RNA–Protein interactions for RNA: ENST00000585854.1

CHAF1A-203, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 2

Gene CHAF1A, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-203ENST00000585854 FAM50BQ9Y247 325 aa23.24■■□□□ 1.31
CHAF1A-203ENST00000585854 PCDHA2Q9Y5H9 948 aa23.24■■□□□ 1.31
CHAF1A-203ENST00000585854 KLF18A0A0U1RQI7 1052 aa23.23■■□□□ 1.31
CHAF1A-203ENST00000585854 POTEB3A0JP26 581 aa23.23■■□□□ 1.31
CHAF1A-203ENST00000585854 STXBP3O00186 592 aa23.23■■□□□ 1.31
CHAF1A-203ENST00000585854 BACH1O14867 736 aa23.23■■□□□ 1.31
CHAF1A-203ENST00000585854 LINC00271P0C7V0 271 aa23.23■■□□□ 1.31
CHAF1A-203ENST00000585854 ITGB3BPQ13352 177 aaPredicted RBP23.23■■□□□ 1.31
CHAF1A-203ENST00000585854 POTEBQ6S5H4 581 aa23.23■■□□□ 1.31
CHAF1A-203ENST00000585854 DHX32Q7L7V1 743 aaKnown RBP23.23■■□□□ 1.31
CHAF1A-203ENST00000585854 PLPPR4Q7Z2D5 763 aa23.23■■□□□ 1.31
CHAF1A-203ENST00000585854 ZNF689Q96CS4 500 aaPredicted RBP23.23■■□□□ 1.31
CHAF1A-203ENST00000585854 UIMC1Q96RL1 719 aa23.23■■□□□ 1.31
CHAF1A-203ENST00000585854 FTHL17Q9BXU8 183 aa23.23■■□□□ 1.31
CHAF1A-203ENST00000585854 GINS2Q9Y248 185 aa23.23■■□□□ 1.31
CHAF1A-203ENST00000585854 FGD1P98174 961 aa23.22■■□□□ 1.31
CHAF1A-203ENST00000585854 NFX1Q12986 1120 aaKnown RBP23.22■■□□□ 1.31
CHAF1A-203ENST00000585854 RTN4RL1Q86UN2 441 aaPredicted RBP23.22■■□□□ 1.31
CHAF1A-203ENST00000585854 NPAS4Q8IUM7 802 aa23.22■■□□□ 1.31
CHAF1A-203ENST00000585854 CLP1Q92989 425 aaKnown RBP23.22■■□□□ 1.31
CHAF1A-203ENST00000585854 CELF4Q9BZC1 486 aaKnown RBP23.22■■□□□ 1.31
CHAF1A-203ENST00000585854 LRFN2Q9ULH4 789 aa23.22■■□□□ 1.31
CHAF1A-203ENST00000585854 PADI3Q9ULW8 664 aa23.22■■□□□ 1.31
CHAF1A-203ENST00000585854 MRPL42Q9Y6G3 142 aaKnown RBP23.22■■□□□ 1.31
CHAF1A-203ENST00000585854 NCK2O43639 380 aa23.21■■□□□ 1.31
CHAF1A-203ENST00000585854 STAG3L1P0CL83 205 aa23.21■■□□□ 1.31
CHAF1A-203ENST00000585854 KRT76Q01546 638 aa23.21■■□□□ 1.31
CHAF1A-203ENST00000585854 EXOSC10Q01780 885 aaKnown RBP23.21■■□□□ 1.31
CHAF1A-203ENST00000585854 HYAL1Q12794 435 aa23.21■■□□□ 1.31
CHAF1A-203ENST00000585854 TMEM266Q2M3C6 531 aa23.21■■□□□ 1.31
CHAF1A-203ENST00000585854 ADCK5Q3MIX3 580 aa23.21■■□□□ 1.31
CHAF1A-203ENST00000585854 BMP2KLQ5H9B9 411 aa23.21■■□□□ 1.31
CHAF1A-203ENST00000585854 JAKMIP3Q5VZ66 844 aa23.21■■□□□ 1.31
CHAF1A-203ENST00000585854 MTHFD1LQ6UB35 978 aa23.21■■□□□ 1.31
CHAF1A-203ENST00000585854 BARHL2Q9NY43 387 aa23.21■■□□□ 1.31
CHAF1A-203ENST00000585854 SQORQ9Y6N5 450 aa23.21■■□□□ 1.31
CHAF1A-203ENST00000585854 IGSF9BQ9UPX0 1349 aa23.2■■□□□ 1.3
CHAF1A-203ENST00000585854 hCG_1984214I3L0E3 225 aa23.2■■□□□ 1.3
CHAF1A-203ENST00000585854 SCG2P13521 617 aa23.2■■□□□ 1.3
CHAF1A-203ENST00000585854 KLRC1P26715 233 aa23.2■■□□□ 1.3
CHAF1A-203ENST00000585854 GTF2F1P35269 517 aaKnown RBP eCLIP23.2■■□□□ 1.3
CHAF1A-203ENST00000585854 SREBF1P36956 1147 aa23.2■■□□□ 1.3
CHAF1A-203ENST00000585854 FUT2Q10981 343 aa23.2■■□□□ 1.3
CHAF1A-203ENST00000585854 AP3B2Q13367 1082 aa23.2■■□□□ 1.3
CHAF1A-203ENST00000585854 FAM160B1Q5W0V3 765 aa23.2■■□□□ 1.3
CHAF1A-203ENST00000585854 PLA2G4DQ86XP0 818 aa23.2■■□□□ 1.3
CHAF1A-203ENST00000585854 RASEFQ8IZ41 740 aa23.2■■□□□ 1.3
CHAF1A-203ENST00000585854 ZNF713Q8N859 430 aaPredicted RBP23.2■■□□□ 1.3
CHAF1A-203ENST00000585854 PLVAPQ9BX97 442 aa23.2■■□□□ 1.3
CHAF1A-203ENST00000585854 SMIM35A0A1B0GVV1 85 aa23.19■■□□□ 1.3
CHAF1A-203ENST00000585854 MEIS1O00470 390 aa23.19■■□□□ 1.3
CHAF1A-203ENST00000585854 MMP1P03956 469 aa23.19■■□□□ 1.3
CHAF1A-203ENST00000585854 ALADP13716 330 aa23.19■■□□□ 1.3
CHAF1A-203ENST00000585854 CDC27P30260 824 aa23.19■■□□□ 1.3
CHAF1A-203ENST00000585854 LTBRP36941 435 aa23.19■■□□□ 1.3
CHAF1A-203ENST00000585854 GATMP50440 423 aa23.19■■□□□ 1.3
CHAF1A-203ENST00000585854 COL19A1Q14993 1142 aa23.19■■□□□ 1.3
CHAF1A-203ENST00000585854 CSPP1Q1MSJ5 1256 aa23.19■■□□□ 1.3
CHAF1A-203ENST00000585854 TRMT1LQ7Z2T5 733 aaKnown RBP23.19■■□□□ 1.3
CHAF1A-203ENST00000585854 CMTR2Q8IYT2 770 aaKnown RBP23.19■■□□□ 1.3
CHAF1A-203ENST00000585854 GLT8D2Q9H1C3 349 aa23.19■■□□□ 1.3
CHAF1A-203ENST00000585854 PLAGL2Q9UPG8 496 aa23.19■■□□□ 1.3
CHAF1A-203ENST00000585854 PLXNA4Q9HCM2 1894 aa23.19■■□□□ 1.3
CHAF1A-203ENST00000585854 WDR81Q562E7 1941 aa23.18■■□□□ 1.3
CHAF1A-203ENST00000585854 HBP1O60381 514 aa23.18■■□□□ 1.3
CHAF1A-203ENST00000585854 ATG7O95352 703 aa23.18■■□□□ 1.3
CHAF1A-203ENST00000585854 CCNE2O96020 404 aa23.18■■□□□ 1.3
CHAF1A-203ENST00000585854 SLC26A2P50443 739 aa23.18■■□□□ 1.3
CHAF1A-203ENST00000585854 ZP2Q05996 745 aa23.18■■□□□ 1.3
CHAF1A-203ENST00000585854 DLX2Q07687 328 aaPredicted RBP23.18■■□□□ 1.3
CHAF1A-203ENST00000585854 PDXDC2PQ6P474 469 aa23.18■■□□□ 1.3
CHAF1A-203ENST00000585854 NME8Q8N427 588 aa23.18■■□□□ 1.3
CHAF1A-203ENST00000585854 PPP1R16BQ96T49 567 aa23.18■■□□□ 1.3
CHAF1A-203ENST00000585854 ZNF302Q9NR11 478 aa23.18■■□□□ 1.3
CHAF1A-203ENST00000585854 FNDC1Q4ZHG4 1894 aaPredicted RBP23.17■■□□□ 1.3
CHAF1A-203ENST00000585854 LINC01565O15544 149 aa23.17■■□□□ 1.3
CHAF1A-203ENST00000585854 CLK2P49760 499 aaKnown RBP23.17■■□□□ 1.3
CHAF1A-203ENST00000585854 KRT32Q14532 448 aa23.17■■□□□ 1.3
CHAF1A-203ENST00000585854 SPOUT1Q5T280 376 aaKnown RBP23.17■■□□□ 1.3
CHAF1A-203ENST00000585854 MIS18BP1Q6P0N0 1132 aa23.17■■□□□ 1.3
CHAF1A-203ENST00000585854 CCDC60Q8IWA6 550 aaPredicted RBP23.17■■□□□ 1.3
CHAF1A-203ENST00000585854 TEX2Q8IWB9 1127 aa23.17■■□□□ 1.3
CHAF1A-203ENST00000585854 CKAP2LQ8IYA6 745 aa23.17■■□□□ 1.3
CHAF1A-203ENST00000585854 ATP8B4Q8TF62 1192 aa23.17■■□□□ 1.3
CHAF1A-203ENST00000585854 FAM217BQ9NTX9 383 aaPredicted RBP23.17■■□□□ 1.3
CHAF1A-203ENST00000585854 KDM3AQ9Y4C1 1321 aa23.16■■□□□ 1.3
CHAF1A-203ENST00000585854 FAM86B1E9PN63 330 aa23.16■■□□□ 1.3
CHAF1A-203ENST00000585854 DCXO43602 365 aa23.16■■□□□ 1.3
CHAF1A-203ENST00000585854 PPFIA3O75145 1194 aa23.16■■□□□ 1.3
CHAF1A-203ENST00000585854 RPS6KA5O75582 802 aa23.16■■□□□ 1.3
CHAF1A-203ENST00000585854 ITGB1P05556 798 aa23.16■■□□□ 1.3
CHAF1A-203ENST00000585854 FAM86B2P0C5J1 330 aa23.16■■□□□ 1.3
CHAF1A-203ENST00000585854 CPA1P15085 419 aa23.16■■□□□ 1.3
CHAF1A-203ENST00000585854 ADD1P35611 737 aaKnown RBP23.16■■□□□ 1.3
CHAF1A-203ENST00000585854 NDUFV1P49821 464 aa23.16■■□□□ 1.3
CHAF1A-203ENST00000585854 METAP2P50579 478 aaKnown RBP eCLIP23.16■■□□□ 1.3
CHAF1A-203ENST00000585854 CTC1Q2NKJ3 1217 aa23.16■■□□□ 1.3
CHAF1A-203ENST00000585854 SWSAP1Q6NVH7 229 aa23.16■■□□□ 1.3
CHAF1A-203ENST00000585854 ABHD15Q6UXT9 468 aa23.16■■□□□ 1.3
CHAF1A-203ENST00000585854 NIPA1Q7RTP0 329 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms