RNA–Protein interactions for RNA: ENST00000599339.1

EBI3-202, Transcript of Epstein-Barr virus induced 3, humanhuman

TSL 2

Gene EBI3, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-202ENST00000599339 PAK2Q13177 524 aa16.64■□□□□ 0.25
EBI3-202ENST00000599339 MCTP2Q6DN12 878 aa16.64■□□□□ 0.25
EBI3-202ENST00000599339 NPAS4Q8IUM7 802 aa16.64■□□□□ 0.25
EBI3-202ENST00000599339 GJD3Q8N144 294 aa16.64■□□□□ 0.25
EBI3-202ENST00000599339 CCDC12Q8WUD4 166 aaPredicted RBP16.64■□□□□ 0.25
EBI3-202ENST00000599339 CLP1Q92989 425 aaKnown RBP16.64■□□□□ 0.25
EBI3-202ENST00000599339 ZNF689Q96CS4 500 aaPredicted RBP16.64■□□□□ 0.25
EBI3-202ENST00000599339 LRFN3Q9BTN0 628 aa16.64■□□□□ 0.25
EBI3-202ENST00000599339 CELF4Q9BZC1 486 aaKnown RBP16.64■□□□□ 0.25
EBI3-202ENST00000599339 AGO3Q9H9G7 860 aaKnown RBP16.64■□□□□ 0.25
EBI3-202ENST00000599339 RC3H2Q9HBD1 1191 aaKnown RBP16.64■□□□□ 0.25
EBI3-202ENST00000599339 RAPGEFL1Q9UHV5 662 aa16.64■□□□□ 0.25
EBI3-202ENST00000599339 HCN4Q9Y3Q4 1203 aa16.64■□□□□ 0.25
EBI3-202ENST00000599339 GRXCR2A6NFK2 248 aa16.63■□□□□ 0.25
EBI3-202ENST00000599339 H3BQ06 376 aaPredicted RBP16.63■□□□□ 0.25
EBI3-202ENST00000599339 HBP1O60381 514 aa16.63■□□□□ 0.25
EBI3-202ENST00000599339 DGKIO75912 1065 aa16.63■□□□□ 0.25
EBI3-202ENST00000599339 ATG7O95352 703 aa16.63■□□□□ 0.25
EBI3-202ENST00000599339 METAP2P50579 478 aaKnown RBP eCLIP16.63■□□□□ 0.25
EBI3-202ENST00000599339 KRT76Q01546 638 aa16.63■□□□□ 0.25
EBI3-202ENST00000599339 TMEM62Q0P6H9 643 aa16.63■□□□□ 0.25
EBI3-202ENST00000599339 ITGB3BPQ13352 177 aaPredicted RBP16.63■□□□□ 0.25
EBI3-202ENST00000599339 ADCK5Q3MIX3 580 aa16.63■□□□□ 0.25
EBI3-202ENST00000599339 MTHFD1LQ6UB35 978 aa16.63■□□□□ 0.25
EBI3-202ENST00000599339 RASEFQ8IZ41 740 aa16.63■□□□□ 0.25
EBI3-202ENST00000599339 ZBTB10Q96DT7 871 aa16.63■□□□□ 0.25
EBI3-202ENST00000599339 FAM122AQ96E09 287 aa16.63■□□□□ 0.25
EBI3-202ENST00000599339 RNF216Q9NWF9 866 aaPredicted RBP16.63■□□□□ 0.25
EBI3-202ENST00000599339 TMEM260Q9NX78 707 aa16.63■□□□□ 0.25
EBI3-202ENST00000599339 CLDND1Q9NY35 253 aa16.63■□□□□ 0.25
EBI3-202ENST00000599339 TCEAL9Q9UHQ7 104 aa16.63■□□□□ 0.25
EBI3-202ENST00000599339 IGSF9BQ9UPX0 1349 aa16.63■□□□□ 0.25
EBI3-202ENST00000599339 KDM3AQ9Y4C1 1321 aa16.63■□□□□ 0.25
EBI3-202ENST00000599339 DDX39AO00148 427 aaKnown RBP16.62■□□□□ 0.25
EBI3-202ENST00000599339 GPR37L1O60883 481 aa16.62■□□□□ 0.25
EBI3-202ENST00000599339 SCG2P13521 617 aa16.62■□□□□ 0.25
EBI3-202ENST00000599339 PLA2G5P39877 138 aa16.62■□□□□ 0.25
EBI3-202ENST00000599339 CLK2P49760 499 aaKnown RBP16.62■□□□□ 0.25
EBI3-202ENST00000599339 COL19A1Q14993 1142 aa16.62■□□□□ 0.25
EBI3-202ENST00000599339 PFKFB3Q16875 520 aaPredicted RBP16.62■□□□□ 0.25
EBI3-202ENST00000599339 NAALADL2Q58DX5 795 aa16.62■□□□□ 0.25
EBI3-202ENST00000599339 ODR4Q5SWX8 454 aa16.62■□□□□ 0.25
EBI3-202ENST00000599339 MIS18BP1Q6P0N0 1132 aa16.62■□□□□ 0.25
EBI3-202ENST00000599339 PLA2G4DQ86XP0 818 aa16.62■□□□□ 0.25
EBI3-202ENST00000599339 CMTR2Q8IYT2 770 aaKnown RBP16.62■□□□□ 0.25
EBI3-202ENST00000599339 TRAPPC12Q8WVT3 735 aa16.62■□□□□ 0.25
EBI3-202ENST00000599339 LINC01599Q8WXQ3 324 aa16.62■□□□□ 0.25
EBI3-202ENST00000599339 PPP2R3CQ969Q6 453 aa16.62■□□□□ 0.25
EBI3-202ENST00000599339 LRFN2Q9ULH4 789 aa16.62■□□□□ 0.25
EBI3-202ENST00000599339 PADI3Q9ULW8 664 aa16.62■□□□□ 0.25
EBI3-202ENST00000599339 COL1A2P08123 1366 aa16.62■□□□□ 0.25
EBI3-202ENST00000599339 MYO7AQ13402 2215 aa16.61■□□□□ 0.25
EBI3-202ENST00000599339 IGKV6D-21A0A0A0MT36 114 aa16.61■□□□□ 0.25
EBI3-202ENST00000599339 ESYT2A0FGR8 921 aa16.61■□□□□ 0.25
EBI3-202ENST00000599339 PI4K2BG5E9Z4 385 aa16.61■□□□□ 0.25
EBI3-202ENST00000599339 GRM6O15303 877 aa16.61■□□□□ 0.25
EBI3-202ENST00000599339 MMP1P03956 469 aa16.61■□□□□ 0.25
EBI3-202ENST00000599339 LINC00271P0C7V0 271 aa16.61■□□□□ 0.25
EBI3-202ENST00000599339 ALADP13716 330 aa16.61■□□□□ 0.25
EBI3-202ENST00000599339 KLRC1P26715 233 aa16.61■□□□□ 0.25
EBI3-202ENST00000599339 CDC27P30260 824 aa16.61■□□□□ 0.25
EBI3-202ENST00000599339 SETQ01105 290 aaPredicted RBP16.61■□□□□ 0.25
EBI3-202ENST00000599339 ZNF484Q5JVG2 852 aa16.61■□□□□ 0.25
EBI3-202ENST00000599339 JAKMIP3Q5VZ66 844 aa16.61■□□□□ 0.25
EBI3-202ENST00000599339 PDXDC2PQ6P474 469 aa16.61■□□□□ 0.25
EBI3-202ENST00000599339 ABHD15Q6UXT9 468 aa16.61■□□□□ 0.25
EBI3-202ENST00000599339 ATP8B4Q8TF62 1192 aa16.61■□□□□ 0.25
EBI3-202ENST00000599339 P2RX5Q93086 422 aa16.61■□□□□ 0.25
EBI3-202ENST00000599339 C6orf50Q9HD87 102 aa16.61■□□□□ 0.25
EBI3-202ENST00000599339 CD320Q9NPF0 282 aa16.61■□□□□ 0.25
EBI3-202ENST00000599339 ZNF302Q9NR11 478 aa16.61■□□□□ 0.25
EBI3-202ENST00000599339 FAM217BQ9NTX9 383 aaPredicted RBP16.61■□□□□ 0.25
EBI3-202ENST00000599339 TBC1D22BQ9NU19 505 aa16.61■□□□□ 0.25
EBI3-202ENST00000599339 PRKAG3Q9UGI9 489 aa16.61■□□□□ 0.25
EBI3-202ENST00000599339 ARIH1Q9Y4X5 557 aaPredicted RBP16.61■□□□□ 0.25
EBI3-202ENST00000599339 IPO5O00410 1097 aaKnown RBP16.6■□□□□ 0.25
EBI3-202ENST00000599339 CCNE2O96020 404 aa16.6■□□□□ 0.25
EBI3-202ENST00000599339 CYP3A4P08684 503 aa16.6■□□□□ 0.25
EBI3-202ENST00000599339 GNA11P29992 359 aa16.6■□□□□ 0.25
EBI3-202ENST00000599339 AKAP17AQ02040 695 aaKnown RBP16.6■□□□□ 0.25
EBI3-202ENST00000599339 NFX1Q12986 1120 aaKnown RBP16.6■□□□□ 0.25
EBI3-202ENST00000599339 RTN4RL1Q86UN2 441 aaPredicted RBP16.6■□□□□ 0.25
EBI3-202ENST00000599339 REXO1Q8N1G1 1221 aaKnown RBP16.6■□□□□ 0.25
EBI3-202ENST00000599339 KHSRPQ92945 711 aaKnown RBP eCLIP16.6■□□□□ 0.25
EBI3-202ENST00000599339 ZNF577Q9BSK1 485 aa16.6■□□□□ 0.25
EBI3-202ENST00000599339 GINS2Q9Y248 185 aa16.6■□□□□ 0.25
EBI3-202ENST00000599339 MRPL42Q9Y6G3 142 aaKnown RBP16.6■□□□□ 0.25
EBI3-202ENST00000599339 FAM86B1E9PN63 330 aa16.59■□□□□ 0.25
EBI3-202ENST00000599339 FAM86B2P0C5J1 330 aa16.59■□□□□ 0.25
EBI3-202ENST00000599339 ADD1P35611 737 aaKnown RBP16.59■□□□□ 0.25
EBI3-202ENST00000599339 ZNF746Q6NUN9 644 aaPredicted RBP16.59■□□□□ 0.25
EBI3-202ENST00000599339 BLOC1S2Q6QNY1 142 aa16.59■□□□□ 0.25
EBI3-202ENST00000599339 Q6ZUG5 572 aa16.59■□□□□ 0.25
EBI3-202ENST00000599339 SKAP1Q86WV1 359 aa16.59■□□□□ 0.25
EBI3-202ENST00000599339 CCDC60Q8IWA6 550 aaPredicted RBP16.59■□□□□ 0.25
EBI3-202ENST00000599339 CKAP2LQ8IYA6 745 aa16.59■□□□□ 0.25
EBI3-202ENST00000599339 ZMYND12Q9H0C1 365 aa16.59■□□□□ 0.25
EBI3-202ENST00000599339 PLAGL2Q9UPG8 496 aa16.59■□□□□ 0.25
EBI3-202ENST00000599339 IGLV3-22A0A075B6J6 115 aa16.58■□□□□ 0.24
EBI3-202ENST00000599339 GPR182O15218 404 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms