RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 PIK3R5Q8WYR1 880 aa18.06■□□□□ 0.48
LIG1-206ENST00000594067 TAF4BQ92750 862 aa18.06■□□□□ 0.48
LIG1-206ENST00000594067 RNPC3Q96LT9 517 aaKnown RBP18.06■□□□□ 0.48
LIG1-206ENST00000594067 ZC3H12CQ9C0D7 883 aaKnown RBP18.06■□□□□ 0.48
LIG1-206ENST00000594067 AFPP02771 609 aaKnown RBP18.06■□□□□ 0.48
LIG1-206ENST00000594067 TAL1P17542 331 aaPredicted RBP18.06■□□□□ 0.48
LIG1-206ENST00000594067 TCP10Q12799 353 aa18.06■□□□□ 0.48
LIG1-206ENST00000594067 KNOP1Q1ED39 458 aaKnown RBP18.06■□□□□ 0.48
LIG1-206ENST00000594067 EMC10Q5UCC4 262 aa18.06■□□□□ 0.48
LIG1-206ENST00000594067 APOBEC3HQ6NTF7 200 aaKnown RBP18.06■□□□□ 0.48
LIG1-206ENST00000594067 USP38Q8NB14 1042 aa18.06■□□□□ 0.48
LIG1-206ENST00000594067 ETNPPLQ8TBG4 499 aa18.06■□□□□ 0.48
LIG1-206ENST00000594067 DNM3Q9UQ16 869 aa18.06■□□□□ 0.48
LIG1-206ENST00000594067 SUGT1Q9Y2Z0 365 aa18.06■□□□□ 0.48
LIG1-206ENST00000594067 ARFGEF1Q9Y6D6 1849 aa18.05■□□□□ 0.48
LIG1-206ENST00000594067 RPS6KA1Q15418 735 aa18.05■□□□□ 0.48
LIG1-206ENST00000594067 EXOC3L4Q17RC7 722 aa18.05■□□□□ 0.48
LIG1-206ENST00000594067 KDM7AQ6ZMT4 941 aa18.05■□□□□ 0.48
LIG1-206ENST00000594067 SP8Q8IXZ3 490 aa18.05■□□□□ 0.48
LIG1-206ENST00000594067 MBOAT7Q96N66 472 aa18.05■□□□□ 0.48
LIG1-206ENST00000594067 GLT8D2Q9H1C3 349 aa18.05■□□□□ 0.48
LIG1-206ENST00000594067 RSPH10B2B2RC85 870 aa18.05■□□□□ 0.48
LIG1-206ENST00000594067 RSPH10BP0C881 870 aa18.05■□□□□ 0.48
LIG1-206ENST00000594067 SPATA31C1P0DKV0 1188 aa18.05■□□□□ 0.48
LIG1-206ENST00000594067 PON1P27169 355 aa18.05■□□□□ 0.48
LIG1-206ENST00000594067 CYP4A11Q02928 519 aa18.05■□□□□ 0.48
LIG1-206ENST00000594067 USH1GQ495M9 461 aa18.05■□□□□ 0.48
LIG1-206ENST00000594067 TCERG1LQ5VWI1 586 aa18.05■□□□□ 0.48
LIG1-206ENST00000594067 FRMD5Q7Z6J6 570 aa18.05■□□□□ 0.48
LIG1-206ENST00000594067 TRAF3IP3Q9Y228 551 aa18.05■□□□□ 0.48
LIG1-206ENST00000594067 PCDHAC2Q9Y5I4 1007 aa18.05■□□□□ 0.48
LIG1-206ENST00000594067 ATXN2Q99700 1313 aaKnown RBP18.04■□□□□ 0.48
LIG1-206ENST00000594067 ZEB2O60315 1214 aa18.04■□□□□ 0.48
LIG1-206ENST00000594067 AKAP3O75969 853 aa18.04■□□□□ 0.48
LIG1-206ENST00000594067 LSP1P33241 339 aa18.04■□□□□ 0.48
LIG1-206ENST00000594067 MREGQ8N565 214 aa18.04■□□□□ 0.48
LIG1-206ENST00000594067 SYT2Q8N9I0 419 aaPredicted RBP18.04■□□□□ 0.48
LIG1-206ENST00000594067 RBM46Q8TBY0 533 aaKnown RBP18.04■□□□□ 0.48
LIG1-206ENST00000594067 AJAP1Q9UKB5 411 aaPredicted RBP18.04■□□□□ 0.48
LIG1-206ENST00000594067 FNTAP49354 379 aa18.04■□□□□ 0.48
LIG1-206ENST00000594067 CASP4P49662 377 aa18.04■□□□□ 0.48
LIG1-206ENST00000594067 TNNC1P63316 161 aa18.04■□□□□ 0.48
LIG1-206ENST00000594067 GUCY1A3Q02108 690 aa18.04■□□□□ 0.48
LIG1-206ENST00000594067 KCTD19Q17RG1 926 aaPredicted RBP18.04■□□□□ 0.48
LIG1-206ENST00000594067 CD302Q8IX05 232 aa18.04■□□□□ 0.48
LIG1-206ENST00000594067 ERMNQ8TAM6 284 aa18.04■□□□□ 0.48
LIG1-206ENST00000594067 TEKT1Q969V4 418 aa18.04■□□□□ 0.48
LIG1-206ENST00000594067 CCDC17Q96LX7 622 aa18.04■□□□□ 0.48
LIG1-206ENST00000594067 GEMIN8Q9NWZ8 242 aaKnown RBP18.04■□□□□ 0.48
LIG1-206ENST00000594067 LY75O60449 1722 aa18.03■□□□□ 0.48
LIG1-206ENST00000594067 CLIC2O15247 247 aa18.03■□□□□ 0.48
LIG1-206ENST00000594067 MEFVO15553 781 aaPredicted RBP18.03■□□□□ 0.48
LIG1-206ENST00000594067 CLSTN1O94985 981 aa18.03■□□□□ 0.48
LIG1-206ENST00000594067 KIF4AO95239 1232 aa18.03■□□□□ 0.48
LIG1-206ENST00000594067 XRCC5P13010 732 aaKnown RBP18.03■□□□□ 0.48
LIG1-206ENST00000594067 EPM2AIP1Q7L775 607 aaPredicted RBP18.03■□□□□ 0.48
LIG1-206ENST00000594067 CNPY4Q8N129 248 aa18.03■□□□□ 0.48
LIG1-206ENST00000594067 PROCA1Q8NCQ7 364 aaPredicted RBP18.03■□□□□ 0.48
LIG1-206ENST00000594067 EPN3Q9H201 632 aa18.03■□□□□ 0.48
LIG1-206ENST00000594067 PLCB1Q9NQ66 1216 aa18.03■□□□□ 0.48
LIG1-206ENST00000594067 NAGPAQ9UK23 515 aa18.03■□□□□ 0.48
LIG1-206ENST00000594067 C10orf71Q711Q0 1435 aa18.03■□□□□ 0.48
LIG1-206ENST00000594067 FAM86B1E9PN63 330 aa18.03■□□□□ 0.48
LIG1-206ENST00000594067 POLRMTO00411 1230 aaKnown RBP18.03■□□□□ 0.48
LIG1-206ENST00000594067 CEP104O60308 925 aa18.03■□□□□ 0.48
LIG1-206ENST00000594067 FAM86B2P0C5J1 330 aa18.03■□□□□ 0.48
LIG1-206ENST00000594067 RPA1P27694 616 aa18.03■□□□□ 0.48
LIG1-206ENST00000594067 AP3B2Q13367 1082 aa18.03■□□□□ 0.48
LIG1-206ENST00000594067 ALKBH5Q6P6C2 394 aaKnown RBP18.03■□□□□ 0.48
LIG1-206ENST00000594067 GJB7Q6PEY0 223 aa18.03■□□□□ 0.48
LIG1-206ENST00000594067 PRPF38AQ8NAV1 312 aaKnown RBP18.03■□□□□ 0.48
LIG1-206ENST00000594067 CRYGNQ8WXF5 182 aa18.03■□□□□ 0.48
LIG1-206ENST00000594067 LENG9Q96B70 501 aa18.03■□□□□ 0.48
LIG1-206ENST00000594067 CAPN7Q9Y6W3 813 aa18.03■□□□□ 0.48
LIG1-206ENST00000594067 SLC26A4O43511 780 aa18.02■□□□□ 0.48
LIG1-206ENST00000594067 CALUO43852 315 aaPredicted RBP18.02■□□□□ 0.48
LIG1-206ENST00000594067 KCNA1Q09470 495 aa18.02■□□□□ 0.48
LIG1-206ENST00000594067 CERKLQ49MI3 558 aaPredicted RBP18.02■□□□□ 0.48
LIG1-206ENST00000594067 DCAF4Q8WV16 495 aa18.02■□□□□ 0.48
LIG1-206ENST00000594067 NCAPGQ9BPX3 1015 aa18.02■□□□□ 0.48
LIG1-206ENST00000594067 BHMT2Q9H2M3 363 aa18.02■□□□□ 0.48
LIG1-206ENST00000594067 DNAJC5Q9H3Z4 198 aa18.02■□□□□ 0.48
LIG1-206ENST00000594067 MYH4Q9Y623 1939 aa18.02■□□□□ 0.48
LIG1-206ENST00000594067 DDTLA6NHG4 134 aaPredicted RBP18.02■□□□□ 0.47
LIG1-206ENST00000594067 BTNL10A8MVZ5 291 aa18.02■□□□□ 0.47
LIG1-206ENST00000594067 IKQ13123 557 aaPredicted RBP18.02■□□□□ 0.47
LIG1-206ENST00000594067 EPHA7Q15375 998 aa18.02■□□□□ 0.47
LIG1-206ENST00000594067 C10orf76Q5T2E6 689 aa18.02■□□□□ 0.47
LIG1-206ENST00000594067 NAA35Q5VZE5 725 aa18.02■□□□□ 0.47
LIG1-206ENST00000594067 MOXD1Q6UVY6 613 aa18.02■□□□□ 0.47
LIG1-206ENST00000594067 OTUD6BQ8N6M0 293 aa18.02■□□□□ 0.47
LIG1-206ENST00000594067 PAGR1Q9BTK6 254 aa18.02■□□□□ 0.47
LIG1-206ENST00000594067 RUSC1Q9BVN2 902 aa18.02■□□□□ 0.47
LIG1-206ENST00000594067 TMEM59LQ9UK28 342 aa18.02■□□□□ 0.47
LIG1-206ENST00000594067 ADAMTSL1Q8N6G6 1762 aa18.01■□□□□ 0.47
LIG1-206ENST00000594067 SFI1A8K8P3 1242 aa18.01■□□□□ 0.47
LIG1-206ENST00000594067 G3V3G9 751 aa18.01■□□□□ 0.47
LIG1-206ENST00000594067 PDXKO00764 312 aa18.01■□□□□ 0.47
LIG1-206ENST00000594067 GCNT3O95395 438 aa18.01■□□□□ 0.47
LIG1-206ENST00000594067 NR3C1P04150 777 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms