RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 BARHL2Q9NY43 387 aa10.19□□□□□ -0.78
GGA3-207ENST00000578896 TRPV2Q9Y5S1 764 aa10.19□□□□□ -0.78
GGA3-207ENST00000578896 TRIOO75962 3097 aa10.19□□□□□ -0.78
GGA3-207ENST00000578896 WDR81Q562E7 1941 aa10.19□□□□□ -0.78
GGA3-207ENST00000578896 RALGAPA2Q2PPJ7 1873 aa10.19□□□□□ -0.78
GGA3-207ENST00000578896 NFASCO94856 1347 aa10.18□□□□□ -0.78
GGA3-207ENST00000578896 ADGRA3Q8IWK6 1321 aa10.18□□□□□ -0.78
GGA3-207ENST00000578896 POTEB3A0JP26 581 aa10.18□□□□□ -0.78
GGA3-207ENST00000578896 FOSP01100 380 aaPredicted RBP10.18□□□□□ -0.78
GGA3-207ENST00000578896 ATP4AP20648 1035 aa10.18□□□□□ -0.78
GGA3-207ENST00000578896 KLRC1P26715 233 aa10.18□□□□□ -0.78
GGA3-207ENST00000578896 SSTR3P32745 418 aaPredicted RBP10.18□□□□□ -0.78
GGA3-207ENST00000578896 BMPR1AP36894 532 aa10.18□□□□□ -0.78
GGA3-207ENST00000578896 SREBF1P36956 1147 aa10.18□□□□□ -0.78
GGA3-207ENST00000578896 CLK2P49760 499 aaKnown RBP10.18□□□□□ -0.78
GGA3-207ENST00000578896 METAP2P50579 478 aaKnown RBP eCLIP10.18□□□□□ -0.78
GGA3-207ENST00000578896 DLX2Q07687 328 aaPredicted RBP10.18□□□□□ -0.78
GGA3-207ENST00000578896 NFX1Q12986 1120 aaKnown RBP10.18□□□□□ -0.78
GGA3-207ENST00000578896 TSGA10IPQ3SY00 556 aa10.18□□□□□ -0.78
GGA3-207ENST00000578896 TIGD5Q53EQ6 642 aa10.18□□□□□ -0.78
GGA3-207ENST00000578896 IER5Q5VY09 327 aa10.18□□□□□ -0.78
GGA3-207ENST00000578896 SWSAP1Q6NVH7 229 aa10.18□□□□□ -0.78
GGA3-207ENST00000578896 POTEBQ6S5H4 581 aa10.18□□□□□ -0.78
GGA3-207ENST00000578896 MTHFD1LQ6UB35 978 aa10.18□□□□□ -0.78
GGA3-207ENST00000578896 CENPQQ7L2Z9 268 aaPredicted RBP10.18□□□□□ -0.78
GGA3-207ENST00000578896 PLPPR4Q7Z2D5 763 aa10.18□□□□□ -0.78
GGA3-207ENST00000578896 CCDC60Q8IWA6 550 aaPredicted RBP10.18□□□□□ -0.78
GGA3-207ENST00000578896 FAM178BQ8IXR5 827 aa10.18□□□□□ -0.78
GGA3-207ENST00000578896 BRF1Q92994 677 aa10.18□□□□□ -0.78
GGA3-207ENST00000578896 PHKBQ93100 1093 aa10.18□□□□□ -0.78
GGA3-207ENST00000578896 ZNF689Q96CS4 500 aaPredicted RBP10.18□□□□□ -0.78
GGA3-207ENST00000578896 JAKMIP1Q96N16 626 aaKnown RBP10.18□□□□□ -0.78
GGA3-207ENST00000578896 CELF4Q9BZC1 486 aaKnown RBP10.18□□□□□ -0.78
GGA3-207ENST00000578896 TMX1Q9H3N1 280 aa10.18□□□□□ -0.78
GGA3-207ENST00000578896 NSUN3Q9H649 340 aaKnown RBP10.18□□□□□ -0.78
GGA3-207ENST00000578896 RC3H2Q9HBD1 1191 aaKnown RBP10.18□□□□□ -0.78
GGA3-207ENST00000578896 C11orf16Q9NQ32 467 aa10.18□□□□□ -0.78
GGA3-207ENST00000578896 CLDND1Q9NY35 253 aa10.18□□□□□ -0.78
GGA3-207ENST00000578896 PADI3Q9ULW8 664 aa10.18□□□□□ -0.78
GGA3-207ENST00000578896 PCDHA2Q9Y5H9 948 aa10.18□□□□□ -0.78
GGA3-207ENST00000578896 MRPL42Q9Y6G3 142 aaKnown RBP10.18□□□□□ -0.78
GGA3-207ENST00000578896 KIAA1671Q9BY89 1806 aa10.18□□□□□ -0.78
GGA3-207ENST00000578896 COL4A6Q14031 1691 aa10.18□□□□□ -0.78
GGA3-207ENST00000578896 GRXCR2A6NFK2 248 aa10.17□□□□□ -0.78
GGA3-207ENST00000578896 LINC01565O15544 149 aa10.17□□□□□ -0.78
GGA3-207ENST00000578896 DHX15O43143 795 aaKnown RBP10.17□□□□□ -0.78
GGA3-207ENST00000578896 MGEA5O60502 916 aa10.17□□□□□ -0.78
GGA3-207ENST00000578896 DGKIO75912 1065 aa10.17□□□□□ -0.78
GGA3-207ENST00000578896 ATG7O95352 703 aa10.17□□□□□ -0.78
GGA3-207ENST00000578896 DNAJB1P25685 340 aa10.17□□□□□ -0.78
GGA3-207ENST00000578896 LTBRP36941 435 aa10.17□□□□□ -0.78
GGA3-207ENST00000578896 KRT76Q01546 638 aa10.17□□□□□ -0.78
GGA3-207ENST00000578896 PKN1Q16512 942 aa10.17□□□□□ -0.78
GGA3-207ENST00000578896 PFKFB3Q16875 520 aaPredicted RBP10.17□□□□□ -0.78
GGA3-207ENST00000578896 PPP1R18Q6NYC8 613 aa10.17□□□□□ -0.78
GGA3-207ENST00000578896 ABHD15Q6UXT9 468 aa10.17□□□□□ -0.78
GGA3-207ENST00000578896 GJD3Q8N144 294 aa10.17□□□□□ -0.78
GGA3-207ENST00000578896 NEK9Q8TD19 979 aa10.17□□□□□ -0.78
GGA3-207ENST00000578896 ZNF668Q96K58 619 aaPredicted RBP10.17□□□□□ -0.78
GGA3-207ENST00000578896 LARP6Q9BRS8 491 aaKnown RBP10.17□□□□□ -0.78
GGA3-207ENST00000578896 C1QTNF1Q9BXJ1 281 aa10.17□□□□□ -0.78
GGA3-207ENST00000578896 ZNF302Q9NR11 478 aa10.17□□□□□ -0.78
GGA3-207ENST00000578896 HCSTQ9UBK5 93 aa10.17□□□□□ -0.78
GGA3-207ENST00000578896 NOC2LQ9Y3T9 749 aaKnown RBP10.17□□□□□ -0.78
GGA3-207ENST00000578896 PCDHGC5Q9Y5F6 944 aa10.17□□□□□ -0.78
GGA3-207ENST00000578896 SNX14Q9Y5W7 946 aa10.17□□□□□ -0.78
GGA3-207ENST00000578896 IGLV3-22A0A075B6J6 115 aa10.16□□□□□ -0.78
GGA3-207ENST00000578896 IGKV6D-21A0A0A0MT36 114 aa10.16□□□□□ -0.78
GGA3-207ENST00000578896 C5orf67F2Z3F1 127 aa10.16□□□□□ -0.78
GGA3-207ENST00000578896 M0QZ92 97 aa10.16□□□□□ -0.78
GGA3-207ENST00000578896 SCG2P13521 617 aa10.16□□□□□ -0.78
GGA3-207ENST00000578896 IRS1P35568 1242 aa10.16□□□□□ -0.78
GGA3-207ENST00000578896 CCT2P78371 535 aaKnown RBP10.16□□□□□ -0.78
GGA3-207ENST00000578896 HYAL1Q12794 435 aa10.16□□□□□ -0.78
GGA3-207ENST00000578896 PAK2Q13177 524 aa10.16□□□□□ -0.78
GGA3-207ENST00000578896 AP3B2Q13367 1082 aa10.16□□□□□ -0.78
GGA3-207ENST00000578896 CAMK1Q14012 370 aa10.16□□□□□ -0.78
GGA3-207ENST00000578896 KRT32Q14532 448 aa10.16□□□□□ -0.78
GGA3-207ENST00000578896 TMEM31Q5JXX7 168 aa10.16□□□□□ -0.78
GGA3-207ENST00000578896 PDXDC2PQ6P474 469 aa10.16□□□□□ -0.78
GGA3-207ENST00000578896 KIAA0319LQ8IZA0 1049 aa10.16□□□□□ -0.78
GGA3-207ENST00000578896 ATP8B4Q8TF62 1192 aa10.16□□□□□ -0.78
GGA3-207ENST00000578896 TMEM40Q8WWA1 233 aa10.16□□□□□ -0.78
GGA3-207ENST00000578896 GJA10Q969M2 543 aa10.16□□□□□ -0.78
GGA3-207ENST00000578896 PABPC5Q96DU9 382 aaKnown RBP10.16□□□□□ -0.78
GGA3-207ENST00000578896 ZNF577Q9BSK1 485 aa10.16□□□□□ -0.78
GGA3-207ENST00000578896 NCOA5Q9HCD5 579 aaKnown RBP10.16□□□□□ -0.78
GGA3-207ENST00000578896 PLAGL2Q9UPG8 496 aa10.16□□□□□ -0.78
GGA3-207ENST00000578896 FNDC1Q4ZHG4 1894 aaPredicted RBP10.15□□□□□ -0.78
GGA3-207ENST00000578896 IGSF9BQ9UPX0 1349 aa10.15□□□□□ -0.78
GGA3-207ENST00000578896 SMIM35A0A1B0GVV1 85 aa10.15□□□□□ -0.78
GGA3-207ENST00000578896 ZBTB42B2RXF5 422 aa10.15□□□□□ -0.78
GGA3-207ENST00000578896 PI4K2BG5E9Z4 385 aa10.15□□□□□ -0.78
GGA3-207ENST00000578896 IPO5O00410 1097 aaKnown RBP10.15□□□□□ -0.78
GGA3-207ENST00000578896 EDIL3O43854 480 aa10.15□□□□□ -0.78
GGA3-207ENST00000578896 HBP1O60381 514 aa10.15□□□□□ -0.78
GGA3-207ENST00000578896 DTNBO60941 627 aa10.15□□□□□ -0.78
GGA3-207ENST00000578896 VTNP04004 478 aa10.15□□□□□ -0.78
GGA3-207ENST00000578896 ITGB1P05556 798 aa10.15□□□□□ -0.78
GGA3-207ENST00000578896 RB1P06400 928 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms