RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 TMEM266Q2M3C6 531 aa18.35■□□□□ 0.53
LIM2-202ENST00000596399 JAKMIP3Q5VZ66 844 aa18.35■□□□□ 0.53
LIM2-202ENST00000596399 PLPPR4Q7Z2D5 763 aa18.35■□□□□ 0.53
LIM2-202ENST00000596399 CRIPAKQ8N1N5 446 aa18.35■□□□□ 0.53
LIM2-202ENST00000596399 PABPC5Q96DU9 382 aaKnown RBP18.35■□□□□ 0.53
LIM2-202ENST00000596399 CDHR5Q9HBB8 845 aa18.35■□□□□ 0.53
LIM2-202ENST00000596399 BARHL2Q9NY43 387 aa18.35■□□□□ 0.53
LIM2-202ENST00000596399 NAP1L2Q9ULW6 460 aaPredicted RBP18.35■□□□□ 0.53
LIM2-202ENST00000596399 PCDHA2Q9Y5H9 948 aa18.35■□□□□ 0.53
LIM2-202ENST00000596399 TRPV2Q9Y5S1 764 aa18.35■□□□□ 0.53
LIM2-202ENST00000596399 MRPL42Q9Y6G3 142 aaKnown RBP18.35■□□□□ 0.53
LIM2-202ENST00000596399 POTEB3A0JP26 581 aa18.34■□□□□ 0.53
LIM2-202ENST00000596399 FAM86B1E9PN63 330 aa18.34■□□□□ 0.53
LIM2-202ENST00000596399 PPFIA3O75145 1194 aa18.34■□□□□ 0.53
LIM2-202ENST00000596399 FAM86B2P0C5J1 330 aa18.34■□□□□ 0.53
LIM2-202ENST00000596399 HYAL1Q12794 435 aa18.34■□□□□ 0.53
LIM2-202ENST00000596399 CAMK1Q14012 370 aa18.34■□□□□ 0.53
LIM2-202ENST00000596399 COL19A1Q14993 1142 aa18.34■□□□□ 0.53
LIM2-202ENST00000596399 PAN2Q504Q3 1202 aaKnown RBP18.34■□□□□ 0.53
LIM2-202ENST00000596399 IER5Q5VY09 327 aa18.34■□□□□ 0.53
LIM2-202ENST00000596399 PPP1R18Q6NYC8 613 aa18.34■□□□□ 0.53
LIM2-202ENST00000596399 POTEBQ6S5H4 581 aa18.34■□□□□ 0.53
LIM2-202ENST00000596399 MTHFD1LQ6UB35 978 aa18.34■□□□□ 0.53
LIM2-202ENST00000596399 CLP1Q92989 425 aaKnown RBP18.34■□□□□ 0.53
LIM2-202ENST00000596399 TMX1Q9H3N1 280 aa18.34■□□□□ 0.53
LIM2-202ENST00000596399 TTC3P53804 2025 aa18.33■□□□□ 0.53
LIM2-202ENST00000596399 LOXHD1Q8IVV2 1947 aa18.33■□□□□ 0.53
LIM2-202ENST00000596399 ATG7O95352 703 aa18.33■□□□□ 0.52
LIM2-202ENST00000596399 FOSP01100 380 aaPredicted RBP18.33■□□□□ 0.52
LIM2-202ENST00000596399 RB1P06400 928 aa18.33■□□□□ 0.52
LIM2-202ENST00000596399 DNAJB1P25685 340 aa18.33■□□□□ 0.52
LIM2-202ENST00000596399 ZNF76P36508 570 aa18.33■□□□□ 0.52
LIM2-202ENST00000596399 SREBF1P36956 1147 aa18.33■□□□□ 0.52
LIM2-202ENST00000596399 PLA2G5P39877 138 aa18.33■□□□□ 0.52
LIM2-202ENST00000596399 APOBRQ0VD83 1088 aa18.33■□□□□ 0.52
LIM2-202ENST00000596399 ABHD15Q6UXT9 468 aa18.33■□□□□ 0.52
LIM2-202ENST00000596399 CCDC60Q8IWA6 550 aaPredicted RBP18.33■□□□□ 0.52
LIM2-202ENST00000596399 C11orf84Q9BUA3 381 aaPredicted RBP18.33■□□□□ 0.52
LIM2-202ENST00000596399 CELF4Q9BZC1 486 aaKnown RBP18.33■□□□□ 0.52
LIM2-202ENST00000596399 IGFLR1Q9H665 355 aa18.33■□□□□ 0.52
LIM2-202ENST00000596399 GINS2Q9Y248 185 aa18.33■□□□□ 0.52
LIM2-202ENST00000596399 IGSF9BQ9UPX0 1349 aa18.32■□□□□ 0.52
LIM2-202ENST00000596399 IGKV6D-21A0A0A0MT36 114 aa18.32■□□□□ 0.52
LIM2-202ENST00000596399 LINC01565O15544 149 aa18.32■□□□□ 0.52
LIM2-202ENST00000596399 DHX15O43143 795 aaKnown RBP18.32■□□□□ 0.52
LIM2-202ENST00000596399 GPR37L1O60883 481 aa18.32■□□□□ 0.52
LIM2-202ENST00000596399 ATP4AP20648 1035 aa18.32■□□□□ 0.52
LIM2-202ENST00000596399 KLRC1P26715 233 aa18.32■□□□□ 0.52
LIM2-202ENST00000596399 PAK2Q13177 524 aa18.32■□□□□ 0.52
LIM2-202ENST00000596399 TSGA10IPQ3SY00 556 aa18.32■□□□□ 0.52
LIM2-202ENST00000596399 TRMT1LQ7Z2T5 733 aaKnown RBP18.32■□□□□ 0.52
LIM2-202ENST00000596399 PLA2G4DQ86XP0 818 aa18.32■□□□□ 0.52
LIM2-202ENST00000596399 FAM122AQ96E09 287 aa18.32■□□□□ 0.52
LIM2-202ENST00000596399 PPP1R16BQ96T49 567 aa18.32■□□□□ 0.52
LIM2-202ENST00000596399 KIAA1671Q9BY89 1806 aa18.31■□□□□ 0.52
LIM2-202ENST00000596399 IGLV3-22A0A075B6J6 115 aa18.31■□□□□ 0.52
LIM2-202ENST00000596399 SMIM35A0A1B0GVV1 85 aa18.31■□□□□ 0.52
LIM2-202ENST00000596399 M0QZ92 97 aa18.31■□□□□ 0.52
LIM2-202ENST00000596399 BACH1O14867 736 aa18.31■□□□□ 0.52
LIM2-202ENST00000596399 MGEA5O60502 916 aa18.31■□□□□ 0.52
LIM2-202ENST00000596399 KRT76Q01546 638 aa18.31■□□□□ 0.52
LIM2-202ENST00000596399 CTC1Q2NKJ3 1217 aa18.31■□□□□ 0.52
LIM2-202ENST00000596399 TMEM40Q8WWA1 233 aa18.31■□□□□ 0.52
LIM2-202ENST00000596399 PLAGL2Q9UPG8 496 aa18.31■□□□□ 0.52
LIM2-202ENST00000596399 NOC2LQ9Y3T9 749 aaKnown RBP18.31■□□□□ 0.52
LIM2-202ENST00000596399 ZBTB42B2RXF5 422 aa18.3■□□□□ 0.52
LIM2-202ENST00000596399 hCG_1984214I3L0E3 225 aa18.3■□□□□ 0.52
LIM2-202ENST00000596399 ITGB1P05556 798 aa18.3■□□□□ 0.52
LIM2-202ENST00000596399 IRS1P35568 1242 aa18.3■□□□□ 0.52
LIM2-202ENST00000596399 METAP2P50579 478 aaKnown RBP eCLIP18.3■□□□□ 0.52
LIM2-202ENST00000596399 NFX1Q12986 1120 aaKnown RBP18.3■□□□□ 0.52
LIM2-202ENST00000596399 AP3B2Q13367 1082 aa18.3■□□□□ 0.52
LIM2-202ENST00000596399 PFKFB3Q16875 520 aaPredicted RBP18.3■□□□□ 0.52
LIM2-202ENST00000596399 SWSAP1Q6NVH7 229 aa18.3■□□□□ 0.52
LIM2-202ENST00000596399 Q6ZUG5 572 aa18.3■□□□□ 0.52
LIM2-202ENST00000596399 CENPQQ7L2Z9 268 aaPredicted RBP18.3■□□□□ 0.52
LIM2-202ENST00000596399 NPAS4Q8IUM7 802 aa18.3■□□□□ 0.52
LIM2-202ENST00000596399 KIAA0319LQ8IZA0 1049 aa18.3■□□□□ 0.52
LIM2-202ENST00000596399 ZNF713Q8N859 430 aaPredicted RBP18.3■□□□□ 0.52
LIM2-202ENST00000596399 ATP8B4Q8TF62 1192 aa18.3■□□□□ 0.52
LIM2-202ENST00000596399 CRYGNQ8WXF5 182 aa18.3■□□□□ 0.52
LIM2-202ENST00000596399 ZNF302Q9NR11 478 aa18.3■□□□□ 0.52
LIM2-202ENST00000596399 RWDD3Q9Y3V2 267 aa18.3■□□□□ 0.52
LIM2-202ENST00000596399 PCDHGC5Q9Y5F6 944 aa18.3■□□□□ 0.52
LIM2-202ENST00000596399 SQORQ9Y6N5 450 aa18.3■□□□□ 0.52
LIM2-202ENST00000596399 TBX10O75333 385 aa18.29■□□□□ 0.52
LIM2-202ENST00000596399 CDC45O75419 566 aa18.29■□□□□ 0.52
LIM2-202ENST00000596399 MMP1P03956 469 aa18.29■□□□□ 0.52
LIM2-202ENST00000596399 SCG2P13521 617 aa18.29■□□□□ 0.52
LIM2-202ENST00000596399 FGD1P98174 961 aa18.29■□□□□ 0.52
LIM2-202ENST00000596399 ZP2Q05996 745 aa18.29■□□□□ 0.52
LIM2-202ENST00000596399 PKN1Q16512 942 aa18.29■□□□□ 0.52
LIM2-202ENST00000596399 PUS10Q3MIT2 529 aaKnown RBP18.29■□□□□ 0.52
LIM2-202ENST00000596399 PDXDC2PQ6P474 469 aa18.29■□□□□ 0.52
LIM2-202ENST00000596399 ADGRD2Q7Z7M1 963 aa18.29■□□□□ 0.52
LIM2-202ENST00000596399 CMTR2Q8IYT2 770 aaKnown RBP18.29■□□□□ 0.52
LIM2-202ENST00000596399 KLHL23Q8NBE8 558 aa18.29■□□□□ 0.52
LIM2-202ENST00000596399 SPPL3Q8TCT6 385 aa18.29■□□□□ 0.52
LIM2-202ENST00000596399 RASGRP4Q8TDF6 673 aa18.29■□□□□ 0.52
LIM2-202ENST00000596399 BRF1Q92994 677 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms