RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 KARSQ15046 597 aaKnown RBP12.26□□□□□ -0.45
TOP3A-216ENST00000583804 UGCGQ16739 394 aa12.26□□□□□ -0.45
TOP3A-216ENST00000583804 CCSAPQ6IQ19 270 aaPredicted RBP12.26□□□□□ -0.45
TOP3A-216ENST00000583804 PLPPR4Q7Z2D5 763 aa12.26□□□□□ -0.45
TOP3A-216ENST00000583804 CATSPER3Q86XQ3 398 aa12.26□□□□□ -0.45
TOP3A-216ENST00000583804 NEK9Q8TD19 979 aa12.26□□□□□ -0.45
TOP3A-216ENST00000583804 ERCC4Q92889 916 aaPredicted RBP12.26□□□□□ -0.45
TOP3A-216ENST00000583804 DHX58Q96C10 678 aa12.26□□□□□ -0.45
TOP3A-216ENST00000583804 CALML4Q96GE6 196 aa12.26□□□□□ -0.45
TOP3A-216ENST00000583804 ABHD8Q96I13 439 aa12.26□□□□□ -0.45
TOP3A-216ENST00000583804 LXNQ9BS40 222 aa12.26□□□□□ -0.45
TOP3A-216ENST00000583804 TSEN34Q9BSV6 310 aaKnown RBP12.26□□□□□ -0.45
TOP3A-216ENST00000583804 MMTAG2Q9BU76 263 aaKnown RBP12.26□□□□□ -0.45
TOP3A-216ENST00000583804 POLR3CQ9BUI4 534 aaPredicted RBP12.26□□□□□ -0.45
TOP3A-216ENST00000583804 ZSWIM4Q9H7M6 989 aa12.26□□□□□ -0.45
TOP3A-216ENST00000583804 TUFT1Q9NNX1 390 aa12.26□□□□□ -0.45
TOP3A-216ENST00000583804 FAM13BQ9NYF5 915 aa12.26□□□□□ -0.45
TOP3A-216ENST00000583804 ERAP1Q9NZ08 941 aa12.26□□□□□ -0.45
TOP3A-216ENST00000583804 KIAA1024Q9UPX6 916 aa12.26□□□□□ -0.45
TOP3A-216ENST00000583804 A0A087WWV3 80 aa12.25□□□□□ -0.45
TOP3A-216ENST00000583804 A0A087X0B3 334 aa12.25□□□□□ -0.45
TOP3A-216ENST00000583804 POTEB3A0JP26 581 aa12.25□□□□□ -0.45
TOP3A-216ENST00000583804 MOXD2PA6NHM9 499 aa12.25□□□□□ -0.45
TOP3A-216ENST00000583804 POLR2DO15514 142 aaKnown RBP12.25□□□□□ -0.45
TOP3A-216ENST00000583804 SPATA31C1P0DKV0 1188 aa12.25□□□□□ -0.45
TOP3A-216ENST00000583804 CMA1P23946 247 aa12.25□□□□□ -0.45
TOP3A-216ENST00000583804 SYKP43405 635 aa12.25□□□□□ -0.45
TOP3A-216ENST00000583804 PSEN2P49810 448 aa12.25□□□□□ -0.45
TOP3A-216ENST00000583804 KLHL40Q2TBA0 621 aa12.25□□□□□ -0.45
TOP3A-216ENST00000583804 SKOR2Q2VWA4 1001 aaPredicted RBP12.25□□□□□ -0.45
TOP3A-216ENST00000583804 POTEBQ6S5H4 581 aa12.25□□□□□ -0.45
TOP3A-216ENST00000583804 GRAMD1CQ8IYS0 662 aa12.25□□□□□ -0.45
TOP3A-216ENST00000583804 AFAP1L1Q8TED9 768 aa12.25□□□□□ -0.45
TOP3A-216ENST00000583804 PPP1R13LQ8WUF5 828 aa12.25□□□□□ -0.45
TOP3A-216ENST00000583804 GLT1D1Q96MS3 346 aa12.25□□□□□ -0.45
TOP3A-216ENST00000583804 KATNAL1Q9BW62 490 aa12.25□□□□□ -0.45
TOP3A-216ENST00000583804 CCSER1Q9C0I3 900 aa12.25□□□□□ -0.45
TOP3A-216ENST00000583804 CCDC39Q9UFE4 941 aa12.25□□□□□ -0.45
TOP3A-216ENST00000583804 TRPC6Q9Y210 931 aa12.25□□□□□ -0.45
TOP3A-216ENST00000583804 MAFBQ9Y5Q3 323 aaPredicted RBP12.25□□□□□ -0.45
TOP3A-216ENST00000583804 CCDC85CA6NKD9 419 aa12.24□□□□□ -0.45
TOP3A-216ENST00000583804 ZNF862O60290 1169 aa12.24□□□□□ -0.45
TOP3A-216ENST00000583804 KINO60870 393 aaKnown RBP12.24□□□□□ -0.45
TOP3A-216ENST00000583804 CABYRO75952 493 aa12.24□□□□□ -0.45
TOP3A-216ENST00000583804 F2P00734 622 aa12.24□□□□□ -0.45
TOP3A-216ENST00000583804 EN2P19622 333 aaPredicted RBP12.24□□□□□ -0.45
TOP3A-216ENST00000583804 ATP4AP20648 1035 aa12.24□□□□□ -0.45
TOP3A-216ENST00000583804 SLC26A2P50443 739 aa12.24□□□□□ -0.45
TOP3A-216ENST00000583804 PSMC6P62333 389 aa12.24□□□□□ -0.45
TOP3A-216ENST00000583804 PRKCEQ02156 737 aa12.24□□□□□ -0.45
TOP3A-216ENST00000583804 MFSD10Q14728 455 aa12.24□□□□□ -0.45
TOP3A-216ENST00000583804 PLCB4Q15147 1175 aa12.24□□□□□ -0.45
TOP3A-216ENST00000583804 ECM1Q16610 540 aa12.24□□□□□ -0.45
TOP3A-216ENST00000583804 KIAA0753Q2KHM9 967 aa12.24□□□□□ -0.45
TOP3A-216ENST00000583804 POTEGQ6S5H5 508 aa12.24□□□□□ -0.45
TOP3A-216ENST00000583804 KAT2BQ92831 832 aa12.24□□□□□ -0.45
TOP3A-216ENST00000583804 RNPEPQ9H4A4 650 aa12.24□□□□□ -0.45
TOP3A-216ENST00000583804 NRBP2Q9NSY0 501 aa12.24□□□□□ -0.45
TOP3A-216ENST00000583804 DDX19AQ9NUU7 478 aaKnown RBP12.24□□□□□ -0.45
TOP3A-216ENST00000583804 WRAP73Q9P2S5 460 aaPredicted RBP12.24□□□□□ -0.45
TOP3A-216ENST00000583804 SEPT9Q9UHD8 586 aaPredicted RBP12.24□□□□□ -0.45
TOP3A-216ENST00000583804 KCNH3Q9ULD8 1083 aa12.24□□□□□ -0.45
TOP3A-216ENST00000583804 PHF24Q9UPV7 400 aa12.24□□□□□ -0.45
TOP3A-216ENST00000583804 IGSF9BQ9UPX0 1349 aa12.24□□□□□ -0.45
TOP3A-216ENST00000583804 KDM3AQ9Y4C1 1321 aa12.24□□□□□ -0.45
TOP3A-216ENST00000583804 A0A1W2PQ45 241 aaPredicted RBP12.23□□□□□ -0.45
TOP3A-216ENST00000583804 A0A1W2PQY0 241 aa12.23□□□□□ -0.45
TOP3A-216ENST00000583804 FSD2A1L4K1 749 aa12.23□□□□□ -0.45
TOP3A-216ENST00000583804 ZBTB39O15060 712 aa12.23□□□□□ -0.45
TOP3A-216ENST00000583804 OATP04181 439 aa12.23□□□□□ -0.45
TOP3A-216ENST00000583804 CAPN2P17655 700 aa12.23□□□□□ -0.45
TOP3A-216ENST00000583804 YWHABP31946 246 aaKnown RBP12.23□□□□□ -0.45
TOP3A-216ENST00000583804 FAM160A1Q05DH4 1040 aa12.23□□□□□ -0.45
TOP3A-216ENST00000583804 SNW1Q13573 536 aaKnown RBP12.23□□□□□ -0.45
TOP3A-216ENST00000583804 DHX8Q14562 1220 aaKnown RBP12.23□□□□□ -0.45
TOP3A-216ENST00000583804 NBPF20Q3BBV1 942 aa12.23□□□□□ -0.45
TOP3A-216ENST00000583804 XKR3Q5GH77 459 aa12.23□□□□□ -0.45
TOP3A-216ENST00000583804 FAM47CQ5HY64 1035 aa12.23□□□□□ -0.45
TOP3A-216ENST00000583804 RRAGBQ5VZM2 374 aa12.23□□□□□ -0.45
TOP3A-216ENST00000583804 C4orf19Q8IY42 314 aa12.23□□□□□ -0.45
TOP3A-216ENST00000583804 FMR1NBQ8N0W7 255 aaPredicted RBP12.23□□□□□ -0.45
TOP3A-216ENST00000583804 C7orf31Q8N865 590 aa12.23□□□□□ -0.45
TOP3A-216ENST00000583804 ANKLE1Q8NAG6 615 aa12.23□□□□□ -0.45
TOP3A-216ENST00000583804 PIGOQ8TEQ8 1089 aa12.23□□□□□ -0.45
TOP3A-216ENST00000583804 ATP8B4Q8TF62 1192 aa12.23□□□□□ -0.45
TOP3A-216ENST00000583804 STAMQ92783 540 aa12.23□□□□□ -0.45
TOP3A-216ENST00000583804 FAM167AQ96KS9 214 aa12.23□□□□□ -0.45
TOP3A-216ENST00000583804 CCDC43Q96MW1 224 aaKnown RBP12.23□□□□□ -0.45
TOP3A-216ENST00000583804 PNMA5Q96PV4 448 aa12.23□□□□□ -0.45
TOP3A-216ENST00000583804 NACC1Q96RE7 527 aa12.23□□□□□ -0.45
TOP3A-216ENST00000583804 SENP6Q9GZR1 1112 aaPredicted RBP12.23□□□□□ -0.45
TOP3A-216ENST00000583804 NT5C3AQ9H0P0 336 aa12.23□□□□□ -0.45
TOP3A-216ENST00000583804 STARD7Q9NQZ5 370 aa12.23□□□□□ -0.45
TOP3A-216ENST00000583804 SERTAD1Q9UHV2 236 aa12.23□□□□□ -0.45
TOP3A-216ENST00000583804 TMEM150BA6NC51 233 aa12.22□□□□□ -0.45
TOP3A-216ENST00000583804 HAS3O00219 553 aa12.22□□□□□ -0.45
TOP3A-216ENST00000583804 SLC26A4O43511 780 aa12.22□□□□□ -0.45
TOP3A-216ENST00000583804 HBP1O60381 514 aa12.22□□□□□ -0.45
TOP3A-216ENST00000583804 ZNF202O95125 648 aa12.22□□□□□ -0.45
TOP3A-216ENST00000583804 PLCG1P19174 1290 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms