RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 PRKAG3Q9UGI9 489 aa18.68■□□□□ 0.58
LIG1-205ENST00000593425 BRPF3Q9ULD4 1205 aa18.68■□□□□ 0.58
LIG1-205ENST00000593425 FAM50BQ9Y247 325 aa18.68■□□□□ 0.58
LIG1-205ENST00000593425 PCDHA2Q9Y5H9 948 aa18.68■□□□□ 0.58
LIG1-205ENST00000593425 C19orf67A6NJJ6 358 aa18.67■□□□□ 0.58
LIG1-205ENST00000593425 M0QZ92 97 aa18.67■□□□□ 0.58
LIG1-205ENST00000593425 STXBP3O00186 592 aa18.67■□□□□ 0.58
LIG1-205ENST00000593425 LINC01565O15544 149 aa18.67■□□□□ 0.58
LIG1-205ENST00000593425 NCK2O43639 380 aa18.67■□□□□ 0.58
LIG1-205ENST00000593425 ALADP13716 330 aa18.67■□□□□ 0.58
LIG1-205ENST00000593425 DNAJB1P25685 340 aa18.67■□□□□ 0.58
LIG1-205ENST00000593425 GATMP50440 423 aa18.67■□□□□ 0.58
LIG1-205ENST00000593425 ADCY7P51828 1080 aa18.67■□□□□ 0.58
LIG1-205ENST00000593425 PAN2Q504Q3 1202 aaKnown RBP18.67■□□□□ 0.58
LIG1-205ENST00000593425 CEP55Q53EZ4 464 aa18.67■□□□□ 0.58
LIG1-205ENST00000593425 PPP1R18Q6NYC8 613 aa18.67■□□□□ 0.58
LIG1-205ENST00000593425 SYNE3Q6ZMZ3 975 aa18.67■□□□□ 0.58
LIG1-205ENST00000593425 PLPPR4Q7Z2D5 763 aa18.67■□□□□ 0.58
LIG1-205ENST00000593425 NPAS4Q8IUM7 802 aa18.67■□□□□ 0.58
LIG1-205ENST00000593425 CMTR2Q8IYT2 770 aaKnown RBP18.67■□□□□ 0.58
LIG1-205ENST00000593425 NEK1Q96PY6 1258 aa18.67■□□□□ 0.58
LIG1-205ENST00000593425 PLVAPQ9BX97 442 aa18.67■□□□□ 0.58
LIG1-205ENST00000593425 FTHL17Q9BXU8 183 aa18.67■□□□□ 0.58
LIG1-205ENST00000593425 CELF4Q9BZC1 486 aaKnown RBP18.67■□□□□ 0.58
LIG1-205ENST00000593425 TMX1Q9H3N1 280 aa18.67■□□□□ 0.58
LIG1-205ENST00000593425 RBM28Q9NW13 759 aaKnown RBP18.67■□□□□ 0.58
LIG1-205ENST00000593425 PLAGL2Q9UPG8 496 aa18.67■□□□□ 0.58
LIG1-205ENST00000593425 SMIM35A0A1B0GVV1 85 aa18.66■□□□□ 0.58
LIG1-205ENST00000593425 DDX39AO00148 427 aaKnown RBP18.66■□□□□ 0.58
LIG1-205ENST00000593425 MBTPS2O43462 519 aa18.66■□□□□ 0.58
LIG1-205ENST00000593425 DCXO43602 365 aa18.66■□□□□ 0.58
LIG1-205ENST00000593425 ATG7O95352 703 aa18.66■□□□□ 0.58
LIG1-205ENST00000593425 CCNE2O96020 404 aa18.66■□□□□ 0.58
LIG1-205ENST00000593425 ITGB1P05556 798 aa18.66■□□□□ 0.58
LIG1-205ENST00000593425 CLK2P49760 499 aaKnown RBP18.66■□□□□ 0.58
LIG1-205ENST00000593425 EXOSC10Q01780 885 aaKnown RBP18.66■□□□□ 0.58
LIG1-205ENST00000593425 PAK2Q13177 524 aa18.66■□□□□ 0.58
LIG1-205ENST00000593425 RTN1Q16799 776 aa18.66■□□□□ 0.58
LIG1-205ENST00000593425 TMEM266Q2M3C6 531 aa18.66■□□□□ 0.58
LIG1-205ENST00000593425 MTHFD1LQ6UB35 978 aa18.66■□□□□ 0.58
LIG1-205ENST00000593425 SKAP1Q86WV1 359 aa18.66■□□□□ 0.58
LIG1-205ENST00000593425 ADHFE1Q8IWW8 467 aa18.66■□□□□ 0.58
LIG1-205ENST00000593425 P2RX5Q93086 422 aa18.66■□□□□ 0.58
LIG1-205ENST00000593425 IGFLR1Q9H665 355 aa18.66■□□□□ 0.58
LIG1-205ENST00000593425 FNDC1Q4ZHG4 1894 aaPredicted RBP18.66■□□□□ 0.58
LIG1-205ENST00000593425 KDM3AQ9Y4C1 1321 aa18.66■□□□□ 0.58
LIG1-205ENST00000593425 IGKV6D-21A0A0A0MT36 114 aa18.65■□□□□ 0.58
LIG1-205ENST00000593425 SMCO2A6NFE2 343 aa18.65■□□□□ 0.58
LIG1-205ENST00000593425 MEIS1O00470 390 aa18.65■□□□□ 0.58
LIG1-205ENST00000593425 FOSP01100 380 aaPredicted RBP18.65■□□□□ 0.58
LIG1-205ENST00000593425 SCG2P13521 617 aa18.65■□□□□ 0.58
LIG1-205ENST00000593425 IRS1P35568 1242 aa18.65■□□□□ 0.58
LIG1-205ENST00000593425 SREBF1P36956 1147 aa18.65■□□□□ 0.58
LIG1-205ENST00000593425 SMAD2Q15796 467 aaKnown RBP18.65■□□□□ 0.58
LIG1-205ENST00000593425 ADCK5Q3MIX3 580 aa18.65■□□□□ 0.58
LIG1-205ENST00000593425 ADGRD2Q7Z7M1 963 aa18.65■□□□□ 0.58
LIG1-205ENST00000593425 TNPO1Q92973 898 aaKnown RBP18.65■□□□□ 0.58
LIG1-205ENST00000593425 FAM217BQ9NTX9 383 aaPredicted RBP18.65■□□□□ 0.58
LIG1-205ENST00000593425 V9GY48 417 aaPredicted RBP18.65■□□□□ 0.58
LIG1-205ENST00000593425 ZBTB43O43298 467 aa18.64■□□□□ 0.57
LIG1-205ENST00000593425 MGEA5O60502 916 aa18.64■□□□□ 0.57
LIG1-205ENST00000593425 STAG3L1P0CL83 205 aa18.64■□□□□ 0.57
LIG1-205ENST00000593425 CDC27P30260 824 aa18.64■□□□□ 0.57
LIG1-205ENST00000593425 KRT76Q01546 638 aa18.64■□□□□ 0.57
LIG1-205ENST00000593425 AP3B2Q13367 1082 aa18.64■□□□□ 0.57
LIG1-205ENST00000593425 RNF20Q5VTR2 975 aa18.64■□□□□ 0.57
LIG1-205ENST00000593425 ABHD15Q6UXT9 468 aa18.64■□□□□ 0.57
LIG1-205ENST00000593425 CCDC60Q8IWA6 550 aaPredicted RBP18.64■□□□□ 0.57
LIG1-205ENST00000593425 RASEFQ8IZ41 740 aa18.64■□□□□ 0.57
LIG1-205ENST00000593425 KLHL23Q8NBE8 558 aa18.64■□□□□ 0.57
LIG1-205ENST00000593425 SPPL3Q8TCT6 385 aa18.64■□□□□ 0.57
LIG1-205ENST00000593425 BARHL2Q9NY43 387 aa18.64■□□□□ 0.57
LIG1-205ENST00000593425 EVPLQ92817 2033 aa18.63■□□□□ 0.57
LIG1-205ENST00000593425 GOLGA8AA7E2F4 631 aa18.63■□□□□ 0.57
LIG1-205ENST00000593425 GOLGA8BA8MQT2 603 aa18.63■□□□□ 0.57
LIG1-205ENST00000593425 FAM86B1E9PN63 330 aa18.63■□□□□ 0.57
LIG1-205ENST00000593425 hCG_1984214I3L0E3 225 aa18.63■□□□□ 0.57
LIG1-205ENST00000593425 ADAMTS3O15072 1205 aa18.63■□□□□ 0.57
LIG1-205ENST00000593425 FAM86B2P0C5J1 330 aa18.63■□□□□ 0.57
LIG1-205ENST00000593425 IBSPP21815 317 aaPredicted RBP18.63■□□□□ 0.57
LIG1-205ENST00000593425 KLRC1P26715 233 aa18.63■□□□□ 0.57
LIG1-205ENST00000593425 NFX1Q12986 1120 aaKnown RBP18.63■□□□□ 0.57
LIG1-205ENST00000593425 ADAM15Q13444 863 aa18.63■□□□□ 0.57
LIG1-205ENST00000593425 SMAD4Q13485 552 aaKnown RBP18.63■□□□□ 0.57
LIG1-205ENST00000593425 DHX32Q7L7V1 743 aaKnown RBP18.63■□□□□ 0.57
LIG1-205ENST00000593425 TEX2Q8IWB9 1127 aa18.63■□□□□ 0.57
LIG1-205ENST00000593425 NME8Q8N427 588 aa18.63■□□□□ 0.57
LIG1-205ENST00000593425 ZNF713Q8N859 430 aaPredicted RBP18.63■□□□□ 0.57
LIG1-205ENST00000593425 TMEM40Q8WWA1 233 aa18.63■□□□□ 0.57
LIG1-205ENST00000593425 UIMC1Q96RL1 719 aa18.63■□□□□ 0.57
LIG1-205ENST00000593425 CDHR5Q9HBB8 845 aa18.63■□□□□ 0.57
LIG1-205ENST00000593425 ERVK-5Q9HDB9 667 aa18.63■□□□□ 0.57
LIG1-205ENST00000593425 GINS2Q9Y248 185 aa18.63■□□□□ 0.57
LIG1-205ENST00000593425 NOC2LQ9Y3T9 749 aaKnown RBP18.63■□□□□ 0.57
LIG1-205ENST00000593425 IGLV3-22A0A075B6J6 115 aa18.62■□□□□ 0.57
LIG1-205ENST00000593425 KLF18A0A0U1RQI7 1052 aa18.62■□□□□ 0.57
LIG1-205ENST00000593425 BACH1O14867 736 aa18.62■□□□□ 0.57
LIG1-205ENST00000593425 HBP1O60381 514 aa18.62■□□□□ 0.57
LIG1-205ENST00000593425 ZNF76P36508 570 aa18.62■□□□□ 0.57
LIG1-205ENST00000593425 SLC26A2P50443 739 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms