RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 YME1L1Q96TA2 773 aa15.78■□□□□ 0.12
GTF3C1-211ENST00000569653 SDF4Q9BRK5 362 aa15.78■□□□□ 0.12
GTF3C1-211ENST00000569653 TSPYL2Q9H2G4 693 aaPredicted RBP15.78■□□□□ 0.12
GTF3C1-211ENST00000569653 FNDC1Q4ZHG4 1894 aaPredicted RBP15.78■□□□□ 0.12
GTF3C1-211ENST00000569653 PRPF3O43395 683 aaKnown RBP15.77■□□□□ 0.12
GTF3C1-211ENST00000569653 EVCP57679 992 aa15.77■□□□□ 0.12
GTF3C1-211ENST00000569653 TSHZ1Q6ZSZ6 1077 aa15.77■□□□□ 0.12
GTF3C1-211ENST00000569653 PLA2G4DQ86XP0 818 aa15.77■□□□□ 0.12
GTF3C1-211ENST00000569653 TMEM192Q8IY95 271 aa15.77■□□□□ 0.12
GTF3C1-211ENST00000569653 KHSRPQ92945 711 aaKnown RBP eCLIP15.77■□□□□ 0.12
GTF3C1-211ENST00000569653 HLA-CQ95604 372 aa15.77■□□□□ 0.12
GTF3C1-211ENST00000569653 TMX1Q9H3N1 280 aa15.77■□□□□ 0.12
GTF3C1-211ENST00000569653 CDHR5Q9HBB8 845 aa15.77■□□□□ 0.12
GTF3C1-211ENST00000569653 CD320Q9NPF0 282 aa15.77■□□□□ 0.12
GTF3C1-211ENST00000569653 PPP4R2Q9NY27 417 aa15.77■□□□□ 0.12
GTF3C1-211ENST00000569653 RAPGEFL1Q9UHV5 662 aa15.77■□□□□ 0.12
GTF3C1-211ENST00000569653 COG5Q9UP83 839 aa15.77■□□□□ 0.12
GTF3C1-211ENST00000569653 TRPC6Q9Y210 931 aa15.77■□□□□ 0.12
GTF3C1-211ENST00000569653 PCDHA2Q9Y5H9 948 aa15.77■□□□□ 0.12
GTF3C1-211ENST00000569653 PLXNA4Q9HCM2 1894 aa15.77■□□□□ 0.11
GTF3C1-211ENST00000569653 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.76■□□□□ 0.11
GTF3C1-211ENST00000569653 POTEB3A0JP26 581 aa15.76■□□□□ 0.11
GTF3C1-211ENST00000569653 RRN3P2A6NIE6 340 aa15.76■□□□□ 0.11
GTF3C1-211ENST00000569653 H3BNC9 293 aa15.76■□□□□ 0.11
GTF3C1-211ENST00000569653 PDIA3P30101 505 aaKnown RBP15.76■□□□□ 0.11
GTF3C1-211ENST00000569653 POTEBQ6S5H4 581 aa15.76■□□□□ 0.11
GTF3C1-211ENST00000569653 MTHFD1LQ6UB35 978 aa15.76■□□□□ 0.11
GTF3C1-211ENST00000569653 ZNF689Q96CS4 500 aaPredicted RBP15.76■□□□□ 0.11
GTF3C1-211ENST00000569653 LARP6Q9BRS8 491 aaKnown RBP15.76■□□□□ 0.11
GTF3C1-211ENST00000569653 AZI2Q9H6S1 392 aa15.76■□□□□ 0.11
GTF3C1-211ENST00000569653 UBE2ZQ9H832 354 aaPredicted RBP15.76■□□□□ 0.11
GTF3C1-211ENST00000569653 TRPV2Q9Y5S1 764 aa15.76■□□□□ 0.11
GTF3C1-211ENST00000569653 TRIOO75962 3097 aa15.76■□□□□ 0.11
GTF3C1-211ENST00000569653 ADGRA3Q8IWK6 1321 aa15.75■□□□□ 0.11
GTF3C1-211ENST00000569653 IGSF9BQ9UPX0 1349 aa15.75■□□□□ 0.11
GTF3C1-211ENST00000569653 IPO5O00410 1097 aaKnown RBP15.75■□□□□ 0.11
GTF3C1-211ENST00000569653 MGEA5O60502 916 aa15.75■□□□□ 0.11
GTF3C1-211ENST00000569653 GATMP50440 423 aa15.75■□□□□ 0.11
GTF3C1-211ENST00000569653 CCT2P78371 535 aaKnown RBP15.75■□□□□ 0.11
GTF3C1-211ENST00000569653 FGD1P98174 961 aa15.75■□□□□ 0.11
GTF3C1-211ENST00000569653 GPM6BQ13491 265 aa15.75■□□□□ 0.11
GTF3C1-211ENST00000569653 TMEM266Q2M3C6 531 aa15.75■□□□□ 0.11
GTF3C1-211ENST00000569653 REXO1Q8N1G1 1221 aaKnown RBP15.75■□□□□ 0.11
GTF3C1-211ENST00000569653 ATP8B4Q8TF62 1192 aa15.75■□□□□ 0.11
GTF3C1-211ENST00000569653 TMEM40Q8WWA1 233 aa15.75■□□□□ 0.11
GTF3C1-211ENST00000569653 MRPL38Q96DV4 380 aaKnown RBP15.75■□□□□ 0.11
GTF3C1-211ENST00000569653 IL17RAQ96F46 866 aa15.75■□□□□ 0.11
GTF3C1-211ENST00000569653 VPS54Q9P1Q0 977 aa15.75■□□□□ 0.11
GTF3C1-211ENST00000569653 GRM6O15303 877 aa15.74■□□□□ 0.11
GTF3C1-211ENST00000569653 DTNBO60941 627 aa15.74■□□□□ 0.11
GTF3C1-211ENST00000569653 DGKIO75912 1065 aa15.74■□□□□ 0.11
GTF3C1-211ENST00000569653 IFNAR1P17181 557 aa15.74■□□□□ 0.11
GTF3C1-211ENST00000569653 KLRC1P26715 233 aa15.74■□□□□ 0.11
GTF3C1-211ENST00000569653 CIITAP33076 1130 aa15.74■□□□□ 0.11
GTF3C1-211ENST00000569653 ZNF76P36508 570 aa15.74■□□□□ 0.11
GTF3C1-211ENST00000569653 NPY5RQ15761 445 aa15.74■□□□□ 0.11
GTF3C1-211ENST00000569653 AAK1Q2M2I8 961 aa15.74■□□□□ 0.11
GTF3C1-211ENST00000569653 SWSAP1Q6NVH7 229 aa15.74■□□□□ 0.11
GTF3C1-211ENST00000569653 RSPH3Q86UC2 560 aa15.74■□□□□ 0.11
GTF3C1-211ENST00000569653 KIAA0319LQ8IZA0 1049 aa15.74■□□□□ 0.11
GTF3C1-211ENST00000569653 GJA10Q969M2 543 aa15.74■□□□□ 0.11
GTF3C1-211ENST00000569653 SLC26A6Q9BXS9 759 aa15.74■□□□□ 0.11
GTF3C1-211ENST00000569653 RNF26Q9BY78 433 aaPredicted RBP15.74■□□□□ 0.11
GTF3C1-211ENST00000569653 CELF4Q9BZC1 486 aaKnown RBP15.74■□□□□ 0.11
GTF3C1-211ENST00000569653 GLT8D2Q9H1C3 349 aa15.74■□□□□ 0.11
GTF3C1-211ENST00000569653 ZSWIM6Q9HCJ5 1215 aa15.74■□□□□ 0.11
GTF3C1-211ENST00000569653 PADI3Q9ULW8 664 aa15.74■□□□□ 0.11
GTF3C1-211ENST00000569653 KDM3AQ9Y4C1 1321 aa15.73■□□□□ 0.11
GTF3C1-211ENST00000569653 CCDC196A0A1B0GTZ2 297 aa15.73■□□□□ 0.11
GTF3C1-211ENST00000569653 SMIM35A0A1B0GVV1 85 aa15.73■□□□□ 0.11
GTF3C1-211ENST00000569653 C5orf67F2Z3F1 127 aa15.73■□□□□ 0.11
GTF3C1-211ENST00000569653 BACH1O14867 736 aa15.73■□□□□ 0.11
GTF3C1-211ENST00000569653 C22orf31O95567 290 aa15.73■□□□□ 0.11
GTF3C1-211ENST00000569653 CTNNB1P35222 781 aa15.73■□□□□ 0.11
GTF3C1-211ENST00000569653 CAMK1Q14012 370 aa15.73■□□□□ 0.11
GTF3C1-211ENST00000569653 COL19A1Q14993 1142 aa15.73■□□□□ 0.11
GTF3C1-211ENST00000569653 PRR16Q569H4 304 aa15.73■□□□□ 0.11
GTF3C1-211ENST00000569653 TCEAL5Q5H9L2 206 aa15.73■□□□□ 0.11
GTF3C1-211ENST00000569653 FIBCD1Q8N539 461 aa15.73■□□□□ 0.11
GTF3C1-211ENST00000569653 IL27Q8NEV9 243 aa15.73■□□□□ 0.11
GTF3C1-211ENST00000569653 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.73■□□□□ 0.11
GTF3C1-211ENST00000569653 CLP1Q92989 425 aaKnown RBP15.73■□□□□ 0.11
GTF3C1-211ENST00000569653 AIFM3Q96NN9 605 aa15.73■□□□□ 0.11
GTF3C1-211ENST00000569653 SAMD11Q96NU1 681 aa15.73■□□□□ 0.11
GTF3C1-211ENST00000569653 ZNF577Q9BSK1 485 aa15.73■□□□□ 0.11
GTF3C1-211ENST00000569653 C6orf50Q9HD87 102 aa15.73■□□□□ 0.11
GTF3C1-211ENST00000569653 ERVK-5Q9HDB9 667 aa15.73■□□□□ 0.11
GTF3C1-211ENST00000569653 ZNF302Q9NR11 478 aa15.73■□□□□ 0.11
GTF3C1-211ENST00000569653 MRPL42Q9Y6G3 142 aaKnown RBP15.73■□□□□ 0.11
GTF3C1-211ENST00000569653 ZNF862O60290 1169 aa15.72■□□□□ 0.11
GTF3C1-211ENST00000569653 HBP1O60381 514 aa15.72■□□□□ 0.11
GTF3C1-211ENST00000569653 KCNA5P22460 613 aa15.72■□□□□ 0.11
GTF3C1-211ENST00000569653 UGCGQ16739 394 aa15.72■□□□□ 0.11
GTF3C1-211ENST00000569653 IER5Q5VY09 327 aa15.72■□□□□ 0.11
GTF3C1-211ENST00000569653 PDXDC2PQ6P474 469 aa15.72■□□□□ 0.11
GTF3C1-211ENST00000569653 RUFY3Q7L099 469 aa15.72■□□□□ 0.11
GTF3C1-211ENST00000569653 BANK1Q8NDB2 785 aa15.72■□□□□ 0.11
GTF3C1-211ENST00000569653 PPP1R16BQ96T49 567 aa15.72■□□□□ 0.11
GTF3C1-211ENST00000569653 UPF3BQ9BZI7 483 aaKnown RBP15.72■□□□□ 0.11
GTF3C1-211ENST00000569653 EPHX3Q9H6B9 360 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms