RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 ATP8A1Q9Y2Q0 1164 aa13.76□□□□□ -0.21
DNMT1-228ENST00000592705 STAM2O75886 525 aa13.76□□□□□ -0.21
DNMT1-228ENST00000592705 OATP04181 439 aa13.76□□□□□ -0.21
DNMT1-228ENST00000592705 CDK8P49336 464 aa13.76□□□□□ -0.21
DNMT1-228ENST00000592705 IFRD2Q12894 506 aaPredicted RBP13.76□□□□□ -0.21
DNMT1-228ENST00000592705 GABPB2Q8TAK5 448 aaPredicted RBP13.76□□□□□ -0.21
DNMT1-228ENST00000592705 ACCSQ96QU6 501 aa13.76□□□□□ -0.21
DNMT1-228ENST00000592705 TMEM206Q9H813 350 aa13.76□□□□□ -0.21
DNMT1-228ENST00000592705 PIDD1Q9HB75 910 aa13.76□□□□□ -0.21
DNMT1-228ENST00000592705 CEP72Q9P209 647 aa13.76□□□□□ -0.21
DNMT1-228ENST00000592705 CPDO75976 1380 aa13.76□□□□□ -0.21
DNMT1-228ENST00000592705 INO80Q9ULG1 1556 aaPredicted RBP13.76□□□□□ -0.21
DNMT1-228ENST00000592705 CASP1P29466 404 aa13.76□□□□□ -0.21
DNMT1-228ENST00000592705 FCGRTP55899 365 aa13.76□□□□□ -0.21
DNMT1-228ENST00000592705 IRX5P78411 483 aaPredicted RBP13.76□□□□□ -0.21
DNMT1-228ENST00000592705 SLC7A5Q01650 507 aa13.76□□□□□ -0.21
DNMT1-228ENST00000592705 GABPAQ06546 454 aa13.76□□□□□ -0.21
DNMT1-228ENST00000592705 ATP2A3Q93084 1043 aa13.76□□□□□ -0.21
DNMT1-228ENST00000592705 FAM81BQ96LP2 452 aa13.76□□□□□ -0.21
DNMT1-228ENST00000592705 TRIM49BA6NDI0 452 aa13.76□□□□□ -0.21
DNMT1-228ENST00000592705 MYO1FO00160 1098 aa13.76□□□□□ -0.21
DNMT1-228ENST00000592705 GFPT2O94808 682 aa13.76□□□□□ -0.21
DNMT1-228ENST00000592705 DLATP10515 647 aaKnown RBP13.76□□□□□ -0.21
DNMT1-228ENST00000592705 PLTPP55058 493 aa13.76□□□□□ -0.21
DNMT1-228ENST00000592705 CDC37Q16543 378 aaPredicted RBP13.76□□□□□ -0.21
DNMT1-228ENST00000592705 SDCCAG8Q86SQ7 713 aaPredicted RBP13.76□□□□□ -0.21
DNMT1-228ENST00000592705 METTL16Q86W50 562 aaKnown RBP13.76□□□□□ -0.21
DNMT1-228ENST00000592705 ADARB2Q9NS39 739 aaKnown RBP13.76□□□□□ -0.21
DNMT1-228ENST00000592705 NRXN1Q9ULB1 1477 aa13.75□□□□□ -0.21
DNMT1-228ENST00000592705 PVALEFA0A1B0GWK0 134 aa13.75□□□□□ -0.21
DNMT1-228ENST00000592705 SLMAPQ14BN4 828 aa13.75□□□□□ -0.21
DNMT1-228ENST00000592705 PDXDC2PQ6P474 469 aa13.75□□□□□ -0.21
DNMT1-228ENST00000592705 POLIQ9UNA4 740 aa13.75□□□□□ -0.21
DNMT1-228ENST00000592705 GSG1L2A8MUP6 293 aa13.75□□□□□ -0.21
DNMT1-228ENST00000592705 CCDC188H7C350 402 aa13.75□□□□□ -0.21
DNMT1-228ENST00000592705 TEX33O43247 280 aa13.75□□□□□ -0.21
DNMT1-228ENST00000592705 SLC16A2P36021 539 aa13.75□□□□□ -0.21
DNMT1-228ENST00000592705 ARPP19P56211 112 aa13.75□□□□□ -0.21
DNMT1-228ENST00000592705 IL9RQ01113 521 aa13.75□□□□□ -0.21
DNMT1-228ENST00000592705 SCARF1Q14162 830 aa13.75□□□□□ -0.21
DNMT1-228ENST00000592705 ACTR5Q9H9F9 607 aaPredicted RBP13.75□□□□□ -0.21
DNMT1-228ENST00000592705 FEM1BQ9UK73 627 aa13.75□□□□□ -0.21
DNMT1-228ENST00000592705 PTPN22Q9Y2R2 807 aa13.75□□□□□ -0.21
DNMT1-228ENST00000592705 CNTNAP4Q9C0A0 1308 aa13.75□□□□□ -0.21
DNMT1-228ENST00000592705 ECEL1O95672 775 aa13.75□□□□□ -0.21
DNMT1-228ENST00000592705 BFSP1Q12934 665 aa13.75□□□□□ -0.21
DNMT1-228ENST00000592705 CTAGE3PQ8IX95 158 aa13.75□□□□□ -0.21
DNMT1-228ENST00000592705 AFAP1L2Q8N4X5 818 aa13.75□□□□□ -0.21
DNMT1-228ENST00000592705 ANKRD7Q92527 254 aa13.75□□□□□ -0.21
DNMT1-228ENST00000592705 PNPLA7Q6ZV29 1317 aa13.75□□□□□ -0.21
DNMT1-228ENST00000592705 A0A1W2PQC6 194 aa13.75□□□□□ -0.21
DNMT1-228ENST00000592705 DPYSL4O14531 572 aa13.75□□□□□ -0.21
DNMT1-228ENST00000592705 CLIC2O15247 247 aa13.75□□□□□ -0.21
DNMT1-228ENST00000592705 NOL3O60936 208 aaKnown RBP13.75□□□□□ -0.21
DNMT1-228ENST00000592705 CLTAP09496 248 aa13.75□□□□□ -0.21
DNMT1-228ENST00000592705 EIF2AK2P19525 551 aaKnown RBP13.75□□□□□ -0.21
DNMT1-228ENST00000592705 E4F1Q66K89 784 aaPredicted RBP13.75□□□□□ -0.21
DNMT1-228ENST00000592705 RSBN1LQ6PCB5 846 aaPredicted RBP13.75□□□□□ -0.21
DNMT1-228ENST00000592705 ELMOD1Q8N336 334 aa13.75□□□□□ -0.21
DNMT1-228ENST00000592705 GBA2Q9HCG7 927 aaPredicted RBP13.75□□□□□ -0.21
DNMT1-228ENST00000592705 FBXO2Q9UK22 296 aaPredicted RBP13.75□□□□□ -0.21
DNMT1-228ENST00000592705 ZNF148Q9UQR1 794 aa13.75□□□□□ -0.21
DNMT1-228ENST00000592705 DIS3Q9Y2L1 958 aaKnown RBP13.75□□□□□ -0.21
DNMT1-228ENST00000592705 DENND3A2RUS2 1198 aa13.74□□□□□ -0.21
DNMT1-228ENST00000592705 POLR2BP30876 1174 aaKnown RBP13.74□□□□□ -0.21
DNMT1-228ENST00000592705 TRIM28Q13263 835 aaKnown RBP13.74□□□□□ -0.21
DNMT1-228ENST00000592705 RSRC2Q7L4I2 434 aaKnown RBP13.74□□□□□ -0.21
DNMT1-228ENST00000592705 LINC00116Q8NCU8 138 aa13.74□□□□□ -0.21
DNMT1-228ENST00000592705 ZNF653Q96CK0 615 aa13.74□□□□□ -0.21
DNMT1-228ENST00000592705 CPSF2Q9P2I0 782 aaKnown RBP13.74□□□□□ -0.21
DNMT1-228ENST00000592705 XPAP23025 273 aaPredicted RBP13.74□□□□□ -0.21
DNMT1-228ENST00000592705 PPP1R2P3Q6NXS1 205 aa13.74□□□□□ -0.21
DNMT1-228ENST00000592705 ALKBH5Q6P6C2 394 aaKnown RBP13.74□□□□□ -0.21
DNMT1-228ENST00000592705 LRRC8CQ8TDW0 803 aa13.74□□□□□ -0.21
DNMT1-228ENST00000592705 NFU1Q9UMS0 254 aa13.74□□□□□ -0.21
DNMT1-228ENST00000592705 TADA3O75528 432 aa13.74□□□□□ -0.21
DNMT1-228ENST00000592705 PSAPP07602 524 aa13.74□□□□□ -0.21
DNMT1-228ENST00000592705 SARNPP82979 210 aaKnown RBP13.74□□□□□ -0.21
DNMT1-228ENST00000592705 ATP2C1P98194 919 aaPredicted RBP13.74□□□□□ -0.21
DNMT1-228ENST00000592705 CASC4Q6P4E1 433 aa13.74□□□□□ -0.21
DNMT1-228ENST00000592705 SMC1BQ8NDV3 1235 aa13.74□□□□□ -0.21
DNMT1-228ENST00000592705 POMGNT1Q8WZA1 660 aa13.74□□□□□ -0.21
DNMT1-228ENST00000592705 RILPQ96NA2 401 aa13.74□□□□□ -0.21
DNMT1-228ENST00000592705 MYCBPQ99417 103 aaPredicted RBP13.74□□□□□ -0.21
DNMT1-228ENST00000592705 RRAGCQ9HB90 399 aa13.74□□□□□ -0.21
DNMT1-228ENST00000592705 EIF3CLB5ME19 914 aaKnown RBP13.74□□□□□ -0.21
DNMT1-228ENST00000592705 GYS2P54840 703 aa13.74□□□□□ -0.21
DNMT1-228ENST00000592705 UBE2SQ16763 222 aa13.74□□□□□ -0.21
DNMT1-228ENST00000592705 TBC1D16Q8TBP0 767 aa13.74□□□□□ -0.21
DNMT1-228ENST00000592705 NEK9Q8TD19 979 aa13.74□□□□□ -0.21
DNMT1-228ENST00000592705 EIF3CQ99613 913 aaKnown RBP13.74□□□□□ -0.21
DNMT1-228ENST00000592705 PARVGQ9HBI0 331 aa13.74□□□□□ -0.21
DNMT1-228ENST00000592705 ADAMTS1Q9UHI8 967 aa13.74□□□□□ -0.21
DNMT1-228ENST00000592705 USP32Q8NFA0 1604 aa13.73□□□□□ -0.21
DNMT1-228ENST00000592705 FOXN1O15353 648 aa13.73□□□□□ -0.21
DNMT1-228ENST00000592705 CTNND1O60716 968 aaKnown RBP13.73□□□□□ -0.21
DNMT1-228ENST00000592705 SRGAP2O75044 1071 aa13.73□□□□□ -0.21
DNMT1-228ENST00000592705 MAPK4P31152 587 aa13.73□□□□□ -0.21
DNMT1-228ENST00000592705 STAT3P40763 770 aa13.73□□□□□ -0.21
DNMT1-228ENST00000592705 PHLDB3Q6NSJ2 640 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms