RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 TMEM260Q9NX78 707 aa18.15■□□□□ 0.5
ERCC1-206ENST00000588300 NAP1L2Q9ULW6 460 aaPredicted RBP18.15■□□□□ 0.5
ERCC1-206ENST00000588300 SMIM35A0A1B0GVV1 85 aa18.14■□□□□ 0.49
ERCC1-206ENST00000588300 POTEB3A0JP26 581 aa18.14■□□□□ 0.49
ERCC1-206ENST00000588300 ATG7O95352 703 aa18.14■□□□□ 0.49
ERCC1-206ENST00000588300 LINC00271P0C7V0 271 aa18.14■□□□□ 0.49
ERCC1-206ENST00000588300 IL9P15248 144 aa18.14■□□□□ 0.49
ERCC1-206ENST00000588300 CDC27P30260 824 aa18.14■□□□□ 0.49
ERCC1-206ENST00000588300 TMEM62Q0P6H9 643 aa18.14■□□□□ 0.49
ERCC1-206ENST00000588300 POTEBQ6S5H4 581 aa18.14■□□□□ 0.49
ERCC1-206ENST00000588300 LINC01599Q8WXQ3 324 aa18.14■□□□□ 0.49
ERCC1-206ENST00000588300 CLP1Q92989 425 aaKnown RBP18.14■□□□□ 0.49
ERCC1-206ENST00000588300 FAM217BQ9NTX9 383 aaPredicted RBP18.14■□□□□ 0.49
ERCC1-206ENST00000588300 IGSF9BQ9UPX0 1349 aa18.14■□□□□ 0.49
ERCC1-206ENST00000588300 CCDC196A0A1B0GTZ2 297 aa18.13■□□□□ 0.49
ERCC1-206ENST00000588300 GRXCR2A6NFK2 248 aa18.13■□□□□ 0.49
ERCC1-206ENST00000588300 H3BQ06 376 aaPredicted RBP18.13■□□□□ 0.49
ERCC1-206ENST00000588300 DDX39AO00148 427 aaKnown RBP18.13■□□□□ 0.49
ERCC1-206ENST00000588300 BACH1O14867 736 aa18.13■□□□□ 0.49
ERCC1-206ENST00000588300 DGKIO75912 1065 aa18.13■□□□□ 0.49
ERCC1-206ENST00000588300 METAP2P50579 478 aaKnown RBP eCLIP18.13■□□□□ 0.49
ERCC1-206ENST00000588300 PAK2Q13177 524 aa18.13■□□□□ 0.49
ERCC1-206ENST00000588300 PFKFB3Q16875 520 aaPredicted RBP18.13■□□□□ 0.49
ERCC1-206ENST00000588300 TMEM31Q5JXX7 168 aa18.13■□□□□ 0.49
ERCC1-206ENST00000588300 FAM160B1Q5W0V3 765 aa18.13■□□□□ 0.49
ERCC1-206ENST00000588300 EP400NLQ6ZTU2 488 aa18.13■□□□□ 0.49
ERCC1-206ENST00000588300 PLA2G4DQ86XP0 818 aa18.13■□□□□ 0.49
ERCC1-206ENST00000588300 NME8Q8N427 588 aa18.13■□□□□ 0.49
ERCC1-206ENST00000588300 KHSRPQ92945 711 aaKnown RBP eCLIP18.13■□□□□ 0.49
ERCC1-206ENST00000588300 LRFN3Q9BTN0 628 aa18.13■□□□□ 0.49
ERCC1-206ENST00000588300 CELF4Q9BZC1 486 aaKnown RBP18.13■□□□□ 0.49
ERCC1-206ENST00000588300 CD320Q9NPF0 282 aa18.13■□□□□ 0.49
ERCC1-206ENST00000588300 PADI3Q9ULW8 664 aa18.13■□□□□ 0.49
ERCC1-206ENST00000588300 KIAA1671Q9BY89 1806 aa18.13■□□□□ 0.49
ERCC1-206ENST00000588300 KDM3AQ9Y4C1 1321 aa18.13■□□□□ 0.49
ERCC1-206ENST00000588300 IGKV6D-21A0A0A0MT36 114 aa18.12■□□□□ 0.49
ERCC1-206ENST00000588300 GRM6O15303 877 aa18.12■□□□□ 0.49
ERCC1-206ENST00000588300 NCK2O43639 380 aa18.12■□□□□ 0.49
ERCC1-206ENST00000588300 HBP1O60381 514 aa18.12■□□□□ 0.49
ERCC1-206ENST00000588300 CCNE2O96020 404 aa18.12■□□□□ 0.49
ERCC1-206ENST00000588300 SCG2P13521 617 aa18.12■□□□□ 0.49
ERCC1-206ENST00000588300 COL19A1Q14993 1142 aa18.12■□□□□ 0.49
ERCC1-206ENST00000588300 JAKMIP3Q5VZ66 844 aa18.12■□□□□ 0.49
ERCC1-206ENST00000588300 MTHFD1LQ6UB35 978 aa18.12■□□□□ 0.49
ERCC1-206ENST00000588300 ABHD15Q6UXT9 468 aa18.12■□□□□ 0.49
ERCC1-206ENST00000588300 NPAS4Q8IUM7 802 aa18.12■□□□□ 0.49
ERCC1-206ENST00000588300 GJD3Q8N144 294 aa18.12■□□□□ 0.49
ERCC1-206ENST00000588300 CCDC12Q8WUD4 166 aaPredicted RBP18.12■□□□□ 0.49
ERCC1-206ENST00000588300 PLVAPQ9BX97 442 aa18.12■□□□□ 0.49
ERCC1-206ENST00000588300 CLDND1Q9NY35 253 aa18.12■□□□□ 0.49
ERCC1-206ENST00000588300 FAM50BQ9Y247 325 aa18.12■□□□□ 0.49
ERCC1-206ENST00000588300 ESYT2A0FGR8 921 aa18.11■□□□□ 0.49
ERCC1-206ENST00000588300 FAM86B1E9PN63 330 aa18.11■□□□□ 0.49
ERCC1-206ENST00000588300 CYP3A4P08684 503 aa18.11■□□□□ 0.49
ERCC1-206ENST00000588300 FAM86B2P0C5J1 330 aa18.11■□□□□ 0.49
ERCC1-206ENST00000588300 STAG3L1P0CL83 205 aa18.11■□□□□ 0.49
ERCC1-206ENST00000588300 SSTR3P32745 418 aaPredicted RBP18.11■□□□□ 0.49
ERCC1-206ENST00000588300 ADD1P35611 737 aaKnown RBP18.11■□□□□ 0.49
ERCC1-206ENST00000588300 KRT76Q01546 638 aa18.11■□□□□ 0.49
ERCC1-206ENST00000588300 MCTP2Q6DN12 878 aa18.11■□□□□ 0.49
ERCC1-206ENST00000588300 MIS18BP1Q6P0N0 1132 aa18.11■□□□□ 0.49
ERCC1-206ENST00000588300 RTN4RL1Q86UN2 441 aaPredicted RBP18.11■□□□□ 0.49
ERCC1-206ENST00000588300 CMTR2Q8IYT2 770 aaKnown RBP18.11■□□□□ 0.49
ERCC1-206ENST00000588300 ATP8B4Q8TF62 1192 aa18.11■□□□□ 0.49
ERCC1-206ENST00000588300 C6orf50Q9HD87 102 aa18.11■□□□□ 0.49
ERCC1-206ENST00000588300 ZNF302Q9NR11 478 aa18.11■□□□□ 0.49
ERCC1-206ENST00000588300 COL1A2P08123 1366 aa18.11■□□□□ 0.49
ERCC1-206ENST00000588300 PI4K2BG5E9Z4 385 aa18.1■□□□□ 0.49
ERCC1-206ENST00000588300 IPO5O00410 1097 aaKnown RBP18.1■□□□□ 0.49
ERCC1-206ENST00000588300 GPR37L1O60883 481 aa18.1■□□□□ 0.49
ERCC1-206ENST00000588300 MMP1P03956 469 aa18.1■□□□□ 0.49
ERCC1-206ENST00000588300 KLRC1P26715 233 aa18.1■□□□□ 0.49
ERCC1-206ENST00000588300 SETQ01105 290 aaPredicted RBP18.1■□□□□ 0.49
ERCC1-206ENST00000588300 APOBRQ0VD83 1088 aa18.1■□□□□ 0.49
ERCC1-206ENST00000588300 PDXDC2PQ6P474 469 aa18.1■□□□□ 0.49
ERCC1-206ENST00000588300 FAM43BQ6ZT52 329 aaPredicted RBP18.1■□□□□ 0.49
ERCC1-206ENST00000588300 Q6ZUG5 572 aa18.1■□□□□ 0.49
ERCC1-206ENST00000588300 CCDC60Q8IWA6 550 aaPredicted RBP18.1■□□□□ 0.49
ERCC1-206ENST00000588300 CRIPAKQ8N1N5 446 aa18.1■□□□□ 0.49
ERCC1-206ENST00000588300 CRYGNQ8WXF5 182 aa18.1■□□□□ 0.49
ERCC1-206ENST00000588300 P2RX5Q93086 422 aa18.1■□□□□ 0.49
ERCC1-206ENST00000588300 ZMYND12Q9H0C1 365 aa18.1■□□□□ 0.49
ERCC1-206ENST00000588300 MRPL42Q9Y6G3 142 aaKnown RBP18.1■□□□□ 0.49
ERCC1-206ENST00000588300 MYH9P35579 1960 aaKnown RBP18.1■□□□□ 0.49
ERCC1-206ENST00000588300 NID2Q14112 1375 aa18.09■□□□□ 0.49
ERCC1-206ENST00000588300 MYO7AQ13402 2215 aa18.09■□□□□ 0.49
ERCC1-206ENST00000588300 IGLV3-22A0A075B6J6 115 aa18.09■□□□□ 0.49
ERCC1-206ENST00000588300 DHX15O43143 795 aaKnown RBP18.09■□□□□ 0.49
ERCC1-206ENST00000588300 CPA1P15085 419 aa18.09■□□□□ 0.49
ERCC1-206ENST00000588300 NAALADL2Q58DX5 795 aa18.09■□□□□ 0.49
ERCC1-206ENST00000588300 ZNF484Q5JVG2 852 aa18.09■□□□□ 0.49
ERCC1-206ENST00000588300 BLOC1S2Q6QNY1 142 aa18.09■□□□□ 0.49
ERCC1-206ENST00000588300 REXO1Q8N1G1 1221 aaKnown RBP18.09■□□□□ 0.49
ERCC1-206ENST00000588300 KCNB2Q92953 911 aa18.09■□□□□ 0.49
ERCC1-206ENST00000588300 BRF1Q92994 677 aa18.09■□□□□ 0.49
ERCC1-206ENST00000588300 JAKMIP1Q96N16 626 aaKnown RBP18.09■□□□□ 0.49
ERCC1-206ENST00000588300 ZNF577Q9BSK1 485 aa18.09■□□□□ 0.49
ERCC1-206ENST00000588300 TBC1D22BQ9NU19 505 aa18.09■□□□□ 0.49
ERCC1-206ENST00000588300 TCEAL9Q9UHQ7 104 aa18.09■□□□□ 0.49
ERCC1-206ENST00000588300 LRFN2Q9ULH4 789 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms