RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 CHMP2AO43633 222 aa12.31□□□□□ -0.44
RPAIN-212ENST00000573126 AFPP02771 609 aaKnown RBP12.31□□□□□ -0.44
RPAIN-212ENST00000573126 GOLGA6DP0CG33 693 aa12.31□□□□□ -0.44
RPAIN-212ENST00000573126 DACT2Q5SW24 774 aa12.31□□□□□ -0.44
RPAIN-212ENST00000573126 TSEN2Q8NCE0 465 aaKnown RBP12.31□□□□□ -0.44
RPAIN-212ENST00000573126 GOLGA6AQ9NYA3 693 aa12.31□□□□□ -0.44
RPAIN-212ENST00000573126 TSKSQ9UJT2 592 aa12.31□□□□□ -0.44
RPAIN-212ENST00000573126 VAV3Q9UKW4 847 aa12.31□□□□□ -0.44
RPAIN-212ENST00000573126 PCDHB13Q9Y5F0 798 aa12.31□□□□□ -0.44
RPAIN-212ENST00000573126 PCDHGC5Q9Y5F6 944 aa12.31□□□□□ -0.44
RPAIN-212ENST00000573126 QSER1Q2KHR3 1735 aa12.31□□□□□ -0.44
RPAIN-212ENST00000573126 ANKRD31Q8N7Z5 1873 aa12.31□□□□□ -0.44
RPAIN-212ENST00000573126 ZBTB39O15060 712 aa12.31□□□□□ -0.44
RPAIN-212ENST00000573126 TBX3O15119 743 aa12.31□□□□□ -0.44
RPAIN-212ENST00000573126 NR3C1P04150 777 aa12.31□□□□□ -0.44
RPAIN-212ENST00000573126 BMP3P12645 472 aa12.31□□□□□ -0.44
RPAIN-212ENST00000573126 PON1P27169 355 aa12.31□□□□□ -0.44
RPAIN-212ENST00000573126 PDE6BP35913 854 aa12.31□□□□□ -0.44
RPAIN-212ENST00000573126 EPHB4P54760 987 aa12.31□□□□□ -0.44
RPAIN-212ENST00000573126 CTTNQ14247 550 aaKnown RBP12.31□□□□□ -0.44
RPAIN-212ENST00000573126 RRP1BQ14684 758 aaKnown RBP12.31□□□□□ -0.44
RPAIN-212ENST00000573126 STRIP1Q5VSL9 837 aa12.31□□□□□ -0.44
RPAIN-212ENST00000573126 LRRC31Q6UY01 552 aa12.31□□□□□ -0.44
RPAIN-212ENST00000573126 EPM2AIP1Q7L775 607 aaPredicted RBP12.31□□□□□ -0.44
RPAIN-212ENST00000573126 IRF2BP2Q7Z5L9 587 aa12.31□□□□□ -0.44
RPAIN-212ENST00000573126 RBM46Q8TBY0 533 aaKnown RBP12.31□□□□□ -0.44
RPAIN-212ENST00000573126 EIF2AK1Q9BQI3 630 aaKnown RBP12.31□□□□□ -0.44
RPAIN-212ENST00000573126 QTRT2Q9H974 415 aaKnown RBP12.31□□□□□ -0.44
RPAIN-212ENST00000573126 RABGAP1Q9Y3P9 1069 aa12.31□□□□□ -0.44
RPAIN-212ENST00000573126 ASTN1O14525 1302 aa12.3□□□□□ -0.44
RPAIN-212ENST00000573126 FAM170AA1A519 330 aa12.3□□□□□ -0.44
RPAIN-212ENST00000573126 TULP2O00295 520 aa12.3□□□□□ -0.44
RPAIN-212ENST00000573126 TBCAO75347 108 aaKnown RBP12.3□□□□□ -0.44
RPAIN-212ENST00000573126 CARSP49589 748 aaKnown RBP12.3□□□□□ -0.44
RPAIN-212ENST00000573126 UBXN2AP68543 259 aa12.3□□□□□ -0.44
RPAIN-212ENST00000573126 GUCY2DQ02846 1103 aa12.3□□□□□ -0.44
RPAIN-212ENST00000573126 KCTD19Q17RG1 926 aaPredicted RBP12.3□□□□□ -0.44
RPAIN-212ENST00000573126 MEI1Q5TIA1 1274 aa12.3□□□□□ -0.44
RPAIN-212ENST00000573126 GJB7Q6PEY0 223 aa12.3□□□□□ -0.44
RPAIN-212ENST00000573126 SAMD1Q6SPF0 538 aaPredicted RBP12.3□□□□□ -0.44
RPAIN-212ENST00000573126 KRT27Q7Z3Y8 459 aa12.3□□□□□ -0.44
RPAIN-212ENST00000573126 FRMD5Q7Z6J6 570 aa12.3□□□□□ -0.44
RPAIN-212ENST00000573126 GMCL1P1Q8NEA9 526 aa12.3□□□□□ -0.44
RPAIN-212ENST00000573126 IFT81Q8WYA0 676 aa12.3□□□□□ -0.44
RPAIN-212ENST00000573126 GMCL1Q96IK5 515 aa12.3□□□□□ -0.44
RPAIN-212ENST00000573126 FAM20AQ96MK3 541 aa12.3□□□□□ -0.44
RPAIN-212ENST00000573126 AJAP1Q9UKB5 411 aaPredicted RBP12.3□□□□□ -0.44
RPAIN-212ENST00000573126 NFU1Q9UMS0 254 aa12.3□□□□□ -0.44
RPAIN-212ENST00000573126 PDXKO00764 312 aa12.3□□□□□ -0.44
RPAIN-212ENST00000573126 HEXIM1O94992 359 aaKnown RBP12.3□□□□□ -0.44
RPAIN-212ENST00000573126 CFBP00751 764 aa12.3□□□□□ -0.44
RPAIN-212ENST00000573126 FOSP01100 380 aaPredicted RBP12.3□□□□□ -0.44
RPAIN-212ENST00000573126 ECE1P42892 770 aa12.3□□□□□ -0.44
RPAIN-212ENST00000573126 DPY19L2P1Q6NXN4 242 aa12.3□□□□□ -0.44
RPAIN-212ENST00000573126 FAM76AQ8TAV0 307 aa12.3□□□□□ -0.44
RPAIN-212ENST00000573126 CSRNP1Q96S65 589 aa12.3□□□□□ -0.44
RPAIN-212ENST00000573126 KRT12Q99456 494 aa12.3□□□□□ -0.44
RPAIN-212ENST00000573126 EPB41L5Q9HCM4 733 aa12.3□□□□□ -0.44
RPAIN-212ENST00000573126 CALUO43852 315 aaPredicted RBP12.29□□□□□ -0.44
RPAIN-212ENST00000573126 IVLP07476 585 aa12.29□□□□□ -0.44
RPAIN-212ENST00000573126 NOP2P46087 812 aaKnown RBP12.29□□□□□ -0.44
RPAIN-212ENST00000573126 TRADDQ15628 312 aa12.29□□□□□ -0.44
RPAIN-212ENST00000573126 DNAJC21Q5F1R6 531 aaKnown RBP12.29□□□□□ -0.44
RPAIN-212ENST00000573126 EMBQ6PCB8 327 aa12.29□□□□□ -0.44
RPAIN-212ENST00000573126 KSR1Q8IVT5 923 aa12.29□□□□□ -0.44
RPAIN-212ENST00000573126 TPH2Q8IWU9 490 aa12.29□□□□□ -0.44
RPAIN-212ENST00000573126 SLC35C1Q96A29 364 aa12.29□□□□□ -0.44
RPAIN-212ENST00000573126 INPP4AQ96PE3 977 aaPredicted RBP12.29□□□□□ -0.44
RPAIN-212ENST00000573126 TYW1Q9NV66 732 aaKnown RBP12.29□□□□□ -0.44
RPAIN-212ENST00000573126 GCNT4Q9P109 453 aa12.29□□□□□ -0.44
RPAIN-212ENST00000573126 PRR12Q9ULL5 1215 aa12.29□□□□□ -0.44
RPAIN-212ENST00000573126 SIPA1L1O43166 1804 aa12.29□□□□□ -0.44
RPAIN-212ENST00000573126 KCNK3O14649 394 aa12.29□□□□□ -0.44
RPAIN-212ENST00000573126 TRIM66O15016 1216 aa12.29□□□□□ -0.44
RPAIN-212ENST00000573126 SLC26A4O43511 780 aa12.29□□□□□ -0.44
RPAIN-212ENST00000573126 FAM153BP0C7A2 387 aa12.29□□□□□ -0.44
RPAIN-212ENST00000573126 AOC3Q16853 763 aa12.29□□□□□ -0.44
RPAIN-212ENST00000573126 FAM153CQ494X1 144 aa12.29□□□□□ -0.44
RPAIN-212ENST00000573126 ZC2HC1CQ53FD0 456 aaPredicted RBP12.29□□□□□ -0.44
RPAIN-212ENST00000573126 RBM26Q5T8P6 1007 aaKnown RBP12.29□□□□□ -0.44
RPAIN-212ENST00000573126 ALKBH5Q6P6C2 394 aaKnown RBP12.29□□□□□ -0.44
RPAIN-212ENST00000573126 FAM153AQ9UHL3 310 aa12.29□□□□□ -0.44
RPAIN-212ENST00000573126 RSPH14Q9UHP6 348 aa12.29□□□□□ -0.44
RPAIN-212ENST00000573126 NAGPAQ9UK23 515 aa12.29□□□□□ -0.44
RPAIN-212ENST00000573126 EPB41P11171 864 aaKnown RBP12.28□□□□□ -0.44
RPAIN-212ENST00000573126 NMT1P30419 496 aaKnown RBP12.28□□□□□ -0.44
RPAIN-212ENST00000573126 CIITAP33076 1130 aa12.28□□□□□ -0.44
RPAIN-212ENST00000573126 EPHA7Q15375 998 aa12.28□□□□□ -0.44
RPAIN-212ENST00000573126 RINT1Q6NUQ1 792 aa12.28□□□□□ -0.44
RPAIN-212ENST00000573126 KLHL7Q8IXQ5 586 aa12.28□□□□□ -0.44
RPAIN-212ENST00000573126 RUBCNQ92622 972 aa12.28□□□□□ -0.44
RPAIN-212ENST00000573126 PRMT6Q96LA8 375 aaPredicted RBP12.28□□□□□ -0.44
RPAIN-212ENST00000573126 WDR18Q9BV38 432 aa12.28□□□□□ -0.44
RPAIN-212ENST00000573126 PLCB1Q9NQ66 1216 aa12.28□□□□□ -0.44
RPAIN-212ENST00000573126 RNF14Q9UBS8 474 aa12.28□□□□□ -0.44
RPAIN-212ENST00000573126 IGLV3-22A0A075B6J6 115 aa12.28□□□□□ -0.44
RPAIN-212ENST00000573126 MYO1CO00159 1063 aa12.28□□□□□ -0.44
RPAIN-212ENST00000573126 RPS6KA5O75582 802 aa12.28□□□□□ -0.44
RPAIN-212ENST00000573126 KRT14P02533 472 aa12.28□□□□□ -0.44
RPAIN-212ENST00000573126 GUCY2FP51841 1108 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms