RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.94□□□□□ -0.02
SPG7-221ENST00000569720 CCDC12Q8WUD4 166 aaPredicted RBP14.94□□□□□ -0.02
SPG7-221ENST00000569720 TMEM260Q9NX78 707 aa14.94□□□□□ -0.02
SPG7-221ENST00000569720 FAM50BQ9Y247 325 aa14.94□□□□□ -0.02
SPG7-221ENST00000569720 EVPLQ92817 2033 aa14.93□□□□□ -0.02
SPG7-221ENST00000569720 DDX39AO00148 427 aaKnown RBP14.93□□□□□ -0.02
SPG7-221ENST00000569720 NCK2O43639 380 aa14.93□□□□□ -0.02
SPG7-221ENST00000569720 HBP1O60381 514 aa14.93□□□□□ -0.02
SPG7-221ENST00000569720 ATG7O95352 703 aa14.93□□□□□ -0.02
SPG7-221ENST00000569720 STAG3L1P0CL83 205 aa14.93□□□□□ -0.02
SPG7-221ENST00000569720 CDC27P30260 824 aa14.93□□□□□ -0.02
SPG7-221ENST00000569720 TMEM62Q0P6H9 643 aa14.93□□□□□ -0.02
SPG7-221ENST00000569720 PAK2Q13177 524 aa14.93□□□□□ -0.02
SPG7-221ENST00000569720 PFKFB3Q16875 520 aaPredicted RBP14.93□□□□□ -0.02
SPG7-221ENST00000569720 TCEAL5Q5H9L2 206 aa14.93□□□□□ -0.02
SPG7-221ENST00000569720 JAKMIP3Q5VZ66 844 aa14.93□□□□□ -0.02
SPG7-221ENST00000569720 PTCRAQ6ISU1 281 aaPredicted RBP14.93□□□□□ -0.02
SPG7-221ENST00000569720 FAM43BQ6ZT52 329 aaPredicted RBP14.93□□□□□ -0.02
SPG7-221ENST00000569720 PLA2G4DQ86XP0 818 aa14.93□□□□□ -0.02
SPG7-221ENST00000569720 TRAPPC12Q8WVT3 735 aa14.93□□□□□ -0.02
SPG7-221ENST00000569720 ZBTB10Q96DT7 871 aa14.93□□□□□ -0.02
SPG7-221ENST00000569720 PABPC5Q96DU9 382 aaKnown RBP14.93□□□□□ -0.02
SPG7-221ENST00000569720 CELF4Q9BZC1 486 aaKnown RBP14.93□□□□□ -0.02
SPG7-221ENST00000569720 EPHX3Q9H6B9 360 aa14.93□□□□□ -0.02
SPG7-221ENST00000569720 AGO3Q9H9G7 860 aaKnown RBP14.93□□□□□ -0.02
SPG7-221ENST00000569720 C6orf50Q9HD87 102 aa14.93□□□□□ -0.02
SPG7-221ENST00000569720 FAM217BQ9NTX9 383 aaPredicted RBP14.93□□□□□ -0.02
SPG7-221ENST00000569720 TCEAL9Q9UHQ7 104 aa14.93□□□□□ -0.02
SPG7-221ENST00000569720 MYO7AQ13402 2215 aa14.93□□□□□ -0.02
SPG7-221ENST00000569720 ATG2AQ2TAZ0 1938 aa14.92□□□□□ -0.02
SPG7-221ENST00000569720 DGKIO75912 1065 aa14.92□□□□□ -0.02
SPG7-221ENST00000569720 SCG2P13521 617 aa14.92□□□□□ -0.02
SPG7-221ENST00000569720 ADD1P35611 737 aaKnown RBP14.92□□□□□ -0.02
SPG7-221ENST00000569720 KRT76Q01546 638 aa14.92□□□□□ -0.02
SPG7-221ENST00000569720 AKAP17AQ02040 695 aaKnown RBP14.92□□□□□ -0.02
SPG7-221ENST00000569720 TMEM31Q5JXX7 168 aa14.92□□□□□ -0.02
SPG7-221ENST00000569720 MTHFD1LQ6UB35 978 aa14.92□□□□□ -0.02
SPG7-221ENST00000569720 ABHD15Q6UXT9 468 aa14.92□□□□□ -0.02
SPG7-221ENST00000569720 SKAP1Q86WV1 359 aa14.92□□□□□ -0.02
SPG7-221ENST00000569720 NPAS4Q8IUM7 802 aa14.92□□□□□ -0.02
SPG7-221ENST00000569720 FAM178BQ8IXR5 827 aa14.92□□□□□ -0.02
SPG7-221ENST00000569720 NEK9Q8TD19 979 aa14.92□□□□□ -0.02
SPG7-221ENST00000569720 CLP1Q92989 425 aaKnown RBP14.92□□□□□ -0.02
SPG7-221ENST00000569720 ZNF689Q96CS4 500 aaPredicted RBP14.92□□□□□ -0.02
SPG7-221ENST00000569720 PLVAPQ9BX97 442 aa14.92□□□□□ -0.02
SPG7-221ENST00000569720 RC3H2Q9HBD1 1191 aaKnown RBP14.92□□□□□ -0.02
SPG7-221ENST00000569720 ZNF302Q9NR11 478 aa14.92□□□□□ -0.02
SPG7-221ENST00000569720 RNF216Q9NWF9 866 aaPredicted RBP14.92□□□□□ -0.02
SPG7-221ENST00000569720 PADI3Q9ULW8 664 aa14.92□□□□□ -0.02
SPG7-221ENST00000569720 COL1A2P08123 1366 aa14.92□□□□□ -0.02
SPG7-221ENST00000569720 KIAA1671Q9BY89 1806 aa14.92□□□□□ -0.02
SPG7-221ENST00000569720 IGSF9BQ9UPX0 1349 aa14.92□□□□□ -0.02
SPG7-221ENST00000569720 KDM3AQ9Y4C1 1321 aa14.92□□□□□ -0.02
SPG7-221ENST00000569720 IGKV6D-21A0A0A0MT36 114 aa14.91□□□□□ -0.02
SPG7-221ENST00000569720 ESYT2A0FGR8 921 aa14.91□□□□□ -0.02
SPG7-221ENST00000569720 GRXCR2A6NFK2 248 aa14.91□□□□□ -0.02
SPG7-221ENST00000569720 H3BQ06 376 aaPredicted RBP14.91□□□□□ -0.02
SPG7-221ENST00000569720 CYP3A4P08684 503 aa14.91□□□□□ -0.02
SPG7-221ENST00000569720 IL9P15248 144 aa14.91□□□□□ -0.02
SPG7-221ENST00000569720 KLRC1P26715 233 aa14.91□□□□□ -0.02
SPG7-221ENST00000569720 GNA11P29992 359 aa14.91□□□□□ -0.02
SPG7-221ENST00000569720 SSTR3P32745 418 aaPredicted RBP14.91□□□□□ -0.02
SPG7-221ENST00000569720 SETQ01105 290 aaPredicted RBP14.91□□□□□ -0.02
SPG7-221ENST00000569720 APOBRQ0VD83 1088 aa14.91□□□□□ -0.02
SPG7-221ENST00000569720 ZNF484Q5JVG2 852 aa14.91□□□□□ -0.02
SPG7-221ENST00000569720 ODR4Q5SWX8 454 aa14.91□□□□□ -0.02
SPG7-221ENST00000569720 MIS18BP1Q6P0N0 1132 aa14.91□□□□□ -0.02
SPG7-221ENST00000569720 PDXDC2PQ6P474 469 aa14.91□□□□□ -0.02
SPG7-221ENST00000569720 BLOC1S2Q6QNY1 142 aa14.91□□□□□ -0.02
SPG7-221ENST00000569720 Q6ZUG5 572 aa14.91□□□□□ -0.02
SPG7-221ENST00000569720 CMTR2Q8IYT2 770 aaKnown RBP14.91□□□□□ -0.02
SPG7-221ENST00000569720 GJD3Q8N144 294 aa14.91□□□□□ -0.02
SPG7-221ENST00000569720 REXO1Q8N1G1 1221 aaKnown RBP14.91□□□□□ -0.02
SPG7-221ENST00000569720 ATP8B4Q8TF62 1192 aa14.91□□□□□ -0.02
SPG7-221ENST00000569720 JAKMIP1Q96N16 626 aaKnown RBP14.91□□□□□ -0.02
SPG7-221ENST00000569720 TBC1D22BQ9NU19 505 aa14.91□□□□□ -0.02
SPG7-221ENST00000569720 CLDND1Q9NY35 253 aa14.91□□□□□ -0.02
SPG7-221ENST00000569720 RAPGEFL1Q9UHV5 662 aa14.91□□□□□ -0.02
SPG7-221ENST00000569720 LRFN2Q9ULH4 789 aa14.91□□□□□ -0.02
SPG7-221ENST00000569720 WDR81Q562E7 1941 aa14.9□□□□□ -0.02
SPG7-221ENST00000569720 FAM86B1E9PN63 330 aa14.9□□□□□ -0.02
SPG7-221ENST00000569720 IPO5O00410 1097 aaKnown RBP14.9□□□□□ -0.02
SPG7-221ENST00000569720 GRM6O15303 877 aa14.9□□□□□ -0.02
SPG7-221ENST00000569720 CCNE2O96020 404 aa14.9□□□□□ -0.02
SPG7-221ENST00000569720 FAM86B2P0C5J1 330 aa14.9□□□□□ -0.02
SPG7-221ENST00000569720 NAALADL2Q58DX5 795 aa14.9□□□□□ -0.02
SPG7-221ENST00000569720 RTN4RL1Q86UN2 441 aaPredicted RBP14.9□□□□□ -0.02
SPG7-221ENST00000569720 CCDC60Q8IWA6 550 aaPredicted RBP14.9□□□□□ -0.02
SPG7-221ENST00000569720 CKAP2LQ8IYA6 745 aa14.9□□□□□ -0.02
SPG7-221ENST00000569720 BICD2Q8TD16 824 aa14.9□□□□□ -0.02
SPG7-221ENST00000569720 LINC01599Q8WXQ3 324 aa14.9□□□□□ -0.02
SPG7-221ENST00000569720 BRF1Q92994 677 aa14.9□□□□□ -0.02
SPG7-221ENST00000569720 P2RX5Q93086 422 aa14.9□□□□□ -0.02
SPG7-221ENST00000569720 PPP2R3CQ969Q6 453 aa14.9□□□□□ -0.02
SPG7-221ENST00000569720 ZNF577Q9BSK1 485 aa14.9□□□□□ -0.02
SPG7-221ENST00000569720 LRFN3Q9BTN0 628 aa14.9□□□□□ -0.02
SPG7-221ENST00000569720 ZMYND12Q9H0C1 365 aa14.9□□□□□ -0.02
SPG7-221ENST00000569720 GINS2Q9Y248 185 aa14.9□□□□□ -0.02
SPG7-221ENST00000569720 PI4K2BG5E9Z4 385 aa14.89□□□□□ -0.03
SPG7-221ENST00000569720 PRPF3O43395 683 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms