RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 BTG3Q14201 252 aaPredicted RBP24.79■■□□□ 1.56
DDX39A-215ENST00000590696 MTHFD1LQ6UB35 978 aa24.79■■□□□ 1.56
DDX39A-215ENST00000590696 NIPA1Q7RTP0 329 aa24.79■■□□□ 1.56
DDX39A-215ENST00000590696 RTN4RL1Q86UN2 441 aaPredicted RBP24.79■■□□□ 1.56
DDX39A-215ENST00000590696 FAM178BQ8IXR5 827 aa24.79■■□□□ 1.56
DDX39A-215ENST00000590696 NEK9Q8TD19 979 aa24.79■■□□□ 1.56
DDX39A-215ENST00000590696 CLP1Q92989 425 aaKnown RBP24.79■■□□□ 1.56
DDX39A-215ENST00000590696 C11orf84Q9BUA3 381 aaPredicted RBP24.79■■□□□ 1.56
DDX39A-215ENST00000590696 CELF4Q9BZC1 486 aaKnown RBP24.79■■□□□ 1.56
DDX39A-215ENST00000590696 IGKV6D-21A0A0A0MT36 114 aa24.78■■□□□ 1.56
DDX39A-215ENST00000590696 SMIM35A0A1B0GVV1 85 aa24.78■■□□□ 1.56
DDX39A-215ENST00000590696 H3BQ06 376 aaPredicted RBP24.78■■□□□ 1.56
DDX39A-215ENST00000590696 DGKIO75912 1065 aa24.78■■□□□ 1.56
DDX39A-215ENST00000590696 CCNE2O96020 404 aa24.78■■□□□ 1.56
DDX39A-215ENST00000590696 SLC26A2P50443 739 aa24.78■■□□□ 1.56
DDX39A-215ENST00000590696 METAP2P50579 478 aaKnown RBP eCLIP24.78■■□□□ 1.56
DDX39A-215ENST00000590696 APOBRQ0VD83 1088 aa24.78■■□□□ 1.56
DDX39A-215ENST00000590696 PFKFB3Q16875 520 aaPredicted RBP24.78■■□□□ 1.56
DDX39A-215ENST00000590696 ABHD15Q6UXT9 468 aa24.78■■□□□ 1.56
DDX39A-215ENST00000590696 EP400NLQ6ZTU2 488 aa24.78■■□□□ 1.56
DDX39A-215ENST00000590696 PLA2G4DQ86XP0 818 aa24.78■■□□□ 1.56
DDX39A-215ENST00000590696 PABPC5Q96DU9 382 aaKnown RBP24.78■■□□□ 1.56
DDX39A-215ENST00000590696 FTHL17Q9BXU8 183 aa24.78■■□□□ 1.56
DDX39A-215ENST00000590696 PADI3Q9ULW8 664 aa24.78■■□□□ 1.56
DDX39A-215ENST00000590696 TTC3P53804 2025 aa24.78■■□□□ 1.56
DDX39A-215ENST00000590696 GRXCR2A6NFK2 248 aa24.77■■□□□ 1.56
DDX39A-215ENST00000590696 FAM86B1E9PN63 330 aa24.77■■□□□ 1.56
DDX39A-215ENST00000590696 BACH1O14867 736 aa24.77■■□□□ 1.56
DDX39A-215ENST00000590696 GRM6O15303 877 aa24.77■■□□□ 1.56
DDX39A-215ENST00000590696 FAM86B2P0C5J1 330 aa24.77■■□□□ 1.56
DDX39A-215ENST00000590696 Q6ZUG5 572 aa24.77■■□□□ 1.56
DDX39A-215ENST00000590696 NME8Q8N427 588 aa24.77■■□□□ 1.56
DDX39A-215ENST00000590696 LRFN3Q9BTN0 628 aa24.77■■□□□ 1.56
DDX39A-215ENST00000590696 LMAN2LQ9H0V9 348 aa24.77■■□□□ 1.56
DDX39A-215ENST00000590696 IGSF9BQ9UPX0 1349 aa24.77■■□□□ 1.56
DDX39A-215ENST00000590696 CCDC196A0A1B0GTZ2 297 aa24.76■■□□□ 1.55
DDX39A-215ENST00000590696 HBP1O60381 514 aa24.76■■□□□ 1.55
DDX39A-215ENST00000590696 SCG2P13521 617 aa24.76■■□□□ 1.55
DDX39A-215ENST00000590696 KLRC1P26715 233 aa24.76■■□□□ 1.55
DDX39A-215ENST00000590696 PAK2Q13177 524 aa24.76■■□□□ 1.55
DDX39A-215ENST00000590696 PUS10Q3MIT2 529 aaKnown RBP24.76■■□□□ 1.55
DDX39A-215ENST00000590696 FAM160B1Q5W0V3 765 aa24.76■■□□□ 1.55
DDX39A-215ENST00000590696 UIMC1Q96RL1 719 aa24.76■■□□□ 1.55
DDX39A-215ENST00000590696 IGLV3-22A0A075B6J6 115 aa24.75■■□□□ 1.55
DDX39A-215ENST00000590696 ADAMTS3O15072 1205 aa24.75■■□□□ 1.55
DDX39A-215ENST00000590696 DHX15O43143 795 aaKnown RBP24.75■■□□□ 1.55
DDX39A-215ENST00000590696 CYP3A4P08684 503 aa24.75■■□□□ 1.55
DDX39A-215ENST00000590696 KRT76Q01546 638 aa24.75■■□□□ 1.55
DDX39A-215ENST00000590696 COL19A1Q14993 1142 aa24.75■■□□□ 1.55
DDX39A-215ENST00000590696 NPAS4Q8IUM7 802 aa24.75■■□□□ 1.55
DDX39A-215ENST00000590696 CCDC60Q8IWA6 550 aaPredicted RBP24.75■■□□□ 1.55
DDX39A-215ENST00000590696 GJD3Q8N144 294 aa24.75■■□□□ 1.55
DDX39A-215ENST00000590696 CRIPAKQ8N1N5 446 aa24.75■■□□□ 1.55
DDX39A-215ENST00000590696 CRYGNQ8WXF5 182 aa24.75■■□□□ 1.55
DDX39A-215ENST00000590696 KCNB2Q92953 911 aa24.75■■□□□ 1.55
DDX39A-215ENST00000590696 BRF1Q92994 677 aa24.75■■□□□ 1.55
DDX39A-215ENST00000590696 JAKMIP1Q96N16 626 aaKnown RBP24.75■■□□□ 1.55
DDX39A-215ENST00000590696 ZNF302Q9NR11 478 aa24.75■■□□□ 1.55
DDX39A-215ENST00000590696 CLDND1Q9NY35 253 aa24.75■■□□□ 1.55
DDX39A-215ENST00000590696 KDM3AQ9Y4C1 1321 aa24.75■■□□□ 1.55
DDX39A-215ENST00000590696 LOXHD1Q8IVV2 1947 aa24.74■■□□□ 1.55
DDX39A-215ENST00000590696 TMEM31Q5JXX7 168 aa24.74■■□□□ 1.55
DDX39A-215ENST00000590696 SWSAP1Q6NVH7 229 aa24.74■■□□□ 1.55
DDX39A-215ENST00000590696 MIS18BP1Q6P0N0 1132 aa24.74■■□□□ 1.55
DDX39A-215ENST00000590696 PDXDC2PQ6P474 469 aa24.74■■□□□ 1.55
DDX39A-215ENST00000590696 ATP8B4Q8TF62 1192 aa24.74■■□□□ 1.55
DDX39A-215ENST00000590696 ZMYND12Q9H0C1 365 aa24.74■■□□□ 1.55
DDX39A-215ENST00000590696 C6orf50Q9HD87 102 aa24.74■■□□□ 1.55
DDX39A-215ENST00000590696 MRPL42Q9Y6G3 142 aaKnown RBP24.74■■□□□ 1.55
DDX39A-215ENST00000590696 ESYT2A0FGR8 921 aa24.73■■□□□ 1.55
DDX39A-215ENST00000590696 PI4K2BG5E9Z4 385 aa24.73■■□□□ 1.55
DDX39A-215ENST00000590696 IPO5O00410 1097 aaKnown RBP24.73■■□□□ 1.55
DDX39A-215ENST00000590696 STAG3L1P0CL83 205 aa24.73■■□□□ 1.55
DDX39A-215ENST00000590696 SSTR3P32745 418 aaPredicted RBP24.73■■□□□ 1.55
DDX39A-215ENST00000590696 PKN1Q16512 942 aa24.73■■□□□ 1.55
DDX39A-215ENST00000590696 TMEM266Q2M3C6 531 aa24.73■■□□□ 1.55
DDX39A-215ENST00000590696 CMTR2Q8IYT2 770 aaKnown RBP24.73■■□□□ 1.55
DDX39A-215ENST00000590696 CCDC12Q8WUD4 166 aaPredicted RBP24.73■■□□□ 1.55
DDX39A-215ENST00000590696 ZNF577Q9BSK1 485 aa24.73■■□□□ 1.55
DDX39A-215ENST00000590696 PLVAPQ9BX97 442 aa24.73■■□□□ 1.55
DDX39A-215ENST00000590696 TMX1Q9H3N1 280 aa24.73■■□□□ 1.55
DDX39A-215ENST00000590696 ALG13Q9NP73 1137 aaKnown RBP24.73■■□□□ 1.55
DDX39A-215ENST00000590696 GINS2Q9Y248 185 aa24.73■■□□□ 1.55
DDX39A-215ENST00000590696 SNX14Q9Y5W7 946 aa24.73■■□□□ 1.55
DDX39A-215ENST00000590696 ATG2AQ2TAZ0 1938 aa24.73■■□□□ 1.55
DDX39A-215ENST00000590696 COL1A2P08123 1366 aa24.72■■□□□ 1.55
DDX39A-215ENST00000590696 PRPF3O43395 683 aaKnown RBP24.72■■□□□ 1.55
DDX39A-215ENST00000590696 NCK2O43639 380 aa24.72■■□□□ 1.55
DDX39A-215ENST00000590696 CSPG5O95196 566 aa24.72■■□□□ 1.55
DDX39A-215ENST00000590696 HSPA4P34932 840 aa24.72■■□□□ 1.55
DDX39A-215ENST00000590696 NFX1Q12986 1120 aaKnown RBP24.72■■□□□ 1.55
DDX39A-215ENST00000590696 PAN2Q504Q3 1202 aaKnown RBP24.72■■□□□ 1.55
DDX39A-215ENST00000590696 ZNF484Q5JVG2 852 aa24.72■■□□□ 1.55
DDX39A-215ENST00000590696 MCTP2Q6DN12 878 aa24.72■■□□□ 1.55
DDX39A-215ENST00000590696 BLOC1S2Q6QNY1 142 aa24.72■■□□□ 1.55
DDX39A-215ENST00000590696 KIAA0319LQ8IZA0 1049 aa24.72■■□□□ 1.55
DDX39A-215ENST00000590696 CDHR5Q9HBB8 845 aa24.72■■□□□ 1.55
DDX39A-215ENST00000590696 GPR37L1O60883 481 aa24.71■■□□□ 1.55
DDX39A-215ENST00000590696 MMP1P03956 469 aa24.71■■□□□ 1.55
DDX39A-215ENST00000590696 ATP4AP20648 1035 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms