RNA–Protein interactions for RNA: ENST00000570546.5

CIITA-204, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 5,342 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-204ENST00000570546 USP17L20D6RJB6 530 aa16.59■□□□□ 0.25
CIITA-204ENST00000570546 CA8P35219 290 aa16.59■□□□□ 0.25
CIITA-204ENST00000570546 VSNL1P62760 191 aa16.59■□□□□ 0.25
CIITA-204ENST00000570546 USP17L24Q0WX57 530 aa16.59■□□□□ 0.25
CIITA-204ENST00000570546 PPP1R2P3Q6NXS1 205 aa16.59■□□□□ 0.25
CIITA-204ENST00000570546 USP17L6PQ6QN14 398 aa16.59■□□□□ 0.25
CIITA-204ENST00000570546 RASGRP2Q7LDG7 609 aa16.59■□□□□ 0.25
CIITA-204ENST00000570546 GOLGA8IPA6NC78 632 aa16.59■□□□□ 0.25
CIITA-204ENST00000570546 GOLGA8JA6NMD2 632 aa16.59■□□□□ 0.25
CIITA-204ENST00000570546 CSF1RP07333 972 aa16.59■□□□□ 0.25
CIITA-204ENST00000570546 INHBAP08476 426 aa16.59■□□□□ 0.25
CIITA-204ENST00000570546 TMEM179Q6ZVK1 233 aa16.59■□□□□ 0.25
CIITA-204ENST00000570546 TC2NQ8N9U0 490 aa16.59■□□□□ 0.25
CIITA-204ENST00000570546 SENP2Q9HC62 589 aa16.59■□□□□ 0.25
CIITA-204ENST00000570546 NARFQ9UHQ1 456 aa16.59■□□□□ 0.25
CIITA-204ENST00000570546 TTLL3Q9Y4R7 772 aa16.59■□□□□ 0.25
CIITA-204ENST00000570546 RWDD2BP57060 319 aa16.58■□□□□ 0.25
CIITA-204ENST00000570546 FOXP4Q8IVH2 680 aaPredicted RBP16.58■□□□□ 0.25
CIITA-204ENST00000570546 CFAP57Q96MR6 1250 aa16.58■□□□□ 0.25
CIITA-204ENST00000570546 ADD3Q9UEY8 706 aaKnown RBP16.58■□□□□ 0.25
CIITA-204ENST00000570546 HPS5Q9UPZ3 1129 aa16.58■□□□□ 0.25
CIITA-204ENST00000570546 KIDINS220Q9ULH0 1771 aa16.58■□□□□ 0.24
CIITA-204ENST00000570546 ANKRD65E5RJM6 399 aa16.58■□□□□ 0.24
CIITA-204ENST00000570546 MIS18BP1Q6P0N0 1132 aa16.58■□□□□ 0.24
CIITA-204ENST00000570546 SEPT14Q6ZU15 432 aa16.58■□□□□ 0.24
CIITA-204ENST00000570546 DIP2AQ14689 1571 aa16.58■□□□□ 0.24
CIITA-204ENST00000570546 CCND2P30279 289 aa16.58■□□□□ 0.24
CIITA-204ENST00000570546 PDXDC1Q6P996 788 aa16.58■□□□□ 0.24
CIITA-204ENST00000570546 GDAP1Q8TB36 358 aa16.58■□□□□ 0.24
CIITA-204ENST00000570546 HESX1Q9UBX0 185 aa16.58■□□□□ 0.24
CIITA-204ENST00000570546 MAD1L1Q9Y6D9 718 aa16.58■□□□□ 0.24
CIITA-204ENST00000570546 CEP170BQ9Y4F5 1589 aaPredicted RBP16.58■□□□□ 0.24
CIITA-204ENST00000570546 TDP2O95551 362 aa16.58■□□□□ 0.24
CIITA-204ENST00000570546 E2F5Q15329 346 aa16.58■□□□□ 0.24
CIITA-204ENST00000570546 KNOP1Q1ED39 458 aaKnown RBP16.58■□□□□ 0.24
CIITA-204ENST00000570546 SLC7A3Q8WY07 619 aa16.58■□□□□ 0.24
CIITA-204ENST00000570546 CD209Q9NNX6 404 aa16.58■□□□□ 0.24
CIITA-204ENST00000570546 ITSN1Q15811 1721 aa16.58■□□□□ 0.24
CIITA-204ENST00000570546 NYAP1Q6ZVC0 841 aa16.57■□□□□ 0.24
CIITA-204ENST00000570546 MAP7D3Q8IWC1 876 aa16.57■□□□□ 0.24
CIITA-204ENST00000570546 CCHCR1Q8TD31 782 aa16.57■□□□□ 0.24
CIITA-204ENST00000570546 SALL3Q9BXA9 1300 aa16.57■□□□□ 0.24
CIITA-204ENST00000570546 SLC12A2P55011 1212 aa16.57■□□□□ 0.24
CIITA-204ENST00000570546 FAM160B2Q86V87 743 aa16.57■□□□□ 0.24
CIITA-204ENST00000570546 CHP1Q99653 195 aa16.57■□□□□ 0.24
CIITA-204ENST00000570546 EPB41L4AQ9HCS5 686 aaPredicted RBP16.57■□□□□ 0.24
CIITA-204ENST00000570546 SEPT10Q9P0V9 454 aa16.57■□□□□ 0.24
CIITA-204ENST00000570546 ESYT3A0FGR9 886 aa16.57■□□□□ 0.24
CIITA-204ENST00000570546 KLHL29Q96CT2 875 aa16.57■□□□□ 0.24
CIITA-204ENST00000570546 MROH2AA6NES4 1674 aa16.57■□□□□ 0.24
CIITA-204ENST00000570546 PODXLO00592 558 aa16.57■□□□□ 0.24
CIITA-204ENST00000570546 SART1O43290 800 aaKnown RBP16.57■□□□□ 0.24
CIITA-204ENST00000570546 LUC7L3O95232 432 aaKnown RBP16.57■□□□□ 0.24
CIITA-204ENST00000570546 BAG2O95816 211 aa16.57■□□□□ 0.24
CIITA-204ENST00000570546 DNAJC24Q6P3W2 148 aa16.57■□□□□ 0.24
CIITA-204ENST00000570546 ADSSL1Q8N142 457 aa16.57■□□□□ 0.24
CIITA-204ENST00000570546 ADPGKQ9BRR6 497 aa16.57■□□□□ 0.24
CIITA-204ENST00000570546 SNX24Q9Y343 169 aa16.57■□□□□ 0.24
CIITA-204ENST00000570546 KIF20BQ96Q89 1820 aa16.57■□□□□ 0.24
CIITA-204ENST00000570546 TADA2BQ86TJ2 420 aa16.56■□□□□ 0.24
CIITA-204ENST00000570546 NCAPG2Q86XI2 1143 aa16.56■□□□□ 0.24
CIITA-204ENST00000570546 COG1Q8WTW3 980 aa16.56■□□□□ 0.24
CIITA-204ENST00000570546 FXR1P51114 621 aaKnown RBP eCLIP16.56■□□□□ 0.24
CIITA-204ENST00000570546 PSMD6Q15008 389 aa16.56■□□□□ 0.24
CIITA-204ENST00000570546 RNF207Q6ZRF8 634 aa16.56■□□□□ 0.24
CIITA-204ENST00000570546 ANKRD36BP1Q96IX9 119 aa16.56■□□□□ 0.24
CIITA-204ENST00000570546 GBP5Q96PP8 586 aa16.56■□□□□ 0.24
CIITA-204ENST00000570546 EFCC1Q9HA90 598 aa16.56■□□□□ 0.24
CIITA-204ENST00000570546 BCAP29Q9UHQ4 241 aa16.56■□□□□ 0.24
CIITA-204ENST00000570546 CSADQ9Y600 493 aa16.56■□□□□ 0.24
CIITA-204ENST00000570546 SYNGAP1Q96PV0 1343 aa16.56■□□□□ 0.24
CIITA-204ENST00000570546 PLEKHG2Q9H7P9 1386 aa16.56■□□□□ 0.24
CIITA-204ENST00000570546 GOLGA8SH3BPF8 625 aa16.56■□□□□ 0.24
CIITA-204ENST00000570546 EVI5O60447 810 aa16.56■□□□□ 0.24
CIITA-204ENST00000570546 ABCD1P33897 745 aa16.56■□□□□ 0.24
CIITA-204ENST00000570546 MSH2P43246 934 aa16.56■□□□□ 0.24
CIITA-204ENST00000570546 TAF12Q16514 161 aa16.56■□□□□ 0.24
CIITA-204ENST00000570546 ADGRF4Q8IZF3 695 aa16.56■□□□□ 0.24
CIITA-204ENST00000570546 CFAP61Q8NHU2 1237 aa16.56■□□□□ 0.24
CIITA-204ENST00000570546 NSUN4Q96CB9 384 aaKnown RBP16.56■□□□□ 0.24
CIITA-204ENST00000570546 MED10Q9BTT4 135 aa16.56■□□□□ 0.24
CIITA-204ENST00000570546 MIF4GDA9UHW6 222 aaKnown RBP16.56■□□□□ 0.24
CIITA-204ENST00000570546 RPSAP08865 295 aaKnown RBP16.56■□□□□ 0.24
CIITA-204ENST00000570546 TFDP1Q14186 410 aa16.56■□□□□ 0.24
CIITA-204ENST00000570546 RAD9BQ6WBX8 426 aa16.56■□□□□ 0.24
CIITA-204ENST00000570546 POTEFA5A3E0 1075 aa16.55■□□□□ 0.24
CIITA-204ENST00000570546 POTEIP0CG38 1075 aa16.55■□□□□ 0.24
CIITA-204ENST00000570546 PRELPP51888 382 aa16.55■□□□□ 0.24
CIITA-204ENST00000570546 DYNLT1P63172 113 aa16.55■□□□□ 0.24
CIITA-204ENST00000570546 POTEGQ6S5H5 508 aa16.55■□□□□ 0.24
CIITA-204ENST00000570546 POTEEQ6S8J3 1075 aa16.55■□□□□ 0.24
CIITA-204ENST00000570546 CCSER1Q9C0I3 900 aa16.55■□□□□ 0.24
CIITA-204ENST00000570546 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.55■□□□□ 0.24
CIITA-204ENST00000570546 PACSIN2Q9UNF0 486 aaPredicted RBP16.55■□□□□ 0.24
CIITA-204ENST00000570546 ACSL3O95573 720 aa16.55■□□□□ 0.24
CIITA-204ENST00000570546 MAP3K21Q5TCX8 1036 aa16.55■□□□□ 0.24
CIITA-204ENST00000570546 RPUSD2Q8IZ73 545 aaKnown RBP16.55■□□□□ 0.24
CIITA-204ENST00000570546 EXOC1LA0A1B0GW35 172 aa16.55■□□□□ 0.24
CIITA-204ENST00000570546 STAT3P40763 770 aa16.55■□□□□ 0.24
CIITA-204ENST00000570546 ARHGAP4P98171 946 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms