RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 EPHX3Q9H6B9 360 aa20.42■□□□□ 0.86
PRKCSH-211ENST00000590098 RWDD3Q9Y3V2 267 aa20.42■□□□□ 0.86
PRKCSH-211ENST00000590098 ADGRA3Q8IWK6 1321 aa20.42■□□□□ 0.86
PRKCSH-211ENST00000590098 MYO7AQ13402 2215 aa20.41■□□□□ 0.86
PRKCSH-211ENST00000590098 RB1P06400 928 aa20.41■□□□□ 0.86
PRKCSH-211ENST00000590098 LEXMQ3ZCV2 418 aa20.41■□□□□ 0.86
PRKCSH-211ENST00000590098 NME8Q8N427 588 aa20.41■□□□□ 0.86
PRKCSH-211ENST00000590098 KHSRPQ92945 711 aaKnown RBP eCLIP20.41■□□□□ 0.86
PRKCSH-211ENST00000590098 KCNB2Q92953 911 aa20.41■□□□□ 0.86
PRKCSH-211ENST00000590098 AGO3Q9H9G7 860 aaKnown RBP20.41■□□□□ 0.86
PRKCSH-211ENST00000590098 C6orf50Q9HD87 102 aa20.41■□□□□ 0.86
PRKCSH-211ENST00000590098 CD320Q9NPF0 282 aa20.41■□□□□ 0.86
PRKCSH-211ENST00000590098 SMIM35A0A1B0GVV1 85 aa20.4■□□□□ 0.86
PRKCSH-211ENST00000590098 FAM86B1E9PN63 330 aa20.4■□□□□ 0.86
PRKCSH-211ENST00000590098 FAM86B2P0C5J1 330 aa20.4■□□□□ 0.86
PRKCSH-211ENST00000590098 HSPA4P34932 840 aa20.4■□□□□ 0.86
PRKCSH-211ENST00000590098 MYH9P35579 1960 aaKnown RBP20.4■□□□□ 0.86
PRKCSH-211ENST00000590098 BMPR1AP36894 532 aa20.4■□□□□ 0.86
PRKCSH-211ENST00000590098 AKAP17AQ02040 695 aaKnown RBP20.4■□□□□ 0.86
PRKCSH-211ENST00000590098 BTG3Q14201 252 aaPredicted RBP20.4■□□□□ 0.86
PRKCSH-211ENST00000590098 MTHFD1LQ6UB35 978 aa20.4■□□□□ 0.86
PRKCSH-211ENST00000590098 ABHD15Q6UXT9 468 aa20.4■□□□□ 0.86
PRKCSH-211ENST00000590098 C11orf84Q9BUA3 381 aaPredicted RBP20.4■□□□□ 0.86
PRKCSH-211ENST00000590098 CELF4Q9BZC1 486 aaKnown RBP20.4■□□□□ 0.86
PRKCSH-211ENST00000590098 ZMYND12Q9H0C1 365 aa20.4■□□□□ 0.86
PRKCSH-211ENST00000590098 SNX14Q9Y5W7 946 aa20.4■□□□□ 0.86
PRKCSH-211ENST00000590098 IGKV6D-21A0A0A0MT36 114 aa20.39■□□□□ 0.85
PRKCSH-211ENST00000590098 ESYT2A0FGR8 921 aa20.39■□□□□ 0.85
PRKCSH-211ENST00000590098 C5orf67F2Z3F1 127 aa20.39■□□□□ 0.85
PRKCSH-211ENST00000590098 IPO5O00410 1097 aaKnown RBP20.39■□□□□ 0.85
PRKCSH-211ENST00000590098 HBP1O60381 514 aa20.39■□□□□ 0.85
PRKCSH-211ENST00000590098 CCNE2O96020 404 aa20.39■□□□□ 0.85
PRKCSH-211ENST00000590098 CYP3A4P08684 503 aa20.39■□□□□ 0.85
PRKCSH-211ENST00000590098 KLRC1P26715 233 aa20.39■□□□□ 0.85
PRKCSH-211ENST00000590098 GNA11P29992 359 aa20.39■□□□□ 0.85
PRKCSH-211ENST00000590098 KRT76Q01546 638 aa20.39■□□□□ 0.85
PRKCSH-211ENST00000590098 PAK2Q13177 524 aa20.39■□□□□ 0.85
PRKCSH-211ENST00000590098 TCEAL5Q5H9L2 206 aa20.39■□□□□ 0.85
PRKCSH-211ENST00000590098 MIS18BP1Q6P0N0 1132 aa20.39■□□□□ 0.85
PRKCSH-211ENST00000590098 PDXDC2PQ6P474 469 aa20.39■□□□□ 0.85
PRKCSH-211ENST00000590098 REXO1Q8N1G1 1221 aaKnown RBP20.39■□□□□ 0.85
PRKCSH-211ENST00000590098 ZNF577Q9BSK1 485 aa20.39■□□□□ 0.85
PRKCSH-211ENST00000590098 NSUN3Q9H649 340 aaKnown RBP20.39■□□□□ 0.85
PRKCSH-211ENST00000590098 ZNF302Q9NR11 478 aa20.39■□□□□ 0.85
PRKCSH-211ENST00000590098 TCEAL9Q9UHQ7 104 aa20.39■□□□□ 0.85
PRKCSH-211ENST00000590098 PADI3Q9ULW8 664 aa20.39■□□□□ 0.85
PRKCSH-211ENST00000590098 EVPLQ92817 2033 aa20.39■□□□□ 0.85
PRKCSH-211ENST00000590098 IGSF9BQ9UPX0 1349 aa20.38■□□□□ 0.85
PRKCSH-211ENST00000590098 PRPF3O43395 683 aaKnown RBP20.38■□□□□ 0.85
PRKCSH-211ENST00000590098 DGKIO75912 1065 aa20.38■□□□□ 0.85
PRKCSH-211ENST00000590098 EP400NLQ6ZTU2 488 aa20.38■□□□□ 0.85
PRKCSH-211ENST00000590098 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.38■□□□□ 0.85
PRKCSH-211ENST00000590098 ATP8B4Q8TF62 1192 aa20.38■□□□□ 0.85
PRKCSH-211ENST00000590098 CLP1Q92989 425 aaKnown RBP20.38■□□□□ 0.85
PRKCSH-211ENST00000590098 ZNF689Q96CS4 500 aaPredicted RBP20.38■□□□□ 0.85
PRKCSH-211ENST00000590098 CCDC136Q96JN2 1154 aa20.38■□□□□ 0.85
PRKCSH-211ENST00000590098 LMAN2LQ9H0V9 348 aa20.38■□□□□ 0.85
PRKCSH-211ENST00000590098 RC3H2Q9HBD1 1191 aaKnown RBP20.38■□□□□ 0.85
PRKCSH-211ENST00000590098 TBC1D22BQ9NU19 505 aa20.38■□□□□ 0.85
PRKCSH-211ENST00000590098 COL1A2P08123 1366 aa20.37■□□□□ 0.85
PRKCSH-211ENST00000590098 KDM3AQ9Y4C1 1321 aa20.37■□□□□ 0.85
PRKCSH-211ENST00000590098 IGLV3-22A0A075B6J6 115 aa20.37■□□□□ 0.85
PRKCSH-211ENST00000590098 REC8O95072 547 aa20.37■□□□□ 0.85
PRKCSH-211ENST00000590098 LINC00271P0C7V0 271 aa20.37■□□□□ 0.85
PRKCSH-211ENST00000590098 STAG3L1P0CL83 205 aa20.37■□□□□ 0.85
PRKCSH-211ENST00000590098 RPS6KB1P23443 525 aa20.37■□□□□ 0.85
PRKCSH-211ENST00000590098 PSMA5P28066 241 aa20.37■□□□□ 0.85
PRKCSH-211ENST00000590098 SETQ01105 290 aaPredicted RBP20.37■□□□□ 0.85
PRKCSH-211ENST00000590098 PUS10Q3MIT2 529 aaKnown RBP20.37■□□□□ 0.85
PRKCSH-211ENST00000590098 ZNF484Q5JVG2 852 aa20.37■□□□□ 0.85
PRKCSH-211ENST00000590098 PTCRAQ6ISU1 281 aaPredicted RBP20.37■□□□□ 0.85
PRKCSH-211ENST00000590098 SWSAP1Q6NVH7 229 aa20.37■□□□□ 0.85
PRKCSH-211ENST00000590098 NPAS4Q8IUM7 802 aa20.37■□□□□ 0.85
PRKCSH-211ENST00000590098 CCDC60Q8IWA6 550 aaPredicted RBP20.37■□□□□ 0.85
PRKCSH-211ENST00000590098 CKAP2LQ8IYA6 745 aa20.37■□□□□ 0.85
PRKCSH-211ENST00000590098 FBXL16Q8N461 479 aa20.37■□□□□ 0.85
PRKCSH-211ENST00000590098 BICD2Q8TD16 824 aa20.37■□□□□ 0.85
PRKCSH-211ENST00000590098 LINC01599Q8WXQ3 324 aa20.37■□□□□ 0.85
PRKCSH-211ENST00000590098 PHKBQ93100 1093 aa20.37■□□□□ 0.85
PRKCSH-211ENST00000590098 UIMC1Q96RL1 719 aa20.37■□□□□ 0.85
PRKCSH-211ENST00000590098 GINS2Q9Y248 185 aa20.37■□□□□ 0.85
PRKCSH-211ENST00000590098 NID2Q14112 1375 aa20.36■□□□□ 0.85
PRKCSH-211ENST00000590098 DHX15O43143 795 aaKnown RBP20.36■□□□□ 0.85
PRKCSH-211ENST00000590098 NCK2O43639 380 aa20.36■□□□□ 0.85
PRKCSH-211ENST00000590098 PKN1Q16512 942 aa20.36■□□□□ 0.85
PRKCSH-211ENST00000590098 ZNF746Q6NUN9 644 aaPredicted RBP20.36■□□□□ 0.85
PRKCSH-211ENST00000590098 RTN4RL1Q86UN2 441 aaPredicted RBP20.36■□□□□ 0.85
PRKCSH-211ENST00000590098 CRYGNQ8WXF5 182 aa20.36■□□□□ 0.85
PRKCSH-211ENST00000590098 PABPC5Q96DU9 382 aaKnown RBP20.36■□□□□ 0.85
PRKCSH-211ENST00000590098 PLVAPQ9BX97 442 aa20.36■□□□□ 0.85
PRKCSH-211ENST00000590098 H3BQ06 376 aaPredicted RBP20.35■□□□□ 0.85
PRKCSH-211ENST00000590098 ADAMTS3O15072 1205 aa20.35■□□□□ 0.85
PRKCSH-211ENST00000590098 GRM6O15303 877 aa20.35■□□□□ 0.85
PRKCSH-211ENST00000590098 NFX1Q12986 1120 aaKnown RBP20.35■□□□□ 0.85
PRKCSH-211ENST00000590098 PRR16Q569H4 304 aa20.35■□□□□ 0.85
PRKCSH-211ENST00000590098 FAM43BQ6ZT52 329 aaPredicted RBP20.35■□□□□ 0.85
PRKCSH-211ENST00000590098 CMTR2Q8IYT2 770 aaKnown RBP20.35■□□□□ 0.85
PRKCSH-211ENST00000590098 CCDC148Q8NFR7 591 aa20.35■□□□□ 0.85
PRKCSH-211ENST00000590098 NEK9Q8TD19 979 aa20.35■□□□□ 0.85
PRKCSH-211ENST00000590098 SLC26A6Q9BXS9 759 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms