RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 POTEBQ6S5H4 581 aa16.49■□□□□ 0.23
SMARCE1-216ENST00000580419 RUFY4Q6ZNE9 571 aa16.49■□□□□ 0.23
SMARCE1-216ENST00000580419 RUFY3Q7L099 469 aa16.49■□□□□ 0.23
SMARCE1-216ENST00000580419 IL27Q8NEV9 243 aa16.49■□□□□ 0.23
SMARCE1-216ENST00000580419 ATP8B4Q8TF62 1192 aa16.49■□□□□ 0.23
SMARCE1-216ENST00000580419 HLA-CQ95604 372 aa16.49■□□□□ 0.23
SMARCE1-216ENST00000580419 MRPL38Q96DV4 380 aaKnown RBP16.49■□□□□ 0.23
SMARCE1-216ENST00000580419 ZNF274Q96GC6 653 aaPredicted RBP16.49■□□□□ 0.23
SMARCE1-216ENST00000580419 YME1L1Q96TA2 773 aa16.49■□□□□ 0.23
SMARCE1-216ENST00000580419 RC3H2Q9HBD1 1191 aaKnown RBP16.49■□□□□ 0.23
SMARCE1-216ENST00000580419 IGSF9BQ9UPX0 1349 aa16.48■□□□□ 0.23
SMARCE1-216ENST00000580419 H3BNC9 293 aa16.48■□□□□ 0.23
SMARCE1-216ENST00000580419 RFXAPO00287 272 aa16.48■□□□□ 0.23
SMARCE1-216ENST00000580419 PDIA3P30101 505 aaKnown RBP16.48■□□□□ 0.23
SMARCE1-216ENST00000580419 KRT76Q01546 638 aa16.48■□□□□ 0.23
SMARCE1-216ENST00000580419 COL19A1Q14993 1142 aa16.48■□□□□ 0.23
SMARCE1-216ENST00000580419 PTPROQ16827 1216 aa16.48■□□□□ 0.23
SMARCE1-216ENST00000580419 ZNF484Q5JVG2 852 aa16.48■□□□□ 0.23
SMARCE1-216ENST00000580419 ODR4Q5SWX8 454 aa16.48■□□□□ 0.23
SMARCE1-216ENST00000580419 GALNT17Q6IS24 598 aa16.48■□□□□ 0.23
SMARCE1-216ENST00000580419 PLA2G4DQ86XP0 818 aa16.48■□□□□ 0.23
SMARCE1-216ENST00000580419 CRIPAKQ8N1N5 446 aa16.48■□□□□ 0.23
SMARCE1-216ENST00000580419 FBXO22Q8NEZ5 403 aa16.48■□□□□ 0.23
SMARCE1-216ENST00000580419 ADAMTS19Q8TE59 1207 aa16.48■□□□□ 0.23
SMARCE1-216ENST00000580419 DNAJB3Q8WWF6 145 aa16.48■□□□□ 0.23
SMARCE1-216ENST00000580419 CLP1Q92989 425 aaKnown RBP16.48■□□□□ 0.23
SMARCE1-216ENST00000580419 CERS4Q9HA82 394 aa16.48■□□□□ 0.23
SMARCE1-216ENST00000580419 MAFBQ9Y5Q3 323 aaPredicted RBP16.48■□□□□ 0.23
SMARCE1-216ENST00000580419 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.47■□□□□ 0.23
SMARCE1-216ENST00000580419 M0QZ92 97 aa16.47■□□□□ 0.23
SMARCE1-216ENST00000580419 ENPP3O14638 875 aa16.47■□□□□ 0.23
SMARCE1-216ENST00000580419 CCNE2O96020 404 aa16.47■□□□□ 0.23
SMARCE1-216ENST00000580419 MARK3P27448 753 aa16.47■□□□□ 0.23
SMARCE1-216ENST00000580419 EPC2Q52LR7 807 aa16.47■□□□□ 0.23
SMARCE1-216ENST00000580419 MIS18BP1Q6P0N0 1132 aa16.47■□□□□ 0.23
SMARCE1-216ENST00000580419 TMCO2Q7Z6W1 182 aaPredicted RBP16.47■□□□□ 0.23
SMARCE1-216ENST00000580419 ZNF689Q96CS4 500 aaPredicted RBP16.47■□□□□ 0.23
SMARCE1-216ENST00000580419 IL17RAQ96F46 866 aa16.47■□□□□ 0.23
SMARCE1-216ENST00000580419 UHRF1Q96T88 793 aaPredicted RBP16.47■□□□□ 0.23
SMARCE1-216ENST00000580419 PLVAPQ9BX97 442 aa16.47■□□□□ 0.23
SMARCE1-216ENST00000580419 OSBPL7Q9BZF2 842 aa16.47■□□□□ 0.23
SMARCE1-216ENST00000580419 LMAN2LQ9H0V9 348 aa16.47■□□□□ 0.23
SMARCE1-216ENST00000580419 TRPC6Q9Y210 931 aa16.47■□□□□ 0.23
SMARCE1-216ENST00000580419 CDY2AQ9Y6F7 541 aa16.47■□□□□ 0.23
SMARCE1-216ENST00000580419 TCF20Q9UGU0 1960 aaKnown RBP16.47■□□□□ 0.23
SMARCE1-216ENST00000580419 NCK2O43639 380 aa16.46■□□□□ 0.23
SMARCE1-216ENST00000580419 GHRP10912 638 aa16.46■□□□□ 0.23
SMARCE1-216ENST00000580419 TIGD5Q53EQ6 642 aa16.46■□□□□ 0.23
SMARCE1-216ENST00000580419 NAALADL2Q58DX5 795 aa16.46■□□□□ 0.23
SMARCE1-216ENST00000580419 MTHFD1LQ6UB35 978 aa16.46■□□□□ 0.23
SMARCE1-216ENST00000580419 MOXD1Q6UVY6 613 aa16.46■□□□□ 0.23
SMARCE1-216ENST00000580419 TRIM22Q8IYM9 498 aa16.46■□□□□ 0.23
SMARCE1-216ENST00000580419 BBXQ8WY36 941 aaPredicted RBP16.46■□□□□ 0.23
SMARCE1-216ENST00000580419 RIT2Q99578 217 aa16.46■□□□□ 0.23
SMARCE1-216ENST00000580419 CELF4Q9BZC1 486 aaKnown RBP16.46■□□□□ 0.23
SMARCE1-216ENST00000580419 TMEM260Q9NX78 707 aa16.46■□□□□ 0.23
SMARCE1-216ENST00000580419 CEP131Q9UPN4 1083 aa16.46■□□□□ 0.23
SMARCE1-216ENST00000580419 TRPV2Q9Y5S1 764 aa16.46■□□□□ 0.23
SMARCE1-216ENST00000580419 CYP46A1Q9Y6A2 500 aa16.46■□□□□ 0.23
SMARCE1-216ENST00000580419 EIF5BO60841 1220 aaKnown RBP16.45■□□□□ 0.22
SMARCE1-216ENST00000580419 CPA1P15085 419 aa16.45■□□□□ 0.22
SMARCE1-216ENST00000580419 HOXD11P31277 338 aaPredicted RBP16.45■□□□□ 0.22
SMARCE1-216ENST00000580419 JAKMIP3Q5VZ66 844 aa16.45■□□□□ 0.22
SMARCE1-216ENST00000580419 SPRED2Q7Z698 418 aa16.45■□□□□ 0.22
SMARCE1-216ENST00000580419 TMEM192Q8IY95 271 aa16.45■□□□□ 0.22
SMARCE1-216ENST00000580419 RDM1Q8NG50 284 aa16.45■□□□□ 0.22
SMARCE1-216ENST00000580419 GDPD5Q8WTR4 605 aa16.45■□□□□ 0.22
SMARCE1-216ENST00000580419 LENG9Q96B70 501 aa16.45■□□□□ 0.22
SMARCE1-216ENST00000580419 PGBD1Q96JS3 809 aa16.45■□□□□ 0.22
SMARCE1-216ENST00000580419 FAM167AQ96KS9 214 aa16.45■□□□□ 0.22
SMARCE1-216ENST00000580419 C17orf80Q9BSJ5 609 aa16.45■□□□□ 0.22
SMARCE1-216ENST00000580419 ZNF577Q9BSK1 485 aa16.45■□□□□ 0.22
SMARCE1-216ENST00000580419 ZNF302Q9NR11 478 aa16.45■□□□□ 0.22
SMARCE1-216ENST00000580419 PKD2L1Q9P0L9 805 aa16.45■□□□□ 0.22
SMARCE1-216ENST00000580419 TCEAL9Q9UHQ7 104 aa16.45■□□□□ 0.22
SMARCE1-216ENST00000580419 PCDHA10Q9Y5I2 948 aa16.45■□□□□ 0.22
SMARCE1-216ENST00000580419 ADGRA3Q8IWK6 1321 aa16.45■□□□□ 0.22
SMARCE1-216ENST00000580419 CYP3A7-CYP3A51PA0A087WV96 503 aa16.44■□□□□ 0.22
SMARCE1-216ENST00000580419 MAGEB2O15479 319 aa16.44■□□□□ 0.22
SMARCE1-216ENST00000580419 DGKIO75912 1065 aa16.44■□□□□ 0.22
SMARCE1-216ENST00000580419 LINC00271P0C7V0 271 aa16.44■□□□□ 0.22
SMARCE1-216ENST00000580419 CYP3A7P24462 503 aa16.44■□□□□ 0.22
SMARCE1-216ENST00000580419 TOB2Q14106 344 aaPredicted RBP16.44■□□□□ 0.22
SMARCE1-216ENST00000580419 PUS10Q3MIT2 529 aaKnown RBP16.44■□□□□ 0.22
SMARCE1-216ENST00000580419 PDXDC2PQ6P474 469 aa16.44■□□□□ 0.22
SMARCE1-216ENST00000580419 CPLX2Q6PUV4 134 aaKnown RBP16.44■□□□□ 0.22
SMARCE1-216ENST00000580419 NPAS4Q8IUM7 802 aa16.44■□□□□ 0.22
SMARCE1-216ENST00000580419 CCDC60Q8IWA6 550 aaPredicted RBP16.44■□□□□ 0.22
SMARCE1-216ENST00000580419 CMTR2Q8IYT2 770 aaKnown RBP16.44■□□□□ 0.22
SMARCE1-216ENST00000580419 MICALL1Q8N3F8 863 aa16.44■□□□□ 0.22
SMARCE1-216ENST00000580419 FIBCD1Q8N539 461 aa16.44■□□□□ 0.22
SMARCE1-216ENST00000580419 DAGLBQ8NCG7 672 aa16.44■□□□□ 0.22
SMARCE1-216ENST00000580419 P2RX5Q93086 422 aa16.44■□□□□ 0.22
SMARCE1-216ENST00000580419 C11orf84Q9BUA3 381 aaPredicted RBP16.44■□□□□ 0.22
SMARCE1-216ENST00000580419 AGO3Q9H9G7 860 aaKnown RBP16.44■□□□□ 0.22
SMARCE1-216ENST00000580419 NAP1L2Q9ULW6 460 aaPredicted RBP16.44■□□□□ 0.22
SMARCE1-216ENST00000580419 WDR64B1ANS9 1081 aa16.43■□□□□ 0.22
SMARCE1-216ENST00000580419 ZBTB42B2RXF5 422 aa16.43■□□□□ 0.22
SMARCE1-216ENST00000580419 BACH1O14867 736 aa16.43■□□□□ 0.22
SMARCE1-216ENST00000580419 DEXIO95424 95 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms