RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 NOP56O00567 594 aaKnown RBP5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 AQP7O14520 342 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 FYB1O15117 783 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 AKR1B10O60218 316 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 DLX3O60479 287 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 DOK2O60496 412 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 H2AFYO75367 372 aaKnown RBP5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 SOAT2O75908 522 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 FGF18O76093 207 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 ECEL1O95672 775 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 CKMT1AP12532 417 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 RAG1P15918 1043 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 CD86P42081 329 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 PHKA1P46020 1223 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 NOP2P46087 812 aaKnown RBP5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 GPR3P46089 330 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 TUBP50607 506 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 LIMK1P53667 647 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 YARSP54577 528 aaKnown RBP5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 TLE2Q04725 743 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 LRRC74AQ0VAA2 488 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 COX10Q12887 443 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 LRP8Q14114 963 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 KRT32Q14532 448 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 POLD3Q15054 466 aaPredicted RBP5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 ZNF423Q2M1K9 1284 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 ARL13BQ3SXY8 428 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 ZACNQ401N2 412 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 ZMYM1Q5SVZ6 1142 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 UBXN11Q5T124 520 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 TXNDC11Q6PKC3 985 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 LMBR1LQ6UX01 489 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 NPNTQ6UXI9 565 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 FAM13CQ8NE31 585 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 GIMAP1Q8WWP7 306 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 JADE3Q92613 823 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 TAF4BQ92750 862 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 HSH2DQ96JZ2 352 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 CNDP2Q96KP4 475 aaKnown RBP5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 POLR3CQ9BUI4 534 aaPredicted RBP5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 ARHGAP39Q9C0H5 1083 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 C2orf40Q9H1Z8 148 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 HPF1Q9NWY4 346 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 RAI14Q9P0K7 980 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 B4GALT6Q9UBX8 382 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 STK17AQ9UEE5 414 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 VPS28Q9UK41 221 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 PCDHGB2Q9Y5G2 931 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 GOLGA8AA7E2F4 631 aa5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 GOLGA8BA8MQT2 603 aa5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 NDC80O14777 642 aa5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 DAPK3O43293 454 aa5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 TSPAN3O60637 253 aa5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 FSBPO95073 299 aa5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 ADH1BP00325 375 aa5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 SLC4A1P02730 911 aa5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 EPHX1P07099 455 aa5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 TATP17735 454 aaPredicted RBP5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 ALAS2P22557 587 aa5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 FSHRP23945 695 aa5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 ATP5F1P24539 256 aaPredicted RBP5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 ARNTP27540 789 aa5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 PDIA3P30101 505 aaKnown RBP5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 HNF4AP41235 474 aa5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 CD151P48509 253 aa5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 NR1H2P55055 460 aa5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 TRPC3Q13507 836 aa5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 BECN1Q14457 450 aa5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 CNN3Q15417 329 aaKnown RBP5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 ANO6Q4KMQ2 910 aa5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 GPR139Q6DWJ6 353 aa5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 IRGCQ6NXR0 463 aa5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 SULF2Q8IWU5 870 aa5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 UNC45BQ8IWX7 931 aa5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 NAT8LQ8N9F0 302 aa5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 AVL9Q8NBF6 648 aa5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 OR13H1Q8NG92 308 aa5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 ADAMTS15Q8TE58 950 aa5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 NANOS1Q8WY41 292 aaKnown RBP5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 MAELQ96JY0 434 aaKnown RBP5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 CNTNAP3BQ96NU0 1288 aa5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 EYA3Q99504 573 aa5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 PAIP2Q9BPZ3 127 aaKnown RBP5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 GPATCH1Q9BRR8 931 aaKnown RBP5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 CNTNAP3Q9BZ76 1288 aa5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 BHLHE41Q9C0J9 482 aaPredicted RBP5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 CBX8Q9HC52 389 aa5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 PREBQ9HCU5 417 aa5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 DCP1AQ9NPI6 582 aaPredicted RBP5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 HAUS2Q9NVX0 235 aa5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 DKK3Q9UBP4 350 aa5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 REV1Q9UBZ9 1251 aa5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 TBC1D29Q9UFV1 150 aa5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 RASAL2Q9UJF2 1139 aa5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 FAM184BQ9ULE4 1060 aa5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 ZNF711Q9Y462 761 aa5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 RSF1Q96T23 1441 aaPredicted RBP5.64□□□□□ -1.51
TOPBP1-210ENST00000572787 ABCC9O60706 1549 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms