RNA–Protein interactions for RNA: ENST00000588323.1

VPS4B-203, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 3

Gene VPS4B, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-203ENST00000588323 SLC30A1Q9Y6M5 507 aa5.18□□□□□ -1.58
VPS4B-203ENST00000588323 MAN2B1O00754 1011 aa5.17□□□□□ -1.58
VPS4B-203ENST00000588323 ARHGAP6O43182 974 aa5.17□□□□□ -1.58
VPS4B-203ENST00000588323 KRT15P19012 456 aa5.17□□□□□ -1.58
VPS4B-203ENST00000588323 RPS19P39019 145 aaKnown RBP5.17□□□□□ -1.58
VPS4B-203ENST00000588323 ADCY8P40145 1251 aa5.17□□□□□ -1.58
VPS4B-203ENST00000588323 KCNQ1P51787 676 aa5.17□□□□□ -1.58
VPS4B-203ENST00000588323 ST5P78524 1137 aa5.17□□□□□ -1.58
VPS4B-203ENST00000588323 FIGNQ5HY92 759 aa5.17□□□□□ -1.58
VPS4B-203ENST00000588323 CXXC5Q7LFL8 322 aaKnown RBP5.17□□□□□ -1.58
VPS4B-203ENST00000588323 OSTM1Q86WC4 334 aa5.17□□□□□ -1.58
VPS4B-203ENST00000588323 PTRH1Q86Y79 214 aaKnown RBP5.17□□□□□ -1.58
VPS4B-203ENST00000588323 SCUBE1Q8IWY4 988 aa5.17□□□□□ -1.58
VPS4B-203ENST00000588323 WDR48Q8TAF3 677 aa5.17□□□□□ -1.58
VPS4B-203ENST00000588323 IPO9Q96P70 1041 aaKnown RBP5.17□□□□□ -1.58
VPS4B-203ENST00000588323 PLA2G12BQ9BX93 195 aa5.17□□□□□ -1.58
VPS4B-203ENST00000588323 ZDHHC5Q9C0B5 715 aa5.17□□□□□ -1.58
VPS4B-203ENST00000588323 GALNT8Q9NY28 637 aa5.17□□□□□ -1.58
VPS4B-203ENST00000588323 PUF60Q9UHX1 559 aaKnown RBP5.17□□□□□ -1.58
VPS4B-203ENST00000588323 PCDHA8Q9Y5H6 950 aa5.17□□□□□ -1.58
VPS4B-203ENST00000588323 PRAMEF25A6NGN4 478 aa5.16□□□□□ -1.58
VPS4B-203ENST00000588323 WNT9AO14904 365 aa5.16□□□□□ -1.58
VPS4B-203ENST00000588323 PYGMP11217 842 aa5.16□□□□□ -1.58
VPS4B-203ENST00000588323 PDE6AP16499 860 aa5.16□□□□□ -1.58
VPS4B-203ENST00000588323 NAT1P18440 290 aa5.16□□□□□ -1.58
VPS4B-203ENST00000588323 MCM7P33993 719 aa5.16□□□□□ -1.58
VPS4B-203ENST00000588323 SUMO1P63165 101 aaKnown RBP5.16□□□□□ -1.58
VPS4B-203ENST00000588323 IL13RA1P78552 427 aa5.16□□□□□ -1.58
VPS4B-203ENST00000588323 GUCY1A3Q02108 690 aa5.16□□□□□ -1.58
VPS4B-203ENST00000588323 NFYCQ13952 458 aa5.16□□□□□ -1.58
VPS4B-203ENST00000588323 CRY1Q16526 586 aa5.16□□□□□ -1.58
VPS4B-203ENST00000588323 LSM12Q3MHD2 195 aaKnown RBP5.16□□□□□ -1.58
VPS4B-203ENST00000588323 Q6ZSN1 163 aa5.16□□□□□ -1.58
VPS4B-203ENST00000588323 C16orf59Q7L2K0 433 aa5.16□□□□□ -1.58
VPS4B-203ENST00000588323 C1orf210Q8IVY1 113 aa5.16□□□□□ -1.58
VPS4B-203ENST00000588323 PCDH19Q8TAB3 1148 aa5.16□□□□□ -1.58
VPS4B-203ENST00000588323 KIAA1683Q9H0B3 1180 aa5.16□□□□□ -1.58
VPS4B-203ENST00000588323 TRBV23-1A0A0A0MS06 115 aa5.15□□□□□ -1.59
VPS4B-203ENST00000588323 MATN2O00339 956 aa5.15□□□□□ -1.59
VPS4B-203ENST00000588323 U2SURPO15042 1029 aaKnown RBP5.15□□□□□ -1.59
VPS4B-203ENST00000588323 GSTA4O15217 222 aa5.15□□□□□ -1.59
VPS4B-203ENST00000588323 AMY2AP04746 511 aa5.15□□□□□ -1.59
VPS4B-203ENST00000588323 SRGAP2CP0DJJ0 459 aa5.15□□□□□ -1.59
VPS4B-203ENST00000588323 AMY2BP19961 511 aa5.15□□□□□ -1.59
VPS4B-203ENST00000588323 MEOX1P50221 254 aa5.15□□□□□ -1.59
VPS4B-203ENST00000588323 DGCR2P98153 550 aa5.15□□□□□ -1.59
VPS4B-203ENST00000588323 FAM47CQ5HY64 1035 aa5.15□□□□□ -1.59
VPS4B-203ENST00000588323 MAMDC4Q6UXC1 1216 aa5.15□□□□□ -1.59
VPS4B-203ENST00000588323 USP30Q70CQ3 517 aa5.15□□□□□ -1.59
VPS4B-203ENST00000588323 SPATC1Q76KD6 591 aa5.15□□□□□ -1.59
VPS4B-203ENST00000588323 OTOP2Q7RTS6 562 aa5.15□□□□□ -1.59
VPS4B-203ENST00000588323 NPM2Q86SE8 214 aaKnown RBP5.15□□□□□ -1.59
VPS4B-203ENST00000588323 WNK4Q96J92 1243 aa5.15□□□□□ -1.59
VPS4B-203ENST00000588323 MSL2Q9HCI7 577 aa5.15□□□□□ -1.59
VPS4B-203ENST00000588323 CBLCQ9ULV8 474 aa5.15□□□□□ -1.59
VPS4B-203ENST00000588323 ADCY3O60266 1144 aa5.14□□□□□ -1.59
VPS4B-203ENST00000588323 C4BPAP04003 597 aaKnown RBP5.14□□□□□ -1.59
VPS4B-203ENST00000588323 ACRV1P26436 265 aa5.14□□□□□ -1.59
VPS4B-203ENST00000588323 AOAHP28039 575 aa5.14□□□□□ -1.59
VPS4B-203ENST00000588323 MC4RP32245 332 aa5.14□□□□□ -1.59
VPS4B-203ENST00000588323 JAM2P57087 298 aa5.14□□□□□ -1.59
VPS4B-203ENST00000588323 HERVK_113P62684 666 aa5.14□□□□□ -1.59
VPS4B-203ENST00000588323 EIF4HQ15056 248 aaKnown RBP5.14□□□□□ -1.59
VPS4B-203ENST00000588323 STILQ15468 1287 aa5.14□□□□□ -1.59
VPS4B-203ENST00000588323 TBR1Q16650 682 aa5.14□□□□□ -1.59
VPS4B-203ENST00000588323 IGFL4Q6B9Z1 124 aa5.14□□□□□ -1.59
VPS4B-203ENST00000588323 LARP4Q71RC2 724 aaKnown RBP eCLIP5.14□□□□□ -1.59
VPS4B-203ENST00000588323 FILIP1Q7Z7B0 1213 aa5.14□□□□□ -1.59
VPS4B-203ENST00000588323 ZNF808Q8N4W9 903 aaPredicted RBP5.14□□□□□ -1.59
VPS4B-203ENST00000588323 PLEKHG4BQ96PX9 1271 aa5.14□□□□□ -1.59
VPS4B-203ENST00000588323 BTBD2Q9BX70 525 aa5.14□□□□□ -1.59
VPS4B-203ENST00000588323 BTBD7Q9P203 1132 aa5.14□□□□□ -1.59
VPS4B-203ENST00000588323 PFDN2Q9UHV9 154 aa5.14□□□□□ -1.59
VPS4B-203ENST00000588323 CDC42EP3Q9UKI2 254 aa5.14□□□□□ -1.59
VPS4B-203ENST00000588323 WDR33Q9C0J8 1336 aaKnown RBP5.14□□□□□ -1.59
VPS4B-203ENST00000588323 ARVCFO00192 962 aa5.13□□□□□ -1.59
VPS4B-203ENST00000588323 KCNK3O14649 394 aa5.13□□□□□ -1.59
VPS4B-203ENST00000588323 PLSCR1O15162 318 aa5.13□□□□□ -1.59
VPS4B-203ENST00000588323 PDPK1O15530 556 aa5.13□□□□□ -1.59
VPS4B-203ENST00000588323 NARSO43776 548 aaKnown RBP5.13□□□□□ -1.59
VPS4B-203ENST00000588323 CLASP2O75122 1294 aaKnown RBP5.13□□□□□ -1.59
VPS4B-203ENST00000588323 STK10O94804 968 aaKnown RBP5.13□□□□□ -1.59
VPS4B-203ENST00000588323 MSX2P35548 267 aaPredicted RBP5.13□□□□□ -1.59
VPS4B-203ENST00000588323 ECE1P42892 770 aa5.13□□□□□ -1.59
VPS4B-203ENST00000588323 DNM2P50570 870 aa5.13□□□□□ -1.59
VPS4B-203ENST00000588323 HHEXQ03014 270 aa5.13□□□□□ -1.59
VPS4B-203ENST00000588323 SSRP1Q08945 709 aaKnown RBP5.13□□□□□ -1.59
VPS4B-203ENST00000588323 DUSP8Q13202 625 aa5.13□□□□□ -1.59
VPS4B-203ENST00000588323 PCOLCEQ15113 449 aa5.13□□□□□ -1.59
VPS4B-203ENST00000588323 MTERF2Q49AM1 385 aa5.13□□□□□ -1.59
VPS4B-203ENST00000588323 FAM209AQ5JX71 171 aa5.13□□□□□ -1.59
VPS4B-203ENST00000588323 ZC3H7AQ8IWR0 971 aaKnown RBP5.13□□□□□ -1.59
VPS4B-203ENST00000588323 CKAP2LQ8IYA6 745 aa5.13□□□□□ -1.59
VPS4B-203ENST00000588323 RTKN2Q8IZC4 609 aa5.13□□□□□ -1.59
VPS4B-203ENST00000588323 CHFRQ96EP1 664 aa5.13□□□□□ -1.59
VPS4B-203ENST00000588323 TRIM8Q9BZR9 551 aa5.13□□□□□ -1.59
VPS4B-203ENST00000588323 OR10A2Q9H208 303 aa5.13□□□□□ -1.59
VPS4B-203ENST00000588323 UCKL1Q9NWZ5 548 aa5.13□□□□□ -1.59
VPS4B-203ENST00000588323 PLA2G3Q9NZ20 509 aa5.13□□□□□ -1.59
VPS4B-203ENST00000588323 PCDHA9Q9Y5H5 950 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms