RNA–Protein interactions for RNA: ENST00000596351.5

LTBP4-215, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 2

Gene LTBP4, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-215	ENST00000596351	PLA2G4D	Q86XP0	818 aa		13.76	□□□□□ -0.21
LTBP4-215	ENST00000596351	CCDC60	Q8IWA6	550 aa	Predicted RBP	13.76	□□□□□ -0.21
LTBP4-215	ENST00000596351	FIBCD1	Q8N539	461 aa		13.76	□□□□□ -0.21
LTBP4-215	ENST00000596351	RASGRP4	Q8TDF6	673 aa		13.76	□□□□□ -0.21
LTBP4-215	ENST00000596351	CRYGN	Q8WXF5	182 aa		13.76	□□□□□ -0.21
LTBP4-215	ENST00000596351	IL17RA	Q96F46	866 aa		13.76	□□□□□ -0.21
LTBP4-215	ENST00000596351	CCDC136	Q96JN2	1154 aa		13.76	□□□□□ -0.21
LTBP4-215	ENST00000596351	SAMD11	Q96NU1	681 aa		13.76	□□□□□ -0.21
LTBP4-215	ENST00000596351	TRPV2	Q9Y5S1	764 aa		13.76	□□□□□ -0.21
LTBP4-215	ENST00000596351	IGKV6D-21	A0A0A0MT36	114 aa		13.75	□□□□□ -0.21
LTBP4-215	ENST00000596351	DHX15	O43143	795 aa	Known RBP	13.75	□□□□□ -0.21
LTBP4-215	ENST00000596351	CSPG5	O95196	566 aa		13.75	□□□□□ -0.21
LTBP4-215	ENST00000596351	ATG7	O95352	703 aa		13.75	□□□□□ -0.21
LTBP4-215	ENST00000596351	COL9A1	P20849	921 aa		13.75	□□□□□ -0.21
LTBP4-215	ENST00000596351	RPS6KB1	P23443	525 aa		13.75	□□□□□ -0.21
LTBP4-215	ENST00000596351	ABHD15	Q6UXT9	468 aa		13.75	□□□□□ -0.21
LTBP4-215	ENST00000596351	NIPA1	Q7RTP0	329 aa		13.75	□□□□□ -0.21
LTBP4-215	ENST00000596351	GLT8D2	Q9H1C3	349 aa		13.75	□□□□□ -0.21
LTBP4-215	ENST00000596351	NCOA5	Q9HCD5	579 aa	Known RBP	13.75	□□□□□ -0.21
LTBP4-215	ENST00000596351	PCDHA2	Q9Y5H9	948 aa		13.75	□□□□□ -0.21
LTBP4-215	ENST00000596351	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.74	□□□□□ -0.21
LTBP4-215	ENST00000596351	CCDC196	A0A1B0GTZ2	297 aa		13.74	□□□□□ -0.21
LTBP4-215	ENST00000596351	ESYT2	A0FGR8	921 aa		13.74	□□□□□ -0.21
LTBP4-215	ENST00000596351		M0QZ92	97 aa		13.74	□□□□□ -0.21
LTBP4-215	ENST00000596351	IPO5	O00410	1097 aa	Known RBP	13.74	□□□□□ -0.21
LTBP4-215	ENST00000596351	IBSP	P21815	317 aa	Predicted RBP	13.74	□□□□□ -0.21
LTBP4-215	ENST00000596351	CCT2	P78371	535 aa	Known RBP	13.74	□□□□□ -0.21
LTBP4-215	ENST00000596351	PTPRO	Q16827	1216 aa		13.74	□□□□□ -0.21
LTBP4-215	ENST00000596351	TMEM266	Q2M3C6	531 aa		13.74	□□□□□ -0.21
LTBP4-215	ENST00000596351	TCEAL5	Q5H9L2	206 aa		13.74	□□□□□ -0.21
LTBP4-215	ENST00000596351	IER5	Q5VY09	327 aa		13.74	□□□□□ -0.21
LTBP4-215	ENST00000596351	MTHFD1L	Q6UB35	978 aa		13.74	□□□□□ -0.21
LTBP4-215	ENST00000596351	TRMT1L	Q7Z2T5	733 aa	Known RBP	13.74	□□□□□ -0.21
LTBP4-215	ENST00000596351	RTN4RL1	Q86UN2	441 aa	Predicted RBP	13.74	□□□□□ -0.21
LTBP4-215	ENST00000596351	TEX2	Q8IWB9	1127 aa		13.74	□□□□□ -0.21
LTBP4-215	ENST00000596351	REXO1	Q8N1G1	1221 aa	Known RBP	13.74	□□□□□ -0.21
LTBP4-215	ENST00000596351	BANK1	Q8NDB2	785 aa		13.74	□□□□□ -0.21
LTBP4-215	ENST00000596351	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
LTBP4-215	ENST00000596351	PPP1R16B	Q96T49	567 aa		13.74	□□□□□ -0.21
LTBP4-215	ENST00000596351	ZMYND12	Q9H0C1	365 aa		13.74	□□□□□ -0.21
LTBP4-215	ENST00000596351	C6orf50	Q9HD87	102 aa		13.74	□□□□□ -0.21
LTBP4-215	ENST00000596351	ZNF302	Q9NR11	478 aa		13.74	□□□□□ -0.21
LTBP4-215	ENST00000596351	PADI3	Q9ULW8	664 aa		13.74	□□□□□ -0.21
LTBP4-215	ENST00000596351	GINS2	Q9Y248	185 aa		13.74	□□□□□ -0.21
LTBP4-215	ENST00000596351	IGSF9B	Q9UPX0	1349 aa		13.73	□□□□□ -0.21
LTBP4-215	ENST00000596351	SMIM35	A0A1B0GVV1	85 aa		13.73	□□□□□ -0.21
LTBP4-215	ENST00000596351		H3BQ06	376 aa	Predicted RBP	13.73	□□□□□ -0.21
LTBP4-215	ENST00000596351	GRM6	O15303	877 aa		13.73	□□□□□ -0.21
LTBP4-215	ENST00000596351	PRPF3	O43395	683 aa	Known RBP	13.73	□□□□□ -0.21
LTBP4-215	ENST00000596351	CYP3A4	P08684	503 aa		13.73	□□□□□ -0.21
LTBP4-215	ENST00000596351	IL9	P15248	144 aa		13.73	□□□□□ -0.21
LTBP4-215	ENST00000596351	ATP4A	P20648	1035 aa		13.73	□□□□□ -0.21
LTBP4-215	ENST00000596351	KLRC1	P26715	233 aa		13.73	□□□□□ -0.21
LTBP4-215	ENST00000596351	GATM	P50440	423 aa		13.73	□□□□□ -0.21
LTBP4-215	ENST00000596351	KRT76	Q01546	638 aa		13.73	□□□□□ -0.21
LTBP4-215	ENST00000596351	PAK2	Q13177	524 aa		13.73	□□□□□ -0.21
LTBP4-215	ENST00000596351	BTG3	Q14201	252 aa	Predicted RBP	13.73	□□□□□ -0.21
LTBP4-215	ENST00000596351	NTRK3	Q16288	839 aa		13.73	□□□□□ -0.21
LTBP4-215	ENST00000596351	TIGD5	Q53EQ6	642 aa		13.73	□□□□□ -0.21
LTBP4-215	ENST00000596351	FAM160B1	Q5W0V3	765 aa		13.73	□□□□□ -0.21
LTBP4-215	ENST00000596351	SWSAP1	Q6NVH7	229 aa		13.73	□□□□□ -0.21
LTBP4-215	ENST00000596351	PDXDC2P	Q6P474	469 aa		13.73	□□□□□ -0.21
LTBP4-215	ENST00000596351	EP400NL	Q6ZTU2	488 aa		13.73	□□□□□ -0.21
LTBP4-215	ENST00000596351	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	13.73	□□□□□ -0.21
LTBP4-215	ENST00000596351	ATP8B4	Q8TF62	1192 aa		13.73	□□□□□ -0.21
LTBP4-215	ENST00000596351	ZNF689	Q96CS4	500 aa	Predicted RBP	13.73	□□□□□ -0.21
LTBP4-215	ENST00000596351	ZNF577	Q9BSK1	485 aa		13.73	□□□□□ -0.21
LTBP4-215	ENST00000596351	SLC26A6	Q9BXS9	759 aa		13.73	□□□□□ -0.21
LTBP4-215	ENST00000596351	AGXT2	Q9BYV1	514 aa		13.73	□□□□□ -0.21
LTBP4-215	ENST00000596351	CELF4	Q9BZC1	486 aa	Known RBP	13.73	□□□□□ -0.21
LTBP4-215	ENST00000596351	TMX1	Q9H3N1	280 aa		13.73	□□□□□ -0.21
LTBP4-215	ENST00000596351	EPHX3	Q9H6B9	360 aa		13.73	□□□□□ -0.21
LTBP4-215	ENST00000596351	CDHR5	Q9HBB8	845 aa		13.73	□□□□□ -0.21
LTBP4-215	ENST00000596351	CD320	Q9NPF0	282 aa		13.73	□□□□□ -0.21
LTBP4-215	ENST00000596351	VPS54	Q9P1Q0	977 aa		13.73	□□□□□ -0.21
LTBP4-215	ENST00000596351	ZBTB42	B2RXF5	422 aa		13.72	□□□□□ -0.21
LTBP4-215	ENST00000596351	HBP1	O60381	514 aa		13.72	□□□□□ -0.21
LTBP4-215	ENST00000596351	DGKI	O75912	1065 aa		13.72	□□□□□ -0.21
LTBP4-215	ENST00000596351	BMPR1A	P36894	532 aa		13.72	□□□□□ -0.21
LTBP4-215	ENST00000596351	SLC26A2	P50443	739 aa		13.72	□□□□□ -0.21
LTBP4-215	ENST00000596351	LEXM	Q3ZCV2	418 aa		13.72	□□□□□ -0.21
LTBP4-215	ENST00000596351	PAN2	Q504Q3	1202 aa	Known RBP	13.72	□□□□□ -0.21
LTBP4-215	ENST00000596351	PRR16	Q569H4	304 aa		13.72	□□□□□ -0.21
LTBP4-215	ENST00000596351	MIS18BP1	Q6P0N0	1132 aa		13.72	□□□□□ -0.21
LTBP4-215	ENST00000596351	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.72	□□□□□ -0.21
LTBP4-215	ENST00000596351	TMEM40	Q8WWA1	233 aa		13.72	□□□□□ -0.21
LTBP4-215	ENST00000596351	TNPO1	Q92973	898 aa	Known RBP	13.72	□□□□□ -0.21
LTBP4-215	ENST00000596351	NSUN3	Q9H649	340 aa	Known RBP	13.72	□□□□□ -0.21
LTBP4-215	ENST00000596351	MRPL42	Q9Y6G3	142 aa	Known RBP	13.72	□□□□□ -0.21
LTBP4-215	ENST00000596351	TRIO	O75962	3097 aa		13.72	□□□□□ -0.21
LTBP4-215	ENST00000596351	KDM3A	Q9Y4C1	1321 aa		13.71	□□□□□ -0.21
LTBP4-215	ENST00000596351	C5orf67	F2Z3F1	127 aa		13.71	□□□□□ -0.21
LTBP4-215	ENST00000596351	MGEA5	O60502	916 aa		13.71	□□□□□ -0.21
LTBP4-215	ENST00000596351	REC8	O95072	547 aa		13.71	□□□□□ -0.21
LTBP4-215	ENST00000596351	RPLP2	P05387	115 aa	Known RBP	13.71	□□□□□ -0.21
LTBP4-215	ENST00000596351	PDIA3	P30101	505 aa	Known RBP	13.71	□□□□□ -0.21
LTBP4-215	ENST00000596351	SET	Q01105	290 aa	Predicted RBP	13.71	□□□□□ -0.21
LTBP4-215	ENST00000596351	AKAP17A	Q02040	695 aa	Known RBP	13.71	□□□□□ -0.21
LTBP4-215	ENST00000596351	NFX1	Q12986	1120 aa	Known RBP	13.71	□□□□□ -0.21
LTBP4-215	ENST00000596351	TOB2	Q14106	344 aa	Predicted RBP	13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 695.9 ms