaPredicted RBP24.15■■□□□ 1.46
PNKP-212ENST00000599454 MBTPS2O43462 519 aa24.14■■□□□ 1.45
PNKP-212ENST00000599454 ATG7O95352 703 aa24.14■■□□□ 1.45
PNKP-212ENST00000599454 SCG2P13521 617 aa24.14■■□□□ 1.45
PNKP-212ENST00000599454 ADCY7P51828 1080 aa24.14■■□□□ 1.45
PNKP-212ENST00000599454 KRT76Q01546 638 aa24.14■■□□□ 1.45
PNKP-212ENST00000599454 AP3B2Q13367 1082 aa24.14■■□□□ 1.45
PNKP-212ENST00000599454 APOA5Q6Q788 366 aa24.14■■□□□ 1.45
PNKP-212ENST00000599454 UIMC1Q96RL1 719 aa24.14■■□□□ 1.45
PNKP-212ENST00000599454 ALG13Q9NP73 1137 aaKnown RBP24.14■■□□□ 1.45
PNKP-212ENST00000599454 CD207Q9UJ71 328 aa24.14■■□□□ 1.45
PNKP-212ENST00000599454 MEIS1O00470 390 aa24.13■■□□□ 1.45
PNKP-212ENST00000599454 ARP10275 920 aa24.13■■□□□ 1.45
PNKP-212ENST00000599454 DLX2Q07687 328 aaPredicted RBP24.13■■□□□ 1.45
PNKP-212ENST00000599454 TMEM62Q0P6H9 643 aa24.13■■□□□ 1.45
PNKP-212ENST00000599454 ADAM15Q13444 863 aa24.13■■□□□ 1.45
PNKP-212ENST00000599454 CAMK1Q14012 370 aa24.13■■□□□ 1.45
PNKP-212ENST00000599454 RTN1Q16799 776 aa24.13■■□□□ 1.45
PNKP-212ENST00000599454 MTHFD1LQ6UB35 978 aa24.13■■□□□ 1.45
PNKP-212ENST00000599454 NIPA1Q7RTP0 329 aa24.13■■□□□ 1.45
PNKP-212ENST00000599454 TRAPPC12Q8WVT3 735 aa24.13■■□□□ 1.45
PNKP-212ENST00000599454 IGKV6D-21A0A0A0MT36 114 aa24.12■■□□□ 1.45
PNKP-212ENST00000599454 HBP1O60381 514 aa24.12■■□□□ 1.45
PNKP-212ENST00000599454 TBX10O75333 385 aa24.12■■□□□ 1.45
PNKP-212ENST00000599454 ITGB1P05556 798 aa24.12■■□□□ 1.45
PNKP-212ENST00000599454 IRS1P35568 1242 aa24.12■■□□□ 1.45
PNKP-212ENST00000599454 SREBF1P36956 1147 aa24.12■■□□□ 1.45
PNKP-212ENST00000599454 ITGB3BPQ13352 177 aaPredicted RBP24.12■■□□□ 1.45
PNKP-212ENST00000599454 CLUL1Q15846 466 aa24.12■■□□□ 1.45
PNKP-212ENST00000599454 ODR4Q5SWX8 454 aa24.12■■□□□ 1.45
PNKP-212ENST00000599454 FAM160B1Q5W0V3 765 aa24.12■■□□□ 1.45
PNKP-212ENST00000599454 TYW1BQ6NUM6 668 aa24.12■■□□□ 1.45
PNKP-212ENST00000599454 SPPL3Q8TCT6 385 aa24.12■■□□□ 1.45
PNKP-212ENST00000599454 KCNH6Q9H252 994 aa24.12■■□□□ 1.45
PNKP-212ENST00000599454 IGFLR1Q9H665 355 aa24.12■■□□□ 1.45
PNKP-212ENST00000599454 LRFN2Q9ULH4 789 aa24.12■■□□□ 1.45
PNKP-212ENST00000599454 COL1A2P08123 1366 aa24.12■■□□□ 1.45
PNKP-212ENST00000599454 ZBTB43O43298 467 aa24.11■■□□□ 1.45
PNKP-212ENST00000599454 SARSP49591 514 aaKnown RBP24.11■■□□□ 1.45
PNKP-212ENST00000599454 FUT2Q10981 343 aa24.11■■□□□ 1.45
PNKP-212ENST00000599454 PGBD1Q96JS3 809 aa24.11■■□□□ 1.45
PNKP-212ENST00000599454 NEK1Q96PY6 1258 aa24.11■■□□□ 1.45
PNKP-212ENST00000599454 BARHL2Q9NY43 387 aa24.11■■□□□ 1.45
PNKP-212ENST00000599454 SMCO2A6NFE2 343 aa24.1■■□□□ 1.45
PNKP-212ENST00000599454 STXBP3O00186 592 aa24.1■■□□□ 1.45
PNKP-212ENST00000599454 GTF2F1P35269 517 aaKnown RBP eCLIP24.1■■□□□ 1.45
PNKP-212ENST00000599454 ZNF76P36508 570 aa24.1■■□□□ 1.45
PNKP-212ENST00000599454 NDUFV1P49821 464 aa24.1■■□□□ 1.45
PNKP-212ENST00000599454 PAN2Q504Q3 1202 aaKnown RBP24.1■■□□□ 1.45
PNKP-212ENST00000599454 EFHBQ8N7U6 833 aa24.1■■□□□ 1.45
PNKP-212ENST00000599454 KLHL23Q8NBE8 558 aa24.1■■□□□ 1.45
PNKP-212ENST00000599454 ATP8B4Q8TF62 1192 aa24.1■■□□□ 1.45
PNKP-212ENST00000599454 TMX1Q9H3N1 280 aa24.1■■□□□ 1.45
PNKP-212ENST00000599454 V9GY48 417 aaPredicted RBP24.1■■□□□ 1.45
PNKP-212ENST00000599454 TECTAO75443 2155 aa24.1■■□□□ 1.45
PNKP-212ENST00000599454 BACH1O14867 736 aa24.09■■□□□ 1.45
PNKP-212ENST00000599454 LINC01565O15544 149 aa24.09■■□□□ 1.45
PNKP-212ENST00000599454 EYA4O95677 639 aa24.09■■□□□ 1.45
PNKP-212ENST00000599454 DNAJB1P25685 340 aa24.09■■□□□ 1.45
PNKP-212ENST00000599454 KLRC1P26715 233 aa24.09■■□□□ 1.45
PNKP-212ENST00000599454 CLK2P49760 499 aaKnown RBP24.09■■□□□ 1.45
PNKP-212ENST00000599454 RCAN1P53805 252 aa24.09■■□□□ 1.45
PNKP-212ENST00000599454 EXOSC10Q01780 885 aaKnown RBP24.09■■□□□ 1.45
PNKP-212ENST00000599454 ABHD15Q6UXT9 468 aa24.09■■□□□ 1.45
PNKP-212ENST00000599454 DHX32Q7L7V1 743 aaKnown RBP24.09■■□□□ 1.45
PNKP-212ENST00000599454 POF1BQ8WVV4 589 aa24.09■■□□□ 1.45
PNKP-212ENST00000599454 MSLNLQ96KJ4 702 aa24.09■■□□□ 1.45
PNKP-212ENST00000599454 ERVK-5Q9HDB9 667 aa24.09■■□□□ 1.45
PNKP-212ENST00000599454 C1orf112Q9NSG2 853 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms