RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 PRCPP42785 496 aa11.67□□□□□ -0.54
CHMP1B-202ENST00000588284 ACTR2P61160 394 aa11.67□□□□□ -0.54
CHMP1B-202ENST00000588284 PAK1Q13153 545 aa11.67□□□□□ -0.54
CHMP1B-202ENST00000588284 GIT2Q14161 759 aa11.67□□□□□ -0.54
CHMP1B-202ENST00000588284 GRB14Q14449 540 aa11.67□□□□□ -0.54
CHMP1B-202ENST00000588284 TTLL4Q14679 1199 aa11.67□□□□□ -0.54
CHMP1B-202ENST00000588284 NCAPHQ15003 741 aa11.67□□□□□ -0.54
CHMP1B-202ENST00000588284 TPD52L1Q16890 204 aaPredicted RBP11.67□□□□□ -0.54
CHMP1B-202ENST00000588284 ARSHQ5FYA8 562 aa11.67□□□□□ -0.54
CHMP1B-202ENST00000588284 HERC4Q5GLZ8 1057 aaPredicted RBP11.67□□□□□ -0.54
CHMP1B-202ENST00000588284 RINT1Q6NUQ1 792 aa11.67□□□□□ -0.54
CHMP1B-202ENST00000588284 MAMDC4Q6UXC1 1216 aa11.67□□□□□ -0.54
CHMP1B-202ENST00000588284 ABHD15Q6UXT9 468 aa11.67□□□□□ -0.54
CHMP1B-202ENST00000588284 BANK1Q8NDB2 785 aa11.67□□□□□ -0.54
CHMP1B-202ENST00000588284 PIGOQ8TEQ8 1089 aa11.67□□□□□ -0.54
CHMP1B-202ENST00000588284 SCFD2Q8WU76 684 aa11.67□□□□□ -0.54
CHMP1B-202ENST00000588284 SEPT1Q8WYJ6 367 aa11.67□□□□□ -0.54
CHMP1B-202ENST00000588284 FGD4Q96M96 766 aa11.67□□□□□ -0.54
CHMP1B-202ENST00000588284 CCDC43Q96MW1 224 aaKnown RBP11.67□□□□□ -0.54
CHMP1B-202ENST00000588284 TRIM5Q9C035 493 aa11.67□□□□□ -0.54
CHMP1B-202ENST00000588284 R3HDMLQ9H3Y0 253 aa11.67□□□□□ -0.54
CHMP1B-202ENST00000588284 MLXIPQ9HAP2 919 aa11.67□□□□□ -0.54
CHMP1B-202ENST00000588284 VTA1Q9NP79 307 aa11.67□□□□□ -0.54
CHMP1B-202ENST00000588284 DDX41Q9UJV9 622 aaKnown RBP11.67□□□□□ -0.54
CHMP1B-202ENST00000588284 ADGRA2Q96PE1 1338 aa11.66□□□□□ -0.54
CHMP1B-202ENST00000588284 FRMD3A2A2Y4 597 aa11.66□□□□□ -0.54
CHMP1B-202ENST00000588284 CBFA2T2O43439 604 aa11.66□□□□□ -0.54
CHMP1B-202ENST00000588284 TBCAO75347 108 aaKnown RBP11.66□□□□□ -0.54
CHMP1B-202ENST00000588284 FGFR1OPO95684 399 aaKnown RBP11.66□□□□□ -0.54
CHMP1B-202ENST00000588284 SUPT20HL2P0C7V6 817 aa11.66□□□□□ -0.54
CHMP1B-202ENST00000588284 CCNE1P24864 410 aa11.66□□□□□ -0.54
CHMP1B-202ENST00000588284 GUCY2CP25092 1073 aa11.66□□□□□ -0.54
CHMP1B-202ENST00000588284 SP2Q02086 613 aa11.66□□□□□ -0.54
CHMP1B-202ENST00000588284 IRF5Q13568 498 aa11.66□□□□□ -0.54
CHMP1B-202ENST00000588284 FAM26FQ5R3K3 315 aa11.66□□□□□ -0.54
CHMP1B-202ENST00000588284 FAM160B1Q5W0V3 765 aa11.66□□□□□ -0.54
CHMP1B-202ENST00000588284 KLHL10Q6JEL2 608 aa11.66□□□□□ -0.54
CHMP1B-202ENST00000588284 SWSAP1Q6NVH7 229 aa11.66□□□□□ -0.54
CHMP1B-202ENST00000588284 FOXR2Q6PJQ5 311 aa11.66□□□□□ -0.54
CHMP1B-202ENST00000588284 METTL7BQ6UX53 244 aa11.66□□□□□ -0.54
CHMP1B-202ENST00000588284 C1orf186Q6ZWK4 172 aa11.66□□□□□ -0.54
CHMP1B-202ENST00000588284 ARMCX2Q7L311 632 aa11.66□□□□□ -0.54
CHMP1B-202ENST00000588284 CYFIP1Q7L576 1253 aa11.66□□□□□ -0.54
CHMP1B-202ENST00000588284 DHX37Q8IY37 1157 aaKnown RBP11.66□□□□□ -0.54
CHMP1B-202ENST00000588284 GUF1Q8N442 669 aaKnown RBP11.66□□□□□ -0.54
CHMP1B-202ENST00000588284 NOC3LQ8WTT2 800 aaKnown RBP11.66□□□□□ -0.54
CHMP1B-202ENST00000588284 NELFBQ8WX92 580 aa11.66□□□□□ -0.54
CHMP1B-202ENST00000588284 NRBP2Q9NSY0 501 aa11.66□□□□□ -0.54
CHMP1B-202ENST00000588284 FANCLQ9NW38 375 aa11.66□□□□□ -0.54
CHMP1B-202ENST00000588284 GABBR1Q9UBS5 961 aa11.66□□□□□ -0.54
CHMP1B-202ENST00000588284 SEL1LQ9UBV2 794 aa11.66□□□□□ -0.54
CHMP1B-202ENST00000588284 KCNG1Q9UIX4 513 aa11.66□□□□□ -0.54
CHMP1B-202ENST00000588284 ODF2LQ9ULJ1 636 aa11.66□□□□□ -0.54
CHMP1B-202ENST00000588284 GDAQ9Y2T3 454 aa11.66□□□□□ -0.54
CHMP1B-202ENST00000588284 RBM47A0AV96 593 aaKnown RBP11.65□□□□□ -0.54
CHMP1B-202ENST00000588284 BACH1O14867 736 aa11.65□□□□□ -0.54
CHMP1B-202ENST00000588284 FAM13AO94988 1023 aa11.65□□□□□ -0.54
CHMP1B-202ENST00000588284 GGPS1O95749 300 aa11.65□□□□□ -0.54
CHMP1B-202ENST00000588284 TXNP10599 105 aaKnown RBP11.65□□□□□ -0.54
CHMP1B-202ENST00000588284 UBA1P22314 1058 aaKnown RBP11.65□□□□□ -0.54
CHMP1B-202ENST00000588284 YWHABP31946 246 aaKnown RBP11.65□□□□□ -0.54
CHMP1B-202ENST00000588284 SPAG1Q07617 926 aa11.65□□□□□ -0.54
CHMP1B-202ENST00000588284 EHHADHQ08426 723 aa11.65□□□□□ -0.54
CHMP1B-202ENST00000588284 STK4Q13043 487 aa11.65□□□□□ -0.54
CHMP1B-202ENST00000588284 COASYQ13057 564 aa11.65□□□□□ -0.54
CHMP1B-202ENST00000588284 MAP2K5Q13163 448 aa11.65□□□□□ -0.54
CHMP1B-202ENST00000588284 LAMC2Q13753 1193 aa11.65□□□□□ -0.54
CHMP1B-202ENST00000588284 XKR3Q5GH77 459 aa11.65□□□□□ -0.54
CHMP1B-202ENST00000588284 CELF3Q5SZQ8 465 aaKnown RBP11.65□□□□□ -0.54
CHMP1B-202ENST00000588284 COL13A1Q5TAT6 717 aaPredicted RBP11.65□□□□□ -0.54
CHMP1B-202ENST00000588284 IQSEC1Q6DN90 963 aa11.65□□□□□ -0.54
CHMP1B-202ENST00000588284 PADI6Q6TGC4 694 aa11.65□□□□□ -0.54
CHMP1B-202ENST00000588284 STXBP4Q6ZWJ1 553 aa11.65□□□□□ -0.54
CHMP1B-202ENST00000588284 EEPD1Q7L9B9 569 aa11.65□□□□□ -0.54
CHMP1B-202ENST00000588284 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.65□□□□□ -0.54
CHMP1B-202ENST00000588284 MYOCDQ8IZQ8 938 aa11.65□□□□□ -0.54
CHMP1B-202ENST00000588284 ANKRD20A12PQ8NF67 263 aa11.65□□□□□ -0.54
CHMP1B-202ENST00000588284 PDLIM2Q96JY6 352 aa11.65□□□□□ -0.54
CHMP1B-202ENST00000588284 ABHD16BQ9H3Z7 469 aa11.65□□□□□ -0.54
CHMP1B-202ENST00000588284 ZHX3Q9H4I2 956 aa11.65□□□□□ -0.54
CHMP1B-202ENST00000588284 SLC39A2Q9NP94 309 aa11.65□□□□□ -0.54
CHMP1B-202ENST00000588284 ZNF302Q9NR11 478 aa11.65□□□□□ -0.54
CHMP1B-202ENST00000588284 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.65□□□□□ -0.54
CHMP1B-202ENST00000588284 NFE2L3Q9Y4A8 694 aa11.65□□□□□ -0.54
CHMP1B-202ENST00000588284 SYNGAP1Q96PV0 1343 aa11.64□□□□□ -0.55
CHMP1B-202ENST00000588284 SYNRGQ9UMZ2 1314 aa11.64□□□□□ -0.55
CHMP1B-202ENST00000588284 IGKV6D-21A0A0A0MT36 114 aa11.64□□□□□ -0.55
CHMP1B-202ENST00000588284 RASSF10A6NK89 507 aa11.64□□□□□ -0.55
CHMP1B-202ENST00000588284 GOLGA6L6A8MZA4 724 aa11.64□□□□□ -0.55
CHMP1B-202ENST00000588284 NKRFO15226 690 aaKnown RBP eCLIP11.64□□□□□ -0.55
CHMP1B-202ENST00000588284 FARP2O94887 1054 aaPredicted RBP11.64□□□□□ -0.55
CHMP1B-202ENST00000588284 TPM3P06753 285 aa11.64□□□□□ -0.55
CHMP1B-202ENST00000588284 HOXC6P09630 235 aa11.64□□□□□ -0.55
CHMP1B-202ENST00000588284 RARRES1P49788 294 aa11.64□□□□□ -0.55
CHMP1B-202ENST00000588284 ZNF75DP51815 510 aa11.64□□□□□ -0.55
CHMP1B-202ENST00000588284 XKR9Q5GH70 373 aa11.64□□□□□ -0.55
CHMP1B-202ENST00000588284 MORN1Q5T089 497 aa11.64□□□□□ -0.55
CHMP1B-202ENST00000588284 CENPPQ6IPU0 288 aa11.64□□□□□ -0.55
CHMP1B-202ENST00000588284 CYP4F22Q6NT55 531 aa11.64□□□□□ -0.55
CHMP1B-202ENST00000588284 CCDC62Q6P9F0 684 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms