RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 HAND2P61296 217 aa11.84□□□□□ -0.51
SS18-221ENST00000582448 FPGSQ05932 587 aa11.84□□□□□ -0.51
SS18-221ENST00000582448 GABPAQ06546 454 aa11.84□□□□□ -0.51
SS18-221ENST00000582448 PCSK7Q16549 785 aa11.84□□□□□ -0.51
SS18-221ENST00000582448 AMOTL1Q8IY63 956 aa11.84□□□□□ -0.51
SS18-221ENST00000582448 LCORLQ8N3X6 602 aa11.84□□□□□ -0.51
SS18-221ENST00000582448 USP38Q8NB14 1042 aa11.84□□□□□ -0.51
SS18-221ENST00000582448 LENG1Q96BZ8 264 aaPredicted RBP11.84□□□□□ -0.51
SS18-221ENST00000582448 RIOK1Q9BRS2 568 aaKnown RBP11.84□□□□□ -0.51
SS18-221ENST00000582448 KRT23Q9C075 422 aa11.84□□□□□ -0.51
SS18-221ENST00000582448 KIF3AQ9Y496 699 aa11.84□□□□□ -0.51
SS18-221ENST00000582448 MAST2Q6P0Q8 1798 aa11.84□□□□□ -0.51
SS18-221ENST00000582448 LAMA2P24043 3122 aaKnown RBP11.84□□□□□ -0.51
SS18-221ENST00000582448 MYH1P12882 1939 aa11.84□□□□□ -0.51
SS18-221ENST00000582448 WDR19Q8NEZ3 1342 aa11.84□□□□□ -0.51
SS18-221ENST00000582448 FRMPD3Q5JV73 1810 aa11.83□□□□□ -0.51
SS18-221ENST00000582448 MYO5AQ9Y4I1 1855 aaKnown RBP11.83□□□□□ -0.52
SS18-221ENST00000582448 A0A1W2PQ45 241 aaPredicted RBP11.83□□□□□ -0.52
SS18-221ENST00000582448 A0A1W2PQY0 241 aa11.83□□□□□ -0.52
SS18-221ENST00000582448 SPDYE3A6NKU9 549 aa11.83□□□□□ -0.52
SS18-221ENST00000582448 J3QW42 95 aa11.83□□□□□ -0.52
SS18-221ENST00000582448 SLC25A27O95847 323 aa11.83□□□□□ -0.52
SS18-221ENST00000582448 AKR1B1P15121 316 aa11.83□□□□□ -0.52
SS18-221ENST00000582448 PDCP20941 246 aa11.83□□□□□ -0.52
SS18-221ENST00000582448 TMEM132BQ14DG7 1078 aa11.83□□□□□ -0.52
SS18-221ENST00000582448 GIMAP6Q6P9H5 292 aa11.83□□□□□ -0.52
SS18-221ENST00000582448 MFSD6Q6ZSS7 791 aa11.83□□□□□ -0.52
SS18-221ENST00000582448 TMEM179Q6ZVK1 233 aa11.83□□□□□ -0.52
SS18-221ENST00000582448 CCDC83Q8IWF9 413 aa11.83□□□□□ -0.52
SS18-221ENST00000582448 ABRAQ8N0Z2 381 aa11.83□□□□□ -0.52
SS18-221ENST00000582448 ZNF576Q9H609 170 aa11.83□□□□□ -0.52
SS18-221ENST00000582448 FAM13BQ9NYF5 915 aa11.83□□□□□ -0.52
SS18-221ENST00000582448 CDK5RAP2Q96SN8 1893 aa11.83□□□□□ -0.52
SS18-221ENST00000582448 VCANP13611 3396 aa11.82□□□□□ -0.52
SS18-221ENST00000582448 EYSQ5T1H1 3165 aa11.82□□□□□ -0.52
SS18-221ENST00000582448 GSG1L2A8MUP6 293 aa11.82□□□□□ -0.52
SS18-221ENST00000582448 DCDC2CA8MYV0 355 aa11.82□□□□□ -0.52
SS18-221ENST00000582448 KIAA0355O15063 1070 aa11.82□□□□□ -0.52
SS18-221ENST00000582448 PRC1O43663 620 aa11.82□□□□□ -0.52
SS18-221ENST00000582448 DHX16O60231 1041 aaKnown RBP11.82□□□□□ -0.52
SS18-221ENST00000582448 EXOSC10Q01780 885 aaKnown RBP11.82□□□□□ -0.52
SS18-221ENST00000582448 ICA1Q05084 483 aa11.82□□□□□ -0.52
SS18-221ENST00000582448 MTMR3Q13615 1198 aa11.82□□□□□ -0.52
SS18-221ENST00000582448 KCTD2Q14681 263 aa11.82□□□□□ -0.52
SS18-221ENST00000582448 SART3Q15020 963 aaKnown RBP11.82□□□□□ -0.52
SS18-221ENST00000582448 PRRT3Q5FWE3 981 aa11.82□□□□□ -0.52
SS18-221ENST00000582448 STOX1Q6ZVD7 989 aa11.82□□□□□ -0.52
SS18-221ENST00000582448 SIAH1Q8IUQ4 282 aa11.82□□□□□ -0.52
SS18-221ENST00000582448 BRF1Q92994 677 aa11.82□□□□□ -0.52
SS18-221ENST00000582448 TIFAQ96CG3 184 aa11.82□□□□□ -0.52
SS18-221ENST00000582448 TCEANC2Q96MN5 208 aa11.82□□□□□ -0.52
SS18-221ENST00000582448 TINF2Q9BSI4 451 aa11.82□□□□□ -0.52
SS18-221ENST00000582448 VCPKMTQ9H867 229 aa11.82□□□□□ -0.52
SS18-221ENST00000582448 STARD7Q9NQZ5 370 aa11.82□□□□□ -0.52
SS18-221ENST00000582448 TOMM22Q9NS69 142 aa11.82□□□□□ -0.52
SS18-221ENST00000582448 ATP8A2Q9NTI2 1148 aa11.82□□□□□ -0.52
SS18-221ENST00000582448 FBXO28Q9NVF7 368 aa11.82□□□□□ -0.52
SS18-221ENST00000582448 TPCN1Q9ULQ1 816 aa11.82□□□□□ -0.52
SS18-221ENST00000582448 NAP1L2Q9ULW6 460 aaPredicted RBP11.82□□□□□ -0.52
SS18-221ENST00000582448 TMX2Q9Y320 296 aa11.82□□□□□ -0.52
SS18-221ENST00000582448 TAF6LQ9Y6J9 622 aa11.82□□□□□ -0.52
SS18-221ENST00000582448 TMEM265A0A087WTH1 108 aa11.81□□□□□ -0.52
SS18-221ENST00000582448 ERICH2A1L162 156 aa11.81□□□□□ -0.52
SS18-221ENST00000582448 FOXP2O15409 715 aa11.81□□□□□ -0.52
SS18-221ENST00000582448 PRKAB2O43741 272 aa11.81□□□□□ -0.52
SS18-221ENST00000582448 PSAPP07602 524 aa11.81□□□□□ -0.52
SS18-221ENST00000582448 PCP11498 1178 aaKnown RBP11.81□□□□□ -0.52
SS18-221ENST00000582448 AKR1A1P14550 325 aa11.81□□□□□ -0.52
SS18-221ENST00000582448 STAT3P40763 770 aa11.81□□□□□ -0.52
SS18-221ENST00000582448 FAAP100Q0VG06 881 aa11.81□□□□□ -0.52
SS18-221ENST00000582448 TOB2Q14106 344 aaPredicted RBP11.81□□□□□ -0.52
SS18-221ENST00000582448 CCDC85BQ15834 202 aaPredicted RBP11.81□□□□□ -0.52
SS18-221ENST00000582448 ME3Q16798 604 aa11.81□□□□□ -0.52
SS18-221ENST00000582448 AKNAD1Q5T1N1 836 aa11.81□□□□□ -0.52
SS18-221ENST00000582448 ELMSAN1Q6PJG2 1045 aa11.81□□□□□ -0.52
SS18-221ENST00000582448 FBXL16Q8N461 479 aa11.81□□□□□ -0.52
SS18-221ENST00000582448 TNPO1Q92973 898 aaKnown RBP11.81□□□□□ -0.52
SS18-221ENST00000582448 NSUN5Q96P11 429 aaKnown RBP11.81□□□□□ -0.52
SS18-221ENST00000582448 SH2D4AQ9H788 454 aa11.81□□□□□ -0.52
SS18-221ENST00000582448 DCP1AQ9NPI6 582 aaPredicted RBP11.81□□□□□ -0.52
SS18-221ENST00000582448 FRRS1LQ9P0K9 344 aa11.81□□□□□ -0.52
SS18-221ENST00000582448 SWAP70Q9UH65 585 aa11.81□□□□□ -0.52
SS18-221ENST00000582448 RAPGEFL1Q9UHV5 662 aa11.81□□□□□ -0.52
SS18-221ENST00000582448 CNPY2Q9Y2B0 182 aa11.81□□□□□ -0.52
SS18-221ENST00000582448 RLFQ13129 1914 aa11.81□□□□□ -0.52
SS18-221ENST00000582448 LTBP2Q14767 1821 aa11.81□□□□□ -0.52
SS18-221ENST00000582448 FOCADQ5VW36 1801 aa11.81□□□□□ -0.52
SS18-221ENST00000582448 CYP2D7A0A087X1C5 515 aa11.8□□□□□ -0.52
SS18-221ENST00000582448 GRXCR1A8MXD5 290 aa11.8□□□□□ -0.52
SS18-221ENST00000582448 MINDY4BA8MYZ0 360 aa11.8□□□□□ -0.52
SS18-221ENST00000582448 SMIM22K7EJ46 135 aa11.8□□□□□ -0.52
SS18-221ENST00000582448 WDR46O15213 610 aaKnown RBP11.8□□□□□ -0.52
SS18-221ENST00000582448 ZNF865P0CJ78 1059 aaPredicted RBP11.8□□□□□ -0.52
SS18-221ENST00000582448 HOXD8P13378 290 aaPredicted RBP11.8□□□□□ -0.52
SS18-221ENST00000582448 EEF2P13639 858 aaKnown RBP11.8□□□□□ -0.52
SS18-221ENST00000582448 NT5C2P49902 561 aa11.8□□□□□ -0.52
SS18-221ENST00000582448 ACLYP53396 1101 aa11.8□□□□□ -0.52
SS18-221ENST00000582448 PPARAQ07869 468 aa11.8□□□□□ -0.52
SS18-221ENST00000582448 STK3Q13188 491 aa11.8□□□□□ -0.52
SS18-221ENST00000582448 GRIK4Q16099 956 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms