RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 GTF2F1P35269 517 aaKnown RBP eCLIP17.85■□□□□ 0.451e-8■■■■■ 31.9
SKA2-209ENST00000583976 RBM25P49756 843 aaKnown RBP17.85■□□□□ 0.45
SKA2-209ENST00000583976 GATMP50440 423 aa17.85■□□□□ 0.45
SKA2-209ENST00000583976 NEK4P51957 841 aa17.85■□□□□ 0.45
SKA2-209ENST00000583976 NAPAP54920 295 aa17.85■□□□□ 0.45
SKA2-209ENST00000583976 ACTR2P61160 394 aa17.85■□□□□ 0.45
SKA2-209ENST00000583976 DLX2Q07687 328 aaPredicted RBP17.85■□□□□ 0.45
SKA2-209ENST00000583976 RSPH3Q86UC2 560 aa17.85■□□□□ 0.45
SKA2-209ENST00000583976 MXRA8Q9BRK3 442 aa17.85■□□□□ 0.45
SKA2-209ENST00000583976 ANO3Q9BYT9 981 aa17.85■□□□□ 0.45
SKA2-209ENST00000583976 AGXT2Q9BYV1 514 aa17.85■□□□□ 0.45
SKA2-209ENST00000583976 SLC9A2Q9UBY0 812 aa17.85■□□□□ 0.45
SKA2-209ENST00000583976 HCN4Q9Y3Q4 1203 aa17.85■□□□□ 0.45
SKA2-209ENST00000583976 MRPL42Q9Y6G3 142 aaKnown RBP17.85■□□□□ 0.45
SKA2-209ENST00000583976 PLXNA4Q9HCM2 1894 aa17.84■□□□□ 0.45
SKA2-209ENST00000583976 GOLGA8AA7E2F4 631 aa17.84■□□□□ 0.45
SKA2-209ENST00000583976 GOLGA8BA8MQT2 603 aa17.84■□□□□ 0.45
SKA2-209ENST00000583976 PI4K2BG5E9Z4 385 aa17.84■□□□□ 0.45
SKA2-209ENST00000583976 DDX39AO00148 427 aaKnown RBP17.84■□□□□ 0.45
SKA2-209ENST00000583976 STXBP3O00186 592 aa17.84■□□□□ 0.45
SKA2-209ENST00000583976 ENPP3O14638 875 aa17.84■□□□□ 0.45
SKA2-209ENST00000583976 TBX10O75333 385 aa17.84■□□□□ 0.45
SKA2-209ENST00000583976 IBSPP21815 317 aaPredicted RBP17.84■□□□□ 0.45
SKA2-209ENST00000583976 FUT2Q10981 343 aa17.84■□□□□ 0.45
SKA2-209ENST00000583976 HYAL1Q12794 435 aa17.84■□□□□ 0.45
SKA2-209ENST00000583976 BTG3Q14201 252 aaPredicted RBP17.84■□□□□ 0.45
SKA2-209ENST00000583976 PLCB4Q15147 1175 aa17.84■□□□□ 0.45
SKA2-209ENST00000583976 PAN2Q504Q3 1202 aaKnown RBP17.84■□□□□ 0.45
SKA2-209ENST00000583976 FBXL16Q8N461 479 aa17.84■□□□□ 0.45
SKA2-209ENST00000583976 ZNF689Q96CS4 500 aaPredicted RBP17.84■□□□□ 0.45
SKA2-209ENST00000583976 UIMC1Q96RL1 719 aa17.84■□□□□ 0.45
SKA2-209ENST00000583976 C11orf84Q9BUA3 381 aaPredicted RBP17.84■□□□□ 0.45
SKA2-209ENST00000583976 TRPV2Q9Y5S1 764 aa17.84■□□□□ 0.45
SKA2-209ENST00000583976 WDFY4Q6ZS81 3184 aa17.83■□□□□ 0.45
SKA2-209ENST00000583976 ADAMTS3O15072 1205 aa17.83■□□□□ 0.44
SKA2-209ENST00000583976 LINC01565O15544 149 aa17.83■□□□□ 0.44
SKA2-209ENST00000583976 GPR37L1O60883 481 aa17.83■□□□□ 0.44
SKA2-209ENST00000583976 DGKIO75912 1065 aa17.83■□□□□ 0.44
SKA2-209ENST00000583976 CCNE2O96020 404 aa17.83■□□□□ 0.44
SKA2-209ENST00000583976 BMPR1AP36894 532 aa17.83■□□□□ 0.44
SKA2-209ENST00000583976 LTBRP36941 435 aa17.83■□□□□ 0.44
SKA2-209ENST00000583976 METAP2P50579 478 aaKnown RBP eCLIP17.83■□□□□ 0.44
SKA2-209ENST00000583976 AK2P54819 239 aa17.83■□□□□ 0.44
SKA2-209ENST00000583976 ZP2Q05996 745 aa17.83■□□□□ 0.44
SKA2-209ENST00000583976 RTN1Q16799 776 aa17.83■□□□□ 0.44
SKA2-209ENST00000583976 TMEM266Q2M3C6 531 aa17.83■□□□□ 0.44
SKA2-209ENST00000583976 CLP1Q92989 425 aaKnown RBP17.83■□□□□ 0.44
SKA2-209ENST00000583976 KIF2CQ99661 725 aa17.83■□□□□ 0.44
SKA2-209ENST00000583976 AGO4Q9HCK5 861 aaKnown RBP17.83■□□□□ 0.44
SKA2-209ENST00000583976 ALG13Q9NP73 1137 aaKnown RBP17.83■□□□□ 0.44
SKA2-209ENST00000583976 MUC6Q6W4X9 2439 aa17.83■□□□□ 0.44
SKA2-209ENST00000583976 TRIOO75962 3097 aa17.83■□□□□ 0.44
SKA2-209ENST00000583976 NFASCO94856 1347 aa17.82■□□□□ 0.44
SKA2-209ENST00000583976 POTEB3A0JP26 581 aa17.82■□□□□ 0.44
SKA2-209ENST00000583976 MMP1P03956 469 aa17.82■□□□□ 0.44
SKA2-209ENST00000583976 ADCY7P51828 1080 aa17.82■□□□□ 0.44
SKA2-209ENST00000583976 CCT2P78371 535 aaKnown RBP17.82■□□□□ 0.44
SKA2-209ENST00000583976 STK3Q13188 491 aa17.82■□□□□ 0.44
SKA2-209ENST00000583976 PPP1R18Q6NYC8 613 aa17.82■□□□□ 0.44
SKA2-209ENST00000583976 POTEBQ6S5H4 581 aa17.82■□□□□ 0.44
SKA2-209ENST00000583976 RTN4RL1Q86UN2 441 aaPredicted RBP17.82■□□□□ 0.44
SKA2-209ENST00000583976 SDF4Q9BRK5 362 aa17.82■□□□□ 0.44
SKA2-209ENST00000583976 TMX1Q9H3N1 280 aa17.82■□□□□ 0.44
SKA2-209ENST00000583976 AZI2Q9H6S1 392 aa17.82■□□□□ 0.44
SKA2-209ENST00000583976 RIC8AQ9NPQ8 531 aa17.82■□□□□ 0.44
SKA2-209ENST00000583976 IGSF9BQ9UPX0 1349 aa17.81■□□□□ 0.44
SKA2-209ENST00000583976 DNAJB1P25685 340 aa17.81■□□□□ 0.44
SKA2-209ENST00000583976 PDIA3P30101 505 aaKnown RBP17.81■□□□□ 0.44
SKA2-209ENST00000583976 CDC27P30260 824 aa17.81■□□□□ 0.44
SKA2-209ENST00000583976 ADD1P35611 737 aaKnown RBP17.81■□□□□ 0.44
SKA2-209ENST00000583976 PAK2Q13177 524 aa17.81■□□□□ 0.44
SKA2-209ENST00000583976 CAMK1Q14012 370 aa17.81■□□□□ 0.44
SKA2-209ENST00000583976 ADGRD2Q7Z7M1 963 aa17.81■□□□□ 0.44
SKA2-209ENST00000583976 CRIPAKQ8N1N5 446 aa17.81■□□□□ 0.44
SKA2-209ENST00000583976 TBC1D32Q96NH3 1257 aa17.81■□□□□ 0.44
SKA2-209ENST00000583976 PPP1R16BQ96T49 567 aa17.81■□□□□ 0.44
SKA2-209ENST00000583976 RBM28Q9NW13 759 aaKnown RBP17.81■□□□□ 0.44
SKA2-209ENST00000583976 PADI3Q9ULW8 664 aa17.81■□□□□ 0.44
SKA2-209ENST00000583976 PCDHGC5Q9Y5F6 944 aa17.81■□□□□ 0.44
SKA2-209ENST00000583976 RRN3P2A6NIE6 340 aa17.8■□□□□ 0.44
SKA2-209ENST00000583976 IRS1P35568 1242 aa17.8■□□□□ 0.44
SKA2-209ENST00000583976 SREBF1P36956 1147 aa17.8■□□□□ 0.44
SKA2-209ENST00000583976 STAT5BP51692 787 aa17.8■□□□□ 0.44
SKA2-209ENST00000583976 CTC1Q2NKJ3 1217 aa17.8■□□□□ 0.44
SKA2-209ENST00000583976 CEP55Q53EZ4 464 aa17.8■□□□□ 0.44
SKA2-209ENST00000583976 NPAS4Q8IUM7 802 aa17.8■□□□□ 0.44
SKA2-209ENST00000583976 CCDC60Q8IWA6 550 aaPredicted RBP17.8■□□□□ 0.44
SKA2-209ENST00000583976 TMEM40Q8WWA1 233 aa17.8■□□□□ 0.44
SKA2-209ENST00000583976 LMAN2LQ9H0V9 348 aa17.8■□□□□ 0.44
SKA2-209ENST00000583976 NCOA5Q9HCD5 579 aaKnown RBP17.8■□□□□ 0.44
SKA2-209ENST00000583976 FAM217BQ9NTX9 383 aaPredicted RBP17.8■□□□□ 0.44
SKA2-209ENST00000583976 HCSTQ9UBK5 93 aa17.8■□□□□ 0.44
SKA2-209ENST00000583976 PCDHA2Q9Y5H9 948 aa17.8■□□□□ 0.44
SKA2-209ENST00000583976 FNDC1Q4ZHG4 1894 aaPredicted RBP17.8■□□□□ 0.44
SKA2-209ENST00000583976 FAM86B1E9PN63 330 aa17.79■□□□□ 0.44
SKA2-209ENST00000583976 M0QZ92 97 aa17.79■□□□□ 0.44
SKA2-209ENST00000583976 MGEA5O60502 916 aa17.79■□□□□ 0.44
SKA2-209ENST00000583976 ITGB1P05556 798 aa17.79■□□□□ 0.44
SKA2-209ENST00000583976 RB1P06400 928 aa17.79■□□□□ 0.44
SKA2-209ENST00000583976 FAM86B2P0C5J1 330 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms