RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, humanhuman

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-209ENST00000598580 TMEM266Q2M3C6 531 aa12.61□□□□□ -0.39
GRAMD1A-209ENST00000598580 TIGD5Q53EQ6 642 aa12.61□□□□□ -0.39
GRAMD1A-209ENST00000598580 CEP55Q53EZ4 464 aa12.61□□□□□ -0.39
GRAMD1A-209ENST00000598580 ABHD15Q6UXT9 468 aa12.61□□□□□ -0.39
GRAMD1A-209ENST00000598580 PLPPR4Q7Z2D5 763 aa12.61□□□□□ -0.39
GRAMD1A-209ENST00000598580 SPPL3Q8TCT6 385 aa12.61□□□□□ -0.39
GRAMD1A-209ENST00000598580 TMEM40Q8WWA1 233 aa12.61□□□□□ -0.39
GRAMD1A-209ENST00000598580 FAM122AQ96E09 287 aa12.61□□□□□ -0.39
GRAMD1A-209ENST00000598580 ANO3Q9BYT9 981 aa12.61□□□□□ -0.39
GRAMD1A-209ENST00000598580 CLDND1Q9NY35 253 aa12.61□□□□□ -0.39
GRAMD1A-209ENST00000598580 PADI3Q9ULW8 664 aa12.61□□□□□ -0.39
GRAMD1A-209ENST00000598580 PCDHGC5Q9Y5F6 944 aa12.61□□□□□ -0.39
GRAMD1A-209ENST00000598580 PCDHA2Q9Y5H9 948 aa12.61□□□□□ -0.39
GRAMD1A-209ENST00000598580 NFASCO94856 1347 aa12.61□□□□□ -0.39
GRAMD1A-209ENST00000598580 SMCO2A6NFE2 343 aa12.6□□□□□ -0.39
GRAMD1A-209ENST00000598580 RRN3P2A6NIE6 340 aa12.6□□□□□ -0.39
GRAMD1A-209ENST00000598580 TBX10O75333 385 aa12.6□□□□□ -0.39
GRAMD1A-209ENST00000598580 ITGB1P05556 798 aa12.6□□□□□ -0.39
GRAMD1A-209ENST00000598580 HOXD11P31277 338 aaPredicted RBP12.6□□□□□ -0.39
GRAMD1A-209ENST00000598580 SSTR3P32745 418 aaPredicted RBP12.6□□□□□ -0.39
GRAMD1A-209ENST00000598580 ADD1P35611 737 aaKnown RBP12.6□□□□□ -0.39
GRAMD1A-209ENST00000598580 NAPAP54920 295 aa12.6□□□□□ -0.39
GRAMD1A-209ENST00000598580 BTG3Q14201 252 aaPredicted RBP12.6□□□□□ -0.39
GRAMD1A-209ENST00000598580 TSGA10IPQ3SY00 556 aa12.6□□□□□ -0.39
GRAMD1A-209ENST00000598580 MTHFD1LQ6UB35 978 aa12.6□□□□□ -0.39
GRAMD1A-209ENST00000598580 EP400NLQ6ZTU2 488 aa12.6□□□□□ -0.39
GRAMD1A-209ENST00000598580 DHX32Q7L7V1 743 aaKnown RBP12.6□□□□□ -0.39
GRAMD1A-209ENST00000598580 ADGRD2Q7Z7M1 963 aa12.6□□□□□ -0.39
GRAMD1A-209ENST00000598580 KIAA0319LQ8IZA0 1049 aa12.6□□□□□ -0.39
GRAMD1A-209ENST00000598580 NEK1Q96PY6 1258 aa12.6□□□□□ -0.39
GRAMD1A-209ENST00000598580 CELF4Q9BZC1 486 aaKnown RBP12.6□□□□□ -0.39
GRAMD1A-209ENST00000598580 HCSTQ9UBK5 93 aa12.6□□□□□ -0.39
GRAMD1A-209ENST00000598580 TRPC6Q9Y210 931 aa12.6□□□□□ -0.39
GRAMD1A-209ENST00000598580 ATG2AQ2TAZ0 1938 aa12.6□□□□□ -0.39
GRAMD1A-209ENST00000598580 IGSF9BQ9UPX0 1349 aa12.6□□□□□ -0.39
GRAMD1A-209ENST00000598580 IGLV3-22A0A075B6J6 115 aa12.59□□□□□ -0.39
GRAMD1A-209ENST00000598580 DDX39AO00148 427 aaKnown RBP12.59□□□□□ -0.39
GRAMD1A-209ENST00000598580 KLRC1P26715 233 aa12.59□□□□□ -0.39
GRAMD1A-209ENST00000598580 SREBF1P36956 1147 aa12.59□□□□□ -0.39
GRAMD1A-209ENST00000598580 ADAM15Q13444 863 aa12.59□□□□□ -0.39
GRAMD1A-209ENST00000598580 PKN1Q16512 942 aa12.59□□□□□ -0.39
GRAMD1A-209ENST00000598580 RTN1Q16799 776 aa12.59□□□□□ -0.39
GRAMD1A-209ENST00000598580 JAKMIP3Q5VZ66 844 aa12.59□□□□□ -0.39
GRAMD1A-209ENST00000598580 RSPH3Q86UC2 560 aa12.59□□□□□ -0.39
GRAMD1A-209ENST00000598580 CCDC60Q8IWA6 550 aaPredicted RBP12.59□□□□□ -0.39
GRAMD1A-209ENST00000598580 KLHL23Q8NBE8 558 aa12.59□□□□□ -0.39
GRAMD1A-209ENST00000598580 C11orf84Q9BUA3 381 aaPredicted RBP12.59□□□□□ -0.39
GRAMD1A-209ENST00000598580 IGFLR1Q9H665 355 aa12.59□□□□□ -0.39
GRAMD1A-209ENST00000598580 BARHL2Q9NY43 387 aa12.59□□□□□ -0.39
GRAMD1A-209ENST00000598580 CLEC1BQ9P126 229 aa12.59□□□□□ -0.39
GRAMD1A-209ENST00000598580 NOC2LQ9Y3T9 749 aaKnown RBP12.59□□□□□ -0.39
GRAMD1A-209ENST00000598580 TRPV2Q9Y5S1 764 aa12.59□□□□□ -0.39
GRAMD1A-209ENST00000598580 KAT6AQ92794 2004 aa12.59□□□□□ -0.39
GRAMD1A-209ENST00000598580 KLF18A0A0U1RQI7 1052 aa12.58□□□□□ -0.4
GRAMD1A-209ENST00000598580 SMIM35A0A1B0GVV1 85 aa12.58□□□□□ -0.4
GRAMD1A-209ENST00000598580 ZBTB43O43298 467 aa12.58□□□□□ -0.4
GRAMD1A-209ENST00000598580 PPFIA3O75145 1194 aa12.58□□□□□ -0.4
GRAMD1A-209ENST00000598580 MMP1P03956 469 aa12.58□□□□□ -0.4
GRAMD1A-209ENST00000598580 ADCY7P51828 1080 aa12.58□□□□□ -0.4
GRAMD1A-209ENST00000598580 RBM10P98175 930 aaKnown RBP12.58□□□□□ -0.4
GRAMD1A-209ENST00000598580 PAN2Q504Q3 1202 aaKnown RBP12.58□□□□□ -0.4
GRAMD1A-209ENST00000598580 BMP2KLQ5H9B9 411 aa12.58□□□□□ -0.4
GRAMD1A-209ENST00000598580 IER5Q5VY09 327 aa12.58□□□□□ -0.4
GRAMD1A-209ENST00000598580 CMTR2Q8IYT2 770 aaKnown RBP12.58□□□□□ -0.4
GRAMD1A-209ENST00000598580 LMAN2LQ9H0V9 348 aa12.58□□□□□ -0.4
GRAMD1A-209ENST00000598580 AZI2Q9H6S1 392 aa12.58□□□□□ -0.4
GRAMD1A-209ENST00000598580 ERVK-5Q9HDB9 667 aa12.58□□□□□ -0.4
GRAMD1A-209ENST00000598580 SQORQ9Y6N5 450 aa12.58□□□□□ -0.4
GRAMD1A-209ENST00000598580 KDM3AQ9Y4C1 1321 aa12.58□□□□□ -0.4
GRAMD1A-209ENST00000598580 NLRC5Q86WI3 1866 aa12.57□□□□□ -0.4
GRAMD1A-209ENST00000598580 MBTPS2O43462 519 aa12.57□□□□□ -0.4
GRAMD1A-209ENST00000598580 FOSP01100 380 aaPredicted RBP12.57□□□□□ -0.4
GRAMD1A-209ENST00000598580 SCG2P13521 617 aa12.57□□□□□ -0.4
GRAMD1A-209ENST00000598580 KRT76Q01546 638 aa12.57□□□□□ -0.4
GRAMD1A-209ENST00000598580 SMAD2Q15796 467 aaKnown RBP12.57□□□□□ -0.4
GRAMD1A-209ENST00000598580 PUS10Q3MIT2 529 aaKnown RBP12.57□□□□□ -0.4
GRAMD1A-209ENST00000598580 FAM102BQ5T8I3 360 aa12.57□□□□□ -0.4
GRAMD1A-209ENST00000598580 SWSAP1Q6NVH7 229 aa12.57□□□□□ -0.4
GRAMD1A-209ENST00000598580 PPP1R18Q6NYC8 613 aa12.57□□□□□ -0.4
GRAMD1A-209ENST00000598580 NPAS4Q8IUM7 802 aa12.57□□□□□ -0.4
GRAMD1A-209ENST00000598580 ADHFE1Q8IWW8 467 aa12.57□□□□□ -0.4
GRAMD1A-209ENST00000598580 ATP8B4Q8TF62 1192 aa12.57□□□□□ -0.4
GRAMD1A-209ENST00000598580 KCNB2Q92953 911 aa12.57□□□□□ -0.4
GRAMD1A-209ENST00000598580 MSLNLQ96KJ4 702 aa12.57□□□□□ -0.4
GRAMD1A-209ENST00000598580 SDF4Q9BRK5 362 aa12.57□□□□□ -0.4
GRAMD1A-209ENST00000598580 PLVAPQ9BX97 442 aa12.57□□□□□ -0.4
GRAMD1A-209ENST00000598580 RBM28Q9NW13 759 aaKnown RBP12.57□□□□□ -0.4
GRAMD1A-209ENST00000598580 ARIH1Q9Y4X5 557 aaPredicted RBP12.57□□□□□ -0.4
GRAMD1A-209ENST00000598580 GOLGA8AA7E2F4 631 aa12.56□□□□□ -0.4
GRAMD1A-209ENST00000598580 GOLGA8BA8MQT2 603 aa12.56□□□□□ -0.4
GRAMD1A-209ENST00000598580 PRR33A8MZF0 331 aa12.56□□□□□ -0.4
GRAMD1A-209ENST00000598580 C22orf31O95567 290 aa12.56□□□□□ -0.4
GRAMD1A-209ENST00000598580 GLP2RO95838 553 aa12.56□□□□□ -0.4
GRAMD1A-209ENST00000598580 CYP3A4P08684 503 aa12.56□□□□□ -0.4
GRAMD1A-209ENST00000598580 IBSPP21815 317 aaPredicted RBP12.56□□□□□ -0.4
GRAMD1A-209ENST00000598580 APOBRQ0VD83 1088 aa12.56□□□□□ -0.4
GRAMD1A-209ENST00000598580 PAK2Q13177 524 aa12.56□□□□□ -0.4
GRAMD1A-209ENST00000598580 PFKFB3Q16875 520 aaPredicted RBP12.56□□□□□ -0.4
GRAMD1A-209ENST00000598580 SYNE3Q6ZMZ3 975 aa12.56□□□□□ -0.4
GRAMD1A-209ENST00000598580 NIPA1Q7RTP0 329 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms