RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 IGSF9BQ9UPX0 1349 aa16.06■□□□□ 0.16
DNMT1-213ENST00000587604 MBTPS2O43462 519 aa16.06■□□□□ 0.16
DNMT1-213ENST00000587604 FOSP01100 380 aaPredicted RBP16.06■□□□□ 0.16
DNMT1-213ENST00000587604 STAG3L1P0CL83 205 aa16.06■□□□□ 0.16
DNMT1-213ENST00000587604 GTF2F1P35269 517 aaKnown RBP eCLIP16.06■□□□□ 0.16
DNMT1-213ENST00000587604 TMEM62Q0P6H9 643 aa16.06■□□□□ 0.16
DNMT1-213ENST00000587604 ADAM15Q13444 863 aa16.06■□□□□ 0.16
DNMT1-213ENST00000587604 PLCB4Q15147 1175 aa16.06■□□□□ 0.16
DNMT1-213ENST00000587604 CREB3L3Q68CJ9 461 aa16.06■□□□□ 0.16
DNMT1-213ENST00000587604 SYNE3Q6ZMZ3 975 aa16.06■□□□□ 0.16
DNMT1-213ENST00000587604 FAM43BQ6ZT52 329 aaPredicted RBP16.06■□□□□ 0.16
DNMT1-213ENST00000587604 MICU3Q86XE3 530 aa16.06■□□□□ 0.16
DNMT1-213ENST00000587604 PPP2R3CQ969Q6 453 aa16.06■□□□□ 0.16
DNMT1-213ENST00000587604 POP1Q99575 1024 aaKnown RBP16.06■□□□□ 0.16
DNMT1-213ENST00000587604 ESYT1Q9BSJ8 1104 aa16.06■□□□□ 0.16
DNMT1-213ENST00000587604 LRRC2Q9BYS8 371 aa16.06■□□□□ 0.16
DNMT1-213ENST00000587604 IGFLR1Q9H665 355 aa16.06■□□□□ 0.16
DNMT1-213ENST00000587604 RIC8AQ9NPQ8 531 aa16.06■□□□□ 0.16
DNMT1-213ENST00000587604 ZNF318Q5VUA4 2279 aa16.06■□□□□ 0.16
DNMT1-213ENST00000587604 KIAA1671Q9BY89 1806 aa16.05■□□□□ 0.16
DNMT1-213ENST00000587604 KDM3AQ9Y4C1 1321 aa16.05■□□□□ 0.16
DNMT1-213ENST00000587604 SMIM35A0A1B0GVV1 85 aa16.05■□□□□ 0.16
DNMT1-213ENST00000587604 ATG7O95352 703 aa16.05■□□□□ 0.16
DNMT1-213ENST00000587604 ARP10275 920 aa16.05■□□□□ 0.16
DNMT1-213ENST00000587604 IRS1P35568 1242 aa16.05■□□□□ 0.16
DNMT1-213ENST00000587604 SLC26A2P50443 739 aa16.05■□□□□ 0.16
DNMT1-213ENST00000587604 PAK2Q13177 524 aa16.05■□□□□ 0.16
DNMT1-213ENST00000587604 SMAD4Q13485 552 aaKnown RBP16.05■□□□□ 0.16
DNMT1-213ENST00000587604 CLUL1Q15846 466 aa16.05■□□□□ 0.16
DNMT1-213ENST00000587604 CEP55Q53EZ4 464 aa16.05■□□□□ 0.16
DNMT1-213ENST00000587604 WWC2Q6AWC2 1192 aa16.05■□□□□ 0.16
DNMT1-213ENST00000587604 MTHFD1LQ6UB35 978 aa16.05■□□□□ 0.16
DNMT1-213ENST00000587604 SPPL3Q8TCT6 385 aa16.05■□□□□ 0.16
DNMT1-213ENST00000587604 TRAPPC12Q8WVT3 735 aa16.05■□□□□ 0.16
DNMT1-213ENST00000587604 RBM28Q9NW13 759 aaKnown RBP16.05■□□□□ 0.16
DNMT1-213ENST00000587604 CD207Q9UJ71 328 aa16.05■□□□□ 0.16
DNMT1-213ENST00000587604 MEIS1O00470 390 aa16.04■□□□□ 0.16
DNMT1-213ENST00000587604 TBX10O75333 385 aa16.04■□□□□ 0.16
DNMT1-213ENST00000587604 ITGB1P05556 798 aa16.04■□□□□ 0.16
DNMT1-213ENST00000587604 SCG2P13521 617 aa16.04■□□□□ 0.16
DNMT1-213ENST00000587604 DNAJB1P25685 340 aa16.04■□□□□ 0.16
DNMT1-213ENST00000587604 NAPAP54920 295 aa16.04■□□□□ 0.16
DNMT1-213ENST00000587604 KRT76Q01546 638 aa16.04■□□□□ 0.16
DNMT1-213ENST00000587604 ITGB3BPQ13352 177 aaPredicted RBP16.04■□□□□ 0.16
DNMT1-213ENST00000587604 TYW1BQ6NUM6 668 aa16.04■□□□□ 0.16
DNMT1-213ENST00000587604 PPP1R18Q6NYC8 613 aa16.04■□□□□ 0.16
DNMT1-213ENST00000587604 KLHL23Q8NBE8 558 aa16.04■□□□□ 0.16
DNMT1-213ENST00000587604 AGO4Q9HCK5 861 aaKnown RBP16.04■□□□□ 0.16
DNMT1-213ENST00000587604 TECTAO75443 2155 aa16.03■□□□□ 0.16
DNMT1-213ENST00000587604 CNTNAP5Q8WYK1 1306 aa16.03■□□□□ 0.16
DNMT1-213ENST00000587604 IGKV6D-21A0A0A0MT36 114 aa16.03■□□□□ 0.16
DNMT1-213ENST00000587604 LINC01565O15544 149 aa16.03■□□□□ 0.16
DNMT1-213ENST00000587604 CSPG5O95196 566 aa16.03■□□□□ 0.16
DNMT1-213ENST00000587604 EYA4O95677 639 aa16.03■□□□□ 0.16
DNMT1-213ENST00000587604 KLRC1P26715 233 aa16.03■□□□□ 0.16
DNMT1-213ENST00000587604 ADCY7P51828 1080 aa16.03■□□□□ 0.16
DNMT1-213ENST00000587604 APOA5Q6Q788 366 aa16.03■□□□□ 0.16
DNMT1-213ENST00000587604 PGBD1Q96JS3 809 aa16.03■□□□□ 0.16
DNMT1-213ENST00000587604 GLT8D2Q9H1C3 349 aa16.03■□□□□ 0.16
DNMT1-213ENST00000587604 KCNH6Q9H252 994 aa16.03■□□□□ 0.16
DNMT1-213ENST00000587604 TMX1Q9H3N1 280 aa16.03■□□□□ 0.16
DNMT1-213ENST00000587604 ANO2Q9NQ90 1003 aa16.03■□□□□ 0.16
DNMT1-213ENST00000587604 LRFN2Q9ULH4 789 aa16.03■□□□□ 0.16
DNMT1-213ENST00000587604 V9GY48 417 aaPredicted RBP16.03■□□□□ 0.16
DNMT1-213ENST00000587604 MYH9P35579 1960 aaKnown RBP16.03■□□□□ 0.16
DNMT1-213ENST00000587604 WDFY4Q6ZS81 3184 aa16.02■□□□□ 0.16
DNMT1-213ENST00000587604 FNDC1Q4ZHG4 1894 aaPredicted RBP16.02■□□□□ 0.16
DNMT1-213ENST00000587604 SMCO2A6NFE2 343 aa16.02■□□□□ 0.16
DNMT1-213ENST00000587604 hCG_1984214I3L0E3 225 aa16.02■□□□□ 0.16
DNMT1-213ENST00000587604 STXBP3O00186 592 aa16.02■□□□□ 0.16
DNMT1-213ENST00000587604 HBP1O60381 514 aa16.02■□□□□ 0.16
DNMT1-213ENST00000587604 SARSP49591 514 aaKnown RBP16.02■□□□□ 0.16
DNMT1-213ENST00000587604 NDUFV1P49821 464 aa16.02■□□□□ 0.16
DNMT1-213ENST00000587604 FUT2Q10981 343 aa16.02■□□□□ 0.16
DNMT1-213ENST00000587604 NFX1Q12986 1120 aaKnown RBP16.02■□□□□ 0.16
DNMT1-213ENST00000587604 AP3B2Q13367 1082 aa16.02■□□□□ 0.16
DNMT1-213ENST00000587604 PAN2Q504Q3 1202 aaKnown RBP16.02■□□□□ 0.16
DNMT1-213ENST00000587604 HERC4Q5GLZ8 1057 aaPredicted RBP16.02■□□□□ 0.16
DNMT1-213ENST00000587604 RNF20Q5VTR2 975 aa16.02■□□□□ 0.16
DNMT1-213ENST00000587604 NIPA1Q7RTP0 329 aa16.02■□□□□ 0.16
DNMT1-213ENST00000587604 EFHBQ8N7U6 833 aa16.02■□□□□ 0.16
DNMT1-213ENST00000587604 ZNF713Q8N859 430 aaPredicted RBP16.02■□□□□ 0.16
DNMT1-213ENST00000587604 POF1BQ8WVV4 589 aa16.02■□□□□ 0.16
DNMT1-213ENST00000587604 MSLNLQ96KJ4 702 aa16.02■□□□□ 0.16
DNMT1-213ENST00000587604 ANO3Q9BYT9 981 aa16.02■□□□□ 0.16
DNMT1-213ENST00000587604 RNF216Q9NWF9 866 aaPredicted RBP16.02■□□□□ 0.16
DNMT1-213ENST00000587604 PCDHB7Q9Y5E2 793 aa16.02■□□□□ 0.16
DNMT1-213ENST00000587604 ZBTB43O43298 467 aa16.01■□□□□ 0.15
DNMT1-213ENST00000587604 CCNE2O96020 404 aa16.01■□□□□ 0.15
DNMT1-213ENST00000587604 ZNF76P36508 570 aa16.01■□□□□ 0.15
DNMT1-213ENST00000587604 SREBF1P36956 1147 aa16.01■□□□□ 0.15
DNMT1-213ENST00000587604 CLK2P49760 499 aaKnown RBP16.01■□□□□ 0.15
DNMT1-213ENST00000587604 EXOSC10Q01780 885 aaKnown RBP16.01■□□□□ 0.15
DNMT1-213ENST00000587604 COASYQ13057 564 aa16.01■□□□□ 0.15
DNMT1-213ENST00000587604 RTN1Q16799 776 aa16.01■□□□□ 0.15
DNMT1-213ENST00000587604 TMEM266Q2M3C6 531 aa16.01■□□□□ 0.15
DNMT1-213ENST00000587604 FAM160B1Q5W0V3 765 aa16.01■□□□□ 0.15
DNMT1-213ENST00000587604 ABHD15Q6UXT9 468 aa16.01■□□□□ 0.15
DNMT1-213ENST00000587604 ADGRD2Q7Z7M1 963 aa16.01■□□□□ 0.15
DNMT1-213ENST00000587604 RNF135Q8IUD6 432 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms