RNA–Protein interactions for RNA: ENST00000587776.1

HDAC5-206, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 917 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-206ENST00000587776 LINC01565O15544 149 aa17.3■□□□□ 0.36
HDAC5-206ENST00000587776 MBTPS2O43462 519 aa17.3■□□□□ 0.36
HDAC5-206ENST00000587776 TBX10O75333 385 aa17.3■□□□□ 0.36
HDAC5-206ENST00000587776 SCG2P13521 617 aa17.3■□□□□ 0.36
HDAC5-206ENST00000587776 IRS1P35568 1242 aa17.3■□□□□ 0.36
HDAC5-206ENST00000587776 STAT5BP51692 787 aa17.3■□□□□ 0.36
HDAC5-206ENST00000587776 ACTR2P61160 394 aa17.3■□□□□ 0.36
HDAC5-206ENST00000587776 SMAD4Q13485 552 aaKnown RBP17.3■□□□□ 0.36
HDAC5-206ENST00000587776 PLCB4Q15147 1175 aa17.3■□□□□ 0.36
HDAC5-206ENST00000587776 SMAD2Q15796 467 aaKnown RBP17.3■□□□□ 0.36
HDAC5-206ENST00000587776 CREB3L3Q68CJ9 461 aa17.3■□□□□ 0.36
HDAC5-206ENST00000587776 WWC2Q6AWC2 1192 aa17.3■□□□□ 0.36
HDAC5-206ENST00000587776 PCYT2Q99447 389 aa17.3■□□□□ 0.36
HDAC5-206ENST00000587776 CD207Q9UJ71 328 aa17.3■□□□□ 0.36
HDAC5-206ENST00000587776 PADI3Q9ULW8 664 aa17.3■□□□□ 0.36
HDAC5-206ENST00000587776 PLAGL2Q9UPG8 496 aa17.3■□□□□ 0.36
HDAC5-206ENST00000587776 PCDHA2Q9Y5H9 948 aa17.3■□□□□ 0.36
HDAC5-206ENST00000587776 WDR81Q562E7 1941 aa17.29■□□□□ 0.36
HDAC5-206ENST00000587776 CNTNAP5Q8WYK1 1306 aa17.29■□□□□ 0.36
HDAC5-206ENST00000587776 IGSF9BQ9UPX0 1349 aa17.29■□□□□ 0.36
HDAC5-206ENST00000587776 POTEB3A0JP26 581 aa17.29■□□□□ 0.36
HDAC5-206ENST00000587776 C19orf67A6NJJ6 358 aa17.29■□□□□ 0.36
HDAC5-206ENST00000587776 ZNF76P36508 570 aa17.29■□□□□ 0.36
HDAC5-206ENST00000587776 ADCY7P51828 1080 aa17.29■□□□□ 0.36
HDAC5-206ENST00000587776 KRT76Q01546 638 aa17.29■□□□□ 0.36
HDAC5-206ENST00000587776 COL9A3Q14050 684 aaPredicted RBP17.29■□□□□ 0.36
HDAC5-206ENST00000587776 NAALADL2Q58DX5 795 aa17.29■□□□□ 0.36
HDAC5-206ENST00000587776 SPOUT1Q5T280 376 aaKnown RBP17.29■□□□□ 0.36
HDAC5-206ENST00000587776 POTEBQ6S5H4 581 aa17.29■□□□□ 0.36
HDAC5-206ENST00000587776 PLPPR4Q7Z2D5 763 aa17.29■□□□□ 0.36
HDAC5-206ENST00000587776 ESYT1Q9BSJ8 1104 aa17.29■□□□□ 0.36
HDAC5-206ENST00000587776 CELF4Q9BZC1 486 aaKnown RBP17.29■□□□□ 0.36
HDAC5-206ENST00000587776 RBM28Q9NW13 759 aaKnown RBP17.29■□□□□ 0.36
HDAC5-206ENST00000587776 GINS2Q9Y248 185 aa17.29■□□□□ 0.36
HDAC5-206ENST00000587776 DDX39AO00148 427 aaKnown RBP17.28■□□□□ 0.36
HDAC5-206ENST00000587776 STXBP3O00186 592 aa17.28■□□□□ 0.36
HDAC5-206ENST00000587776 BACH1O14867 736 aa17.28■□□□□ 0.36
HDAC5-206ENST00000587776 FOSP01100 380 aaPredicted RBP17.28■□□□□ 0.36
HDAC5-206ENST00000587776 ITGB1P05556 798 aa17.28■□□□□ 0.36
HDAC5-206ENST00000587776 ARP10275 920 aa17.28■□□□□ 0.36
HDAC5-206ENST00000587776 NFX1Q12986 1120 aaKnown RBP17.28■□□□□ 0.36
HDAC5-206ENST00000587776 FAM160B1Q5W0V3 765 aa17.28■□□□□ 0.36
HDAC5-206ENST00000587776 PPP1R18Q6NYC8 613 aa17.28■□□□□ 0.36
HDAC5-206ENST00000587776 RTN4RL1Q86UN2 441 aaPredicted RBP17.28■□□□□ 0.36
HDAC5-206ENST00000587776 ALYREFQ86V81 257 aaKnown RBP17.28■□□□□ 0.36
HDAC5-206ENST00000587776 KLHL23Q8NBE8 558 aa17.28■□□□□ 0.36
HDAC5-206ENST00000587776 CYP2W1Q8TAV3 490 aa17.28■□□□□ 0.36
HDAC5-206ENST00000587776 ANO3Q9BYT9 981 aa17.28■□□□□ 0.36
HDAC5-206ENST00000587776 RIC8AQ9NPQ8 531 aa17.28■□□□□ 0.36
HDAC5-206ENST00000587776 SMIM35A0A1B0GVV1 85 aa17.27■□□□□ 0.36
HDAC5-206ENST00000587776 SLC26A2P50443 739 aa17.27■□□□□ 0.36
HDAC5-206ENST00000587776 ADAM15Q13444 863 aa17.27■□□□□ 0.36
HDAC5-206ENST00000587776 RTN1Q16799 776 aa17.27■□□□□ 0.36
HDAC5-206ENST00000587776 TMEM266Q2M3C6 531 aa17.27■□□□□ 0.36
HDAC5-206ENST00000587776 CEP55Q53EZ4 464 aa17.27■□□□□ 0.36
HDAC5-206ENST00000587776 RNF20Q5VTR2 975 aa17.27■□□□□ 0.36
HDAC5-206ENST00000587776 APOA5Q6Q788 366 aa17.27■□□□□ 0.36
HDAC5-206ENST00000587776 MTHFD1LQ6UB35 978 aa17.27■□□□□ 0.36
HDAC5-206ENST00000587776 SGMS1Q86VZ5 419 aa17.27■□□□□ 0.36
HDAC5-206ENST00000587776 NME8Q8N427 588 aa17.27■□□□□ 0.36
HDAC5-206ENST00000587776 POF1BQ8WVV4 589 aa17.27■□□□□ 0.36
HDAC5-206ENST00000587776 AGO4Q9HCK5 861 aaKnown RBP17.27■□□□□ 0.36
HDAC5-206ENST00000587776 MUTYHQ9UIF7 546 aa17.27■□□□□ 0.36
HDAC5-206ENST00000587776 PCDHB7Q9Y5E2 793 aa17.27■□□□□ 0.36
HDAC5-206ENST00000587776 DENND3A2RUS2 1198 aa17.26■□□□□ 0.35
HDAC5-206ENST00000587776 hCG_1984214I3L0E3 225 aa17.26■□□□□ 0.35
HDAC5-206ENST00000587776 PPFIA3O75145 1194 aa17.26■□□□□ 0.35
HDAC5-206ENST00000587776 DNAJB1P25685 340 aa17.26■□□□□ 0.35
HDAC5-206ENST00000587776 NRIP1P48552 1158 aa17.26■□□□□ 0.35
HDAC5-206ENST00000587776 GATMP50440 423 aa17.26■□□□□ 0.35
HDAC5-206ENST00000587776 ITGB3BPQ13352 177 aaPredicted RBP17.26■□□□□ 0.35
HDAC5-206ENST00000587776 CAMK1Q14012 370 aa17.26■□□□□ 0.35
HDAC5-206ENST00000587776 NECTIN1Q15223 517 aa17.26■□□□□ 0.35
HDAC5-206ENST00000587776 ADGRD2Q7Z7M1 963 aa17.26■□□□□ 0.35
HDAC5-206ENST00000587776 RBM23Q86U06 439 aaKnown RBP17.26■□□□□ 0.35
HDAC5-206ENST00000587776 ZNF713Q8N859 430 aaPredicted RBP17.26■□□□□ 0.35
HDAC5-206ENST00000587776 SPPL3Q8TCT6 385 aa17.26■□□□□ 0.35
HDAC5-206ENST00000587776 RNF216Q9NWF9 866 aaPredicted RBP17.26■□□□□ 0.35
HDAC5-206ENST00000587776 NAP1L2Q9ULW6 460 aaPredicted RBP17.26■□□□□ 0.35
HDAC5-206ENST00000587776 PCDHB12Q9Y5F1 795 aa17.26■□□□□ 0.35
HDAC5-206ENST00000587776 KDM3AQ9Y4C1 1321 aa17.25■□□□□ 0.35
HDAC5-206ENST00000587776 SMCO2A6NFE2 343 aa17.25■□□□□ 0.35
HDAC5-206ENST00000587776 ZBTB43O43298 467 aa17.25■□□□□ 0.35
HDAC5-206ENST00000587776 HBP1O60381 514 aa17.25■□□□□ 0.35
HDAC5-206ENST00000587776 RPS6KA5O75582 802 aa17.25■□□□□ 0.35
HDAC5-206ENST00000587776 KLRC1P26715 233 aa17.25■□□□□ 0.35
HDAC5-206ENST00000587776 SARSP49591 514 aaKnown RBP17.25■□□□□ 0.35
HDAC5-206ENST00000587776 AP3B2Q13367 1082 aa17.25■□□□□ 0.35
HDAC5-206ENST00000587776 ODR4Q5SWX8 454 aa17.25■□□□□ 0.35
HDAC5-206ENST00000587776 TYW1BQ6NUM6 668 aa17.25■□□□□ 0.35
HDAC5-206ENST00000587776 RNF135Q8IUD6 432 aa17.25■□□□□ 0.35
HDAC5-206ENST00000587776 CKAP2LQ8IYA6 745 aa17.25■□□□□ 0.35
HDAC5-206ENST00000587776 EFHBQ8N7U6 833 aa17.25■□□□□ 0.35
HDAC5-206ENST00000587776 MICAL1Q8TDZ2 1067 aa17.25■□□□□ 0.35
HDAC5-206ENST00000587776 GLT8D2Q9H1C3 349 aa17.25■□□□□ 0.35
HDAC5-206ENST00000587776 AAASQ9NRG9 546 aa17.25■□□□□ 0.35
HDAC5-206ENST00000587776 TMEM260Q9NX78 707 aa17.25■□□□□ 0.35
HDAC5-206ENST00000587776 TCEAL9Q9UHQ7 104 aa17.25■□□□□ 0.35
HDAC5-206ENST00000587776 C5orf42Q9H799 3197 aa17.25■□□□□ 0.35
HDAC5-206ENST00000587776 GOLGA8AA7E2F4 631 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms