RNA–Protein interactions for RNA: ENST00000585388.1

LSM12-202, Transcript of LSM12 homolog, humanhuman

TSL 3 BASIC

Gene LSM12, Length 942 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-202ENST00000585388 PFKFB3Q16875 520 aaPredicted RBP18.64■□□□□ 0.57
LSM12-202ENST00000585388 TCEAL5Q5H9L2 206 aa18.64■□□□□ 0.57
LSM12-202ENST00000585388 PTCRAQ6ISU1 281 aaPredicted RBP18.64■□□□□ 0.57
LSM12-202ENST00000585388 FAM43BQ6ZT52 329 aaPredicted RBP18.64■□□□□ 0.57
LSM12-202ENST00000585388 NME8Q8N427 588 aa18.64■□□□□ 0.57
LSM12-202ENST00000585388 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.64■□□□□ 0.57
LSM12-202ENST00000585388 TRAPPC12Q8WVT3 735 aa18.64■□□□□ 0.57
LSM12-202ENST00000585388 CLP1Q92989 425 aaKnown RBP18.64■□□□□ 0.57
LSM12-202ENST00000585388 ZNF689Q96CS4 500 aaPredicted RBP18.64■□□□□ 0.57
LSM12-202ENST00000585388 ZBTB10Q96DT7 871 aa18.64■□□□□ 0.57
LSM12-202ENST00000585388 PABPC5Q96DU9 382 aaKnown RBP18.64■□□□□ 0.57
LSM12-202ENST00000585388 AGO3Q9H9G7 860 aaKnown RBP18.64■□□□□ 0.57
LSM12-202ENST00000585388 TMEM260Q9NX78 707 aa18.64■□□□□ 0.57
LSM12-202ENST00000585388 FAM50BQ9Y247 325 aa18.64■□□□□ 0.57
LSM12-202ENST00000585388 KDM3AQ9Y4C1 1321 aa18.64■□□□□ 0.57
LSM12-202ENST00000585388 COL1A2P08123 1366 aa18.64■□□□□ 0.57
LSM12-202ENST00000585388 NID2Q14112 1375 aa18.64■□□□□ 0.57
LSM12-202ENST00000585388 KIAA1671Q9BY89 1806 aa18.63■□□□□ 0.57
LSM12-202ENST00000585388 IGKV6D-21A0A0A0MT36 114 aa18.63■□□□□ 0.57
LSM12-202ENST00000585388 BACH1O14867 736 aa18.63■□□□□ 0.57
LSM12-202ENST00000585388 HBP1O60381 514 aa18.63■□□□□ 0.57
LSM12-202ENST00000585388 DGKIO75912 1065 aa18.63■□□□□ 0.57
LSM12-202ENST00000585388 SETQ01105 290 aaPredicted RBP18.63■□□□□ 0.57
LSM12-202ENST00000585388 COL19A1Q14993 1142 aa18.63■□□□□ 0.57
LSM12-202ENST00000585388 PLA2G4DQ86XP0 818 aa18.63■□□□□ 0.57
LSM12-202ENST00000585388 NPAS4Q8IUM7 802 aa18.63■□□□□ 0.57
LSM12-202ENST00000585388 FAM178BQ8IXR5 827 aa18.63■□□□□ 0.57
LSM12-202ENST00000585388 NEK9Q8TD19 979 aa18.63■□□□□ 0.57
LSM12-202ENST00000585388 LINC01599Q8WXQ3 324 aa18.63■□□□□ 0.57
LSM12-202ENST00000585388 CELF4Q9BZC1 486 aaKnown RBP18.63■□□□□ 0.57
LSM12-202ENST00000585388 TCEAL9Q9UHQ7 104 aa18.63■□□□□ 0.57
LSM12-202ENST00000585388 PADI3Q9ULW8 664 aa18.63■□□□□ 0.57
LSM12-202ENST00000585388 DDX39AO00148 427 aaKnown RBP18.62■□□□□ 0.57
LSM12-202ENST00000585388 NCK2O43639 380 aa18.62■□□□□ 0.57
LSM12-202ENST00000585388 CCNE2O96020 404 aa18.62■□□□□ 0.57
LSM12-202ENST00000585388 CYP3A4P08684 503 aa18.62■□□□□ 0.57
LSM12-202ENST00000585388 LINC00271P0C7V0 271 aa18.62■□□□□ 0.57
LSM12-202ENST00000585388 STAG3L1P0CL83 205 aa18.62■□□□□ 0.57
LSM12-202ENST00000585388 ADD1P35611 737 aaKnown RBP18.62■□□□□ 0.57
LSM12-202ENST00000585388 KRT76Q01546 638 aa18.62■□□□□ 0.57
LSM12-202ENST00000585388 TMEM62Q0P6H9 643 aa18.62■□□□□ 0.57
LSM12-202ENST00000585388 JAKMIP3Q5VZ66 844 aa18.62■□□□□ 0.57
LSM12-202ENST00000585388 MIS18BP1Q6P0N0 1132 aa18.62■□□□□ 0.57
LSM12-202ENST00000585388 MTHFD1LQ6UB35 978 aa18.62■□□□□ 0.57
LSM12-202ENST00000585388 ABHD15Q6UXT9 468 aa18.62■□□□□ 0.57
LSM12-202ENST00000585388 CMTR2Q8IYT2 770 aaKnown RBP18.62■□□□□ 0.57
LSM12-202ENST00000585388 REXO1Q8N1G1 1221 aaKnown RBP18.62■□□□□ 0.57
LSM12-202ENST00000585388 ATP8B4Q8TF62 1192 aa18.62■□□□□ 0.57
LSM12-202ENST00000585388 JAKMIP1Q96N16 626 aaKnown RBP18.62■□□□□ 0.57
LSM12-202ENST00000585388 PLVAPQ9BX97 442 aa18.62■□□□□ 0.57
LSM12-202ENST00000585388 ZMYND12Q9H0C1 365 aa18.62■□□□□ 0.57
LSM12-202ENST00000585388 C6orf50Q9HD87 102 aa18.62■□□□□ 0.57
LSM12-202ENST00000585388 MYH9P35579 1960 aaKnown RBP18.61■□□□□ 0.57
LSM12-202ENST00000585388 IGLV3-22A0A075B6J6 115 aa18.61■□□□□ 0.57
LSM12-202ENST00000585388 GRXCR2A6NFK2 248 aa18.61■□□□□ 0.57
LSM12-202ENST00000585388 FAM86B1E9PN63 330 aa18.61■□□□□ 0.57
LSM12-202ENST00000585388 H3BQ06 376 aaPredicted RBP18.61■□□□□ 0.57
LSM12-202ENST00000585388 IPO5O00410 1097 aaKnown RBP18.61■□□□□ 0.57
LSM12-202ENST00000585388 FAM86B2P0C5J1 330 aa18.61■□□□□ 0.57
LSM12-202ENST00000585388 APOBRQ0VD83 1088 aa18.61■□□□□ 0.57
LSM12-202ENST00000585388 TMEM31Q5JXX7 168 aa18.61■□□□□ 0.57
LSM12-202ENST00000585388 PDXDC2PQ6P474 469 aa18.61■□□□□ 0.57
LSM12-202ENST00000585388 BLOC1S2Q6QNY1 142 aa18.61■□□□□ 0.57
LSM12-202ENST00000585388 EP400NLQ6ZTU2 488 aa18.61■□□□□ 0.57
LSM12-202ENST00000585388 CCDC60Q8IWA6 550 aaPredicted RBP18.61■□□□□ 0.57
LSM12-202ENST00000585388 GJD3Q8N144 294 aa18.61■□□□□ 0.57
LSM12-202ENST00000585388 CRYGNQ8WXF5 182 aa18.61■□□□□ 0.57
LSM12-202ENST00000585388 KCNB2Q92953 911 aa18.61■□□□□ 0.57
LSM12-202ENST00000585388 BRF1Q92994 677 aa18.61■□□□□ 0.57
LSM12-202ENST00000585388 EPHX3Q9H6B9 360 aa18.61■□□□□ 0.57
LSM12-202ENST00000585388 ZNF302Q9NR11 478 aa18.61■□□□□ 0.57
LSM12-202ENST00000585388 TBC1D22BQ9NU19 505 aa18.61■□□□□ 0.57
LSM12-202ENST00000585388 GRM6O15303 877 aa18.6■□□□□ 0.57
LSM12-202ENST00000585388 MMP1P03956 469 aa18.6■□□□□ 0.57
LSM12-202ENST00000585388 IL9P15248 144 aa18.6■□□□□ 0.57
LSM12-202ENST00000585388 KLRC1P26715 233 aa18.6■□□□□ 0.57
LSM12-202ENST00000585388 GNA11P29992 359 aa18.6■□□□□ 0.57
LSM12-202ENST00000585388 SSTR3P32745 418 aaPredicted RBP18.6■□□□□ 0.57
LSM12-202ENST00000585388 AKAP17AQ02040 695 aaKnown RBP18.6■□□□□ 0.57
LSM12-202ENST00000585388 ZNF484Q5JVG2 852 aa18.6■□□□□ 0.57
LSM12-202ENST00000585388 ODR4Q5SWX8 454 aa18.6■□□□□ 0.57
LSM12-202ENST00000585388 Q6ZUG5 572 aa18.6■□□□□ 0.57
LSM12-202ENST00000585388 CCDC148Q8NFR7 591 aa18.6■□□□□ 0.57
LSM12-202ENST00000585388 P2RX5Q93086 422 aa18.6■□□□□ 0.57
LSM12-202ENST00000585388 ZNF577Q9BSK1 485 aa18.6■□□□□ 0.57
LSM12-202ENST00000585388 RNF216Q9NWF9 866 aaPredicted RBP18.6■□□□□ 0.57
LSM12-202ENST00000585388 CLDND1Q9NY35 253 aa18.6■□□□□ 0.57
LSM12-202ENST00000585388 RAPGEFL1Q9UHV5 662 aa18.6■□□□□ 0.57
LSM12-202ENST00000585388 PRPF3O43395 683 aaKnown RBP18.59■□□□□ 0.57
LSM12-202ENST00000585388 CPA1P15085 419 aa18.59■□□□□ 0.57
LSM12-202ENST00000585388 HSPA4P34932 840 aa18.59■□□□□ 0.57
LSM12-202ENST00000585388 NAALADL2Q58DX5 795 aa18.59■□□□□ 0.57
LSM12-202ENST00000585388 ZNF746Q6NUN9 644 aaPredicted RBP18.59■□□□□ 0.57
LSM12-202ENST00000585388 CKAP2LQ8IYA6 745 aa18.59■□□□□ 0.57
LSM12-202ENST00000585388 SMAP1Q8IYB5 467 aaPredicted RBP18.59■□□□□ 0.57
LSM12-202ENST00000585388 CRIPAKQ8N1N5 446 aa18.59■□□□□ 0.57
LSM12-202ENST00000585388 FBXL16Q8N461 479 aa18.59■□□□□ 0.57
LSM12-202ENST00000585388 BICD2Q8TD16 824 aa18.59■□□□□ 0.57
LSM12-202ENST00000585388 PPP2R3CQ969Q6 453 aa18.59■□□□□ 0.57
LSM12-202ENST00000585388 CD320Q9NPF0 282 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms