RNA–Protein interactions for RNA: ENST00000581161.5

RTTN-206, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-206ENST00000581161 TP53BP2Q13625 1128 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 PWP2Q15269 919 aaKnown RBP4.6□□□□□ -1.67
RTTN-206ENST00000581161 PUM3Q15397 648 aaKnown RBP4.6□□□□□ -1.67
RTTN-206ENST00000581161 C8orf74Q6P047 294 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 C4orf50Q6ZRC1 276 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 BBS5Q8N3I7 341 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 CSGALNACT2Q8N6G5 542 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 ANKRD13CQ8N6S4 541 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 ZNF579Q8NAF0 562 aaKnown RBP4.6□□□□□ -1.67
RTTN-206ENST00000581161 GALNT8Q9NY28 637 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 NKIRAS1Q9NYS0 192 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 SMARCAL1Q9NZC9 954 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 MAP3K15Q6ZN16 1313 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 TTC26A0AVF1 554 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 GHRP10912 638 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 SLC9A1P19634 815 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 SARSP49591 514 aaKnown RBP4.6□□□□□ -1.67
RTTN-206ENST00000581161 ARL4DP49703 201 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 CORO7P57737 925 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 SLC7A5Q01650 507 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 SEMA3FQ13275 785 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 MMS22LQ6ZRQ5 1243 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 RAB44Q7Z6P3 723 aaPredicted RBP4.6□□□□□ -1.67
RTTN-206ENST00000581161 SGMS1Q86VZ5 419 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 ATP11CQ8NB49 1132 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 RDH13Q8NBN7 331 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 BTN2A2Q8WVV5 523 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 ZNF512BQ96KM6 892 aaPredicted RBP4.6□□□□□ -1.67
RTTN-206ENST00000581161 ZSCAN10Q96SZ4 725 aaPredicted RBP4.6□□□□□ -1.67
RTTN-206ENST00000581161 MYCBPQ99417 103 aaPredicted RBP4.6□□□□□ -1.67
RTTN-206ENST00000581161 EPAS1Q99814 870 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 PDCD10Q9BUL8 212 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 CDCA7Q9BWT1 371 aaPredicted RBP4.6□□□□□ -1.67
RTTN-206ENST00000581161 NHEJ1Q9H9Q4 299 aaPredicted RBP4.6□□□□□ -1.67
RTTN-206ENST00000581161 ATG3Q9NT62 314 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 UTP6Q9NYH9 597 aaKnown RBP4.6□□□□□ -1.67
RTTN-206ENST00000581161 COL11A2P13942 1736 aaPredicted RBP4.6□□□□□ -1.67
RTTN-206ENST00000581161 RLFQ13129 1914 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 CYP2D7A0A087X1C5 515 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.6□□□□□ -1.67
RTTN-206ENST00000581161 A0A0B4J269 797 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 MAGEB6P1A0A0J9YX57 407 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 CCDC78A2IDD5 438 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 RNF225M0QZC1 329 aaPredicted RBP4.6□□□□□ -1.67
RTTN-206ENST00000581161 SNAP23O00161 211 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 NVLO15381 856 aaKnown RBP4.6□□□□□ -1.67
RTTN-206ENST00000581161 NCK2O43639 380 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 BUB1O43683 1085 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 MOCS3O95396 460 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 PCCAP05165 728 aaPredicted RBP4.6□□□□□ -1.67
RTTN-206ENST00000581161 LDHCP07864 332 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 POLR2BP30876 1174 aaKnown RBP4.6□□□□□ -1.67
RTTN-206ENST00000581161 HPDP32754 393 aaPredicted RBP4.6□□□□□ -1.67
RTTN-206ENST00000581161 UBA7P41226 1012 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 GUCY2FP51841 1108 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 IL1RL1Q01638 556 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 MED21Q13503 144 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 TUBB3Q13509 450 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 PLEKHM3Q6ZWE6 761 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 DNAJC10Q8IXB1 793 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 MB21D1Q8N884 522 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 ZSCAN18Q8TBC5 510 aaPredicted RBP4.6□□□□□ -1.67
RTTN-206ENST00000581161 COG1Q8WTW3 980 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 MTBPQ96DY7 904 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 RRP36Q96EU6 259 aaKnown RBP4.6□□□□□ -1.67
RTTN-206ENST00000581161 MLXIPQ9HAP2 919 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 PARVBQ9HBI1 364 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 NEUROD4Q9HD90 331 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 PPANQ9NQ55 473 aaKnown RBP4.6□□□□□ -1.67
RTTN-206ENST00000581161 FAM217BQ9NTX9 383 aaPredicted RBP4.6□□□□□ -1.67
RTTN-206ENST00000581161 TCP11L1Q9NUJ3 509 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 LIMA1Q9UHB6 759 aaKnown RBP4.6□□□□□ -1.67
RTTN-206ENST00000581161 SOX13Q9UN79 622 aa4.6□□□□□ -1.67
RTTN-206ENST00000581161 GOLGA8KD6RF30 607 aa4.59□□□□□ -1.67
RTTN-206ENST00000581161 GSTA4O15217 222 aa4.59□□□□□ -1.67
RTTN-206ENST00000581161 APOEP02649 317 aa4.59□□□□□ -1.67
RTTN-206ENST00000581161 VPS41P49754 854 aa4.59□□□□□ -1.67
RTTN-206ENST00000581161 GSTO1P78417 241 aa4.59□□□□□ -1.67
RTTN-206ENST00000581161 PLS1Q14651 629 aa4.59□□□□□ -1.67
RTTN-206ENST00000581161 ZMYND11Q15326 602 aa4.59□□□□□ -1.67
RTTN-206ENST00000581161 NBPF20Q3BBV1 942 aa4.59□□□□□ -1.67
RTTN-206ENST00000581161 ZNF394Q53GI3 561 aa4.59□□□□□ -1.67
RTTN-206ENST00000581161 FAM47AQ5JRC9 791 aa4.59□□□□□ -1.67
RTTN-206ENST00000581161 CDKAL1Q5VV42 579 aa4.59□□□□□ -1.67
RTTN-206ENST00000581161 MCTP2Q6DN12 878 aa4.59□□□□□ -1.67
RTTN-206ENST00000581161 CNNM4Q6P4Q7 775 aa4.59□□□□□ -1.67
RTTN-206ENST00000581161 ZNF365Q70YC5 407 aa4.59□□□□□ -1.67
RTTN-206ENST00000581161 PALB2Q86YC2 1186 aa4.59□□□□□ -1.67
RTTN-206ENST00000581161 RASGRP4Q8TDF6 673 aa4.59□□□□□ -1.67
RTTN-206ENST00000581161 GPKOWQ92917 476 aaPredicted RBP eCLIP4.59□□□□□ -1.67
RTTN-206ENST00000581161 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.59□□□□□ -1.679e-9■■■■■ 81.1
RTTN-206ENST00000581161 C18orf25Q96B23 403 aaPredicted RBP4.59□□□□□ -1.67
RTTN-206ENST00000581161 LRGUKQ96M69 825 aa4.59□□□□□ -1.67
RTTN-206ENST00000581161 POLR3CQ9BUI4 534 aaPredicted RBP4.59□□□□□ -1.67
RTTN-206ENST00000581161 MMRN2Q9H8L6 949 aa4.59□□□□□ -1.67
RTTN-206ENST00000581161 FAM207AQ9NSI2 230 aaPredicted RBP4.59□□□□□ -1.67
RTTN-206ENST00000581161 TRPC5Q9UL62 973 aaPredicted RBP4.59□□□□□ -1.67
RTTN-206ENST00000581161 THRAP3Q9Y2W1 955 aaKnown RBP4.59□□□□□ -1.67
RTTN-206ENST00000581161 IVNS1ABPQ9Y6Y0 642 aa4.59□□□□□ -1.67
RTTN-206ENST00000581161 A0A0G2JMZ2 1700 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms