RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 SEC63Q9UGP8 760 aaKnown RBP13.63□□□□□ -0.23
BRCA1-225ENST00000586385 PCDHA2Q9Y5H9 948 aa13.63□□□□□ -0.23
BRCA1-225ENST00000586385 SQORQ9Y6N5 450 aa13.63□□□□□ -0.23
BRCA1-225ENST00000586385 TRIOO75962 3097 aa13.63□□□□□ -0.23
BRCA1-225ENST00000586385 WDFY4Q6ZS81 3184 aa13.63□□□□□ -0.23
BRCA1-225ENST00000586385 RRN3P2A6NIE6 340 aa13.62□□□□□ -0.23
BRCA1-225ENST00000586385 LOC730098B7Z3J9 87 aa13.62□□□□□ -0.23
BRCA1-225ENST00000586385 ARP10275 920 aa13.62□□□□□ -0.23
BRCA1-225ENST00000586385 SCG2P13521 617 aa13.62□□□□□ -0.23
BRCA1-225ENST00000586385 NRIP1P48552 1158 aa13.62□□□□□ -0.23
BRCA1-225ENST00000586385 ACTR2P61160 394 aa13.62□□□□□ -0.23
BRCA1-225ENST00000586385 COASYQ13057 564 aa13.62□□□□□ -0.23
BRCA1-225ENST00000586385 TMEM266Q2M3C6 531 aa13.62□□□□□ -0.23
BRCA1-225ENST00000586385 NAALADL2Q58DX5 795 aa13.62□□□□□ -0.23
BRCA1-225ENST00000586385 IER5LQ5T953 404 aa13.62□□□□□ -0.23
BRCA1-225ENST00000586385 TMTC3Q6ZXV5 915 aa13.62□□□□□ -0.23
BRCA1-225ENST00000586385 PRSS33Q8NF86 280 aa13.62□□□□□ -0.23
BRCA1-225ENST00000586385 VN1R2Q8NFZ6 395 aa13.62□□□□□ -0.23
BRCA1-225ENST00000586385 EDAQ92838 391 aa13.62□□□□□ -0.23
BRCA1-225ENST00000586385 PGBD1Q96JS3 809 aa13.62□□□□□ -0.23
BRCA1-225ENST00000586385 POP1Q99575 1024 aaKnown RBP13.62□□□□□ -0.23
BRCA1-225ENST00000586385 MXRA8Q9BRK3 442 aa13.62□□□□□ -0.23
BRCA1-225ENST00000586385 MTA3Q9BTC8 594 aa13.62□□□□□ -0.23
BRCA1-225ENST00000586385 CELF4Q9BZC1 486 aaKnown RBP13.62□□□□□ -0.23
BRCA1-225ENST00000586385 LSG1Q9H089 658 aaKnown RBP13.62□□□□□ -0.23
BRCA1-225ENST00000586385 SLC9A2Q9UBY0 812 aa13.62□□□□□ -0.23
BRCA1-225ENST00000586385 BARX2Q9UMQ3 279 aaPredicted RBP13.62□□□□□ -0.23
BRCA1-225ENST00000586385 KDM3AQ9Y4C1 1321 aa13.62□□□□□ -0.23
BRCA1-225ENST00000586385 MAFGO15525 162 aa13.61□□□□□ -0.23
BRCA1-225ENST00000586385 ATG7O95352 703 aa13.61□□□□□ -0.23
BRCA1-225ENST00000586385 CCNE2O96020 404 aa13.61□□□□□ -0.23
BRCA1-225ENST00000586385 NDUFV1P49821 464 aa13.61□□□□□ -0.23
BRCA1-225ENST00000586385 GNAQP50148 359 aa13.61□□□□□ -0.23
BRCA1-225ENST00000586385 FUT2Q10981 343 aa13.61□□□□□ -0.23
BRCA1-225ENST00000586385 CBX2Q14781 532 aaPredicted RBP13.61□□□□□ -0.23
BRCA1-225ENST00000586385 IER5Q5VY09 327 aa13.61□□□□□ -0.23
BRCA1-225ENST00000586385 WWC2Q6AWC2 1192 aa13.61□□□□□ -0.23
BRCA1-225ENST00000586385 RBM23Q86U06 439 aaKnown RBP13.61□□□□□ -0.23
BRCA1-225ENST00000586385 CCDC82Q8N4S0 544 aa13.61□□□□□ -0.23
BRCA1-225ENST00000586385 TMEM40Q8WWA1 233 aa13.61□□□□□ -0.23
BRCA1-225ENST00000586385 FTHL17Q9BXU8 183 aa13.61□□□□□ -0.23
BRCA1-225ENST00000586385 LRRC2Q9BYS8 371 aa13.61□□□□□ -0.23
BRCA1-225ENST00000586385 ERVK-5Q9HDB9 667 aa13.61□□□□□ -0.23
BRCA1-225ENST00000586385 USP15Q9Y4E8 981 aaPredicted RBP13.61□□□□□ -0.23
BRCA1-225ENST00000586385 NFASCO94856 1347 aa13.61□□□□□ -0.23
BRCA1-225ENST00000586385 KIAA1671Q9BY89 1806 aa13.6□□□□□ -0.23
BRCA1-225ENST00000586385 IGKV6D-21A0A0A0MT36 114 aa13.6□□□□□ -0.23
BRCA1-225ENST00000586385 SMIM35A0A1B0GVV1 85 aa13.6□□□□□ -0.23
BRCA1-225ENST00000586385 SPDYE3A6NKU9 549 aa13.6□□□□□ -0.23
BRCA1-225ENST00000586385 ZBTB42B2RXF5 422 aa13.6□□□□□ -0.23
BRCA1-225ENST00000586385 SLC27A2O14975 620 aa13.6□□□□□ -0.23
BRCA1-225ENST00000586385 LIFRP42702 1097 aa13.6□□□□□ -0.23
BRCA1-225ENST00000586385 PAK2Q13177 524 aa13.6□□□□□ -0.23
BRCA1-225ENST00000586385 CASC1Q6TDU7 716 aa13.6□□□□□ -0.23
BRCA1-225ENST00000586385 MTHFD1LQ6UB35 978 aa13.6□□□□□ -0.23
BRCA1-225ENST00000586385 NFXL1Q6ZNB6 911 aa13.6□□□□□ -0.23
BRCA1-225ENST00000586385 PLPPR4Q7Z2D5 763 aa13.6□□□□□ -0.23
BRCA1-225ENST00000586385 BMP8AQ7Z5Y6 402 aa13.6□□□□□ -0.23
BRCA1-225ENST00000586385 FANCBQ8NB91 859 aa13.6□□□□□ -0.23
BRCA1-225ENST00000586385 ATP8B4Q8TF62 1192 aa13.6□□□□□ -0.23
BRCA1-225ENST00000586385 TMEM87BQ96K49 555 aa13.6□□□□□ -0.23
BRCA1-225ENST00000586385 AGO4Q9HCK5 861 aaKnown RBP13.6□□□□□ -0.23
BRCA1-225ENST00000586385 TRPC6Q9Y210 931 aa13.6□□□□□ -0.23
BRCA1-225ENST00000586385 NOC2LQ9Y3T9 749 aaKnown RBP13.6□□□□□ -0.23
BRCA1-225ENST00000586385 TMEM221A6NGB7 291 aa13.59□□□□□ -0.23
BRCA1-225ENST00000586385 CCDC69A6NI79 296 aa13.59□□□□□ -0.23
BRCA1-225ENST00000586385 M0R296 226 aa13.59□□□□□ -0.23
BRCA1-225ENST00000586385 ADAMTS3O15072 1205 aa13.59□□□□□ -0.23
BRCA1-225ENST00000586385 STAG3L1P0CL83 205 aa13.59□□□□□ -0.23
BRCA1-225ENST00000586385 ATP4AP20648 1035 aa13.59□□□□□ -0.23
BRCA1-225ENST00000586385 MCM5P33992 734 aa13.59□□□□□ -0.23
BRCA1-225ENST00000586385 SARSP49591 514 aaKnown RBP13.59□□□□□ -0.23
BRCA1-225ENST00000586385 STAT5BP51692 787 aa13.59□□□□□ -0.23
BRCA1-225ENST00000586385 ERVFC1P60507 584 aa13.59□□□□□ -0.23
BRCA1-225ENST00000586385 KRT76Q01546 638 aa13.59□□□□□ -0.23
BRCA1-225ENST00000586385 FAM102BQ5T8I3 360 aa13.59□□□□□ -0.23
BRCA1-225ENST00000586385 TRIM67Q6ZTA4 783 aa13.59□□□□□ -0.23
BRCA1-225ENST00000586385 HEATR3Q7Z4Q2 680 aa13.59□□□□□ -0.23
BRCA1-225ENST00000586385 KIAA0319LQ8IZA0 1049 aa13.59□□□□□ -0.23
BRCA1-225ENST00000586385 TMTC2Q8N394 836 aa13.59□□□□□ -0.23
BRCA1-225ENST00000586385 SUSD6Q92537 303 aa13.59□□□□□ -0.23
BRCA1-225ENST00000586385 MFSD14AQ96MC6 490 aa13.59□□□□□ -0.23
BRCA1-225ENST00000586385 AZI2Q9H6S1 392 aa13.59□□□□□ -0.23
BRCA1-225ENST00000586385 CNTNAP5Q8WYK1 1306 aa13.59□□□□□ -0.23
BRCA1-225ENST00000586385 KAT6AQ92794 2004 aa13.58□□□□□ -0.24
BRCA1-225ENST00000586385 C9IYK1 514 aa13.58□□□□□ -0.24
BRCA1-225ENST00000586385 MEIS1O00470 390 aa13.58□□□□□ -0.24
BRCA1-225ENST00000586385 FSCN2O14926 492 aa13.58□□□□□ -0.24
BRCA1-225ENST00000586385 PER2O15055 1255 aa13.58□□□□□ -0.24
BRCA1-225ENST00000586385 DHX15O43143 795 aaKnown RBP13.58□□□□□ -0.24
BRCA1-225ENST00000586385 PPFIA3O75145 1194 aa13.58□□□□□ -0.24
BRCA1-225ENST00000586385 RPLP2P05387 115 aaKnown RBP13.58□□□□□ -0.24
BRCA1-225ENST00000586385 KLRC1P26715 233 aa13.58□□□□□ -0.24
BRCA1-225ENST00000586385 ZXDAP98168 799 aa13.58□□□□□ -0.24
BRCA1-225ENST00000586385 TCF15Q12870 199 aa13.58□□□□□ -0.24
BRCA1-225ENST00000586385 KCNC3Q14003 757 aa13.58□□□□□ -0.24
BRCA1-225ENST00000586385 NECTIN1Q15223 517 aa13.58□□□□□ -0.24
BRCA1-225ENST00000586385 CEP55Q53EZ4 464 aa13.58□□□□□ -0.24
BRCA1-225ENST00000586385 ABHD15Q6UXT9 468 aa13.58□□□□□ -0.24
BRCA1-225ENST00000586385 SGMS1Q86VZ5 419 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms