RNA–Protein interactions for RNA: ENST00000568394.1

AC009041.2-204, humanhuman

TSL 1 (best) BASIC

Gene AC009041.2, Length 3,343 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.2-204ENST00000568394 SNX29Q8TEQ0 813 aa21.56■■□□□ 1.04
AC009041.2-204ENST00000568394 U2AF1L4Q8WU68 220 aaKnown RBP21.56■■□□□ 1.04
AC009041.2-204ENST00000568394 TAF11Q15544 211 aa21.56■■□□□ 1.04
AC009041.2-204ENST00000568394 TRPM8Q7Z2W7 1104 aa21.56■■□□□ 1.04
AC009041.2-204ENST00000568394 MTFR1LQ9H019 292 aa21.56■■□□□ 1.04
AC009041.2-204ENST00000568394 PCDHA6Q9UN73 950 aa21.56■■□□□ 1.04
AC009041.2-204ENST00000568394 C15orf41Q9Y2V0 281 aa21.56■■□□□ 1.04
AC009041.2-204ENST00000568394 ATP6V0A2Q9Y487 856 aa21.56■■□□□ 1.04
AC009041.2-204ENST00000568394 PCDHA8Q9Y5H6 950 aa21.56■■□□□ 1.04
AC009041.2-204ENST00000568394 CDK17Q00537 523 aa21.55■■□□□ 1.04
AC009041.2-204ENST00000568394 XRCC4Q13426 336 aa21.55■■□□□ 1.04
AC009041.2-204ENST00000568394 ARPP21Q9UBL0 812 aaPredicted RBP21.55■■□□□ 1.04
AC009041.2-204ENST00000568394 TLR2O60603 784 aa21.55■■□□□ 1.04
AC009041.2-204ENST00000568394 TNFRSF8P28908 595 aa21.55■■□□□ 1.04
AC009041.2-204ENST00000568394 IRX1P78414 480 aaPredicted RBP21.55■■□□□ 1.04
AC009041.2-204ENST00000568394 BYSLQ13895 437 aaKnown RBP21.55■■□□□ 1.04
AC009041.2-204ENST00000568394 NSUN4Q96CB9 384 aaKnown RBP21.55■■□□□ 1.04
AC009041.2-204ENST00000568394 CALR3Q96L12 384 aaKnown RBP21.55■■□□□ 1.04
AC009041.2-204ENST00000568394 HOOK3Q86VS8 718 aa21.55■■□□□ 1.04
AC009041.2-204ENST00000568394 C4orf32Q8N8J7 132 aa21.55■■□□□ 1.04
AC009041.2-204ENST00000568394 DDAH1O94760 285 aa21.54■■□□□ 1.04
AC009041.2-204ENST00000568394 SLC16A2P36021 539 aa21.54■■□□□ 1.04
AC009041.2-204ENST00000568394 SESN3P58005 492 aa21.54■■□□□ 1.04
AC009041.2-204ENST00000568394 MREGQ8N565 214 aa21.54■■□□□ 1.04
AC009041.2-204ENST00000568394 RIOK1Q9BRS2 568 aaKnown RBP21.54■■□□□ 1.04
AC009041.2-204ENST00000568394 PTPN22Q9Y2R2 807 aa21.54■■□□□ 1.04
AC009041.2-204ENST00000568394 FGFR4P22455 802 aa21.54■■□□□ 1.04
AC009041.2-204ENST00000568394 ALDH5A1P51649 535 aaPredicted RBP21.54■■□□□ 1.04
AC009041.2-204ENST00000568394 SLC18A3Q16572 532 aa21.54■■□□□ 1.04
AC009041.2-204ENST00000568394 NUGGCQ68CJ6 796 aa21.54■■□□□ 1.04
AC009041.2-204ENST00000568394 LRIG3Q6UXM1 1119 aa21.54■■□□□ 1.04
AC009041.2-204ENST00000568394 ERICH1Q86X53 443 aa21.54■■□□□ 1.04
AC009041.2-204ENST00000568394 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.54■■□□□ 1.04
AC009041.2-204ENST00000568394 PHRF1Q9P1Y6 1649 aaKnown RBP21.54■■□□□ 1.04
AC009041.2-204ENST00000568394 LACTBP83111 547 aaPredicted RBP21.54■■□□□ 1.04
AC009041.2-204ENST00000568394 KCNMA1Q12791 1236 aa21.54■■□□□ 1.04
AC009041.2-204ENST00000568394 SHROOM1Q2M3G4 852 aaPredicted RBP21.54■■□□□ 1.04
AC009041.2-204ENST00000568394 ALKBH5Q6P6C2 394 aaKnown RBP21.54■■□□□ 1.04
AC009041.2-204ENST00000568394 FGFR1OP2Q9NVK5 253 aa21.54■■□□□ 1.04
AC009041.2-204ENST00000568394 AGAP1Q9UPQ3 857 aa21.54■■□□□ 1.04
AC009041.2-204ENST00000568394 PCDHAC2Q9Y5I4 1007 aa21.54■■□□□ 1.04
AC009041.2-204ENST00000568394 SMCO2A6NFE2 343 aa21.53■■□□□ 1.04
AC009041.2-204ENST00000568394 MGRN1O60291 552 aa21.53■■□□□ 1.04
AC009041.2-204ENST00000568394 PTK2Q05397 1052 aa21.53■■□□□ 1.04
AC009041.2-204ENST00000568394 FIGNQ5HY92 759 aa21.53■■□□□ 1.04
AC009041.2-204ENST00000568394 HGSNATQ68CP4 663 aa21.53■■□□□ 1.04
AC009041.2-204ENST00000568394 MYOCDQ8IZQ8 938 aa21.53■■□□□ 1.04
AC009041.2-204ENST00000568394 DDX12PQ92771 950 aa21.53■■□□□ 1.04
AC009041.2-204ENST00000568394 HOOK2Q96ED9 719 aa21.53■■□□□ 1.04
AC009041.2-204ENST00000568394 PPP1R12CQ9BZL4 782 aa21.53■■□□□ 1.04
AC009041.2-204ENST00000568394 NSRP1Q9H0G5 558 aaKnown RBP21.53■■□□□ 1.04
AC009041.2-204ENST00000568394 COL4A3BPQ9Y5P4 624 aa21.53■■□□□ 1.04
AC009041.2-204ENST00000568394 MYH6P13533 1939 aa21.53■■□□□ 1.04
AC009041.2-204ENST00000568394 FOXO6A8MYZ6 492 aa21.53■■□□□ 1.04
AC009041.2-204ENST00000568394 SMIM24O75264 130 aa21.53■■□□□ 1.04
AC009041.2-204ENST00000568394 ATP11AP98196 1134 aa21.53■■□□□ 1.04
AC009041.2-204ENST00000568394 IKQ13123 557 aaPredicted RBP21.53■■□□□ 1.04
AC009041.2-204ENST00000568394 HERC4Q5GLZ8 1057 aaPredicted RBP21.53■■□□□ 1.04
AC009041.2-204ENST00000568394 MFSD14BQ5SR56 506 aa21.53■■□□□ 1.04
AC009041.2-204ENST00000568394 ZMYND12Q9H0C1 365 aa21.53■■□□□ 1.04
AC009041.2-204ENST00000568394 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.53■■□□□ 1.04
AC009041.2-204ENST00000568394 TMEM260Q9NX78 707 aa21.53■■□□□ 1.04
AC009041.2-204ENST00000568394 F8VZ95 297 aa21.52■■□□□ 1.04
AC009041.2-204ENST00000568394 ZNF572Q7Z3I7 529 aaPredicted RBP21.52■■□□□ 1.04
AC009041.2-204ENST00000568394 TMC3Q7Z5M5 1100 aa21.52■■□□□ 1.04
AC009041.2-204ENST00000568394 TBCKQ8TEA7 893 aa21.52■■□□□ 1.04
AC009041.2-204ENST00000568394 TBC1D22AQ8WUA7 517 aa21.52■■□□□ 1.04
AC009041.2-204ENST00000568394 LARP4BQ92615 738 aaKnown RBP21.52■■□□□ 1.04
AC009041.2-204ENST00000568394 CCSER1Q9C0I3 900 aa21.52■■□□□ 1.04
AC009041.2-204ENST00000568394 KDM4CQ9H3R0 1056 aa21.52■■□□□ 1.04
AC009041.2-204ENST00000568394 NONOQ15233 471 aaKnown RBP eCLIP21.52■■□□□ 1.04
AC009041.2-204ENST00000568394 ARMC3Q5W041 872 aa21.52■■□□□ 1.04
AC009041.2-204ENST00000568394 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.52■■□□□ 1.04
AC009041.2-204ENST00000568394 BSDC1Q9NW68 430 aaPredicted RBP21.52■■□□□ 1.04
AC009041.2-204ENST00000568394 GOLGA6L10A0A0M3HER8 536 aa21.52■■□□□ 1.03
AC009041.2-204ENST00000568394 LGR5O75473 907 aa21.52■■□□□ 1.03
AC009041.2-204ENST00000568394 TNNI2P48788 182 aa21.52■■□□□ 1.03
AC009041.2-204ENST00000568394 SLC29A2Q14542 456 aa21.52■■□□□ 1.03
AC009041.2-204ENST00000568394 EPS8L3Q8TE67 593 aaKnown RBP21.52■■□□□ 1.03
AC009041.2-204ENST00000568394 ZCWPW1Q9H0M4 648 aa21.52■■□□□ 1.03
AC009041.2-204ENST00000568394 TOM1O60784 492 aa21.51■■□□□ 1.03
AC009041.2-204ENST00000568394 COL18A1P39060 1754 aa21.51■■□□□ 1.03
AC009041.2-204ENST00000568394 ARMC9Q7Z3E5 817 aa21.51■■□□□ 1.03
AC009041.2-204ENST00000568394 FAM129AQ9BZQ8 928 aa21.51■■□□□ 1.03
AC009041.2-204ENST00000568394 BMP2KQ9NSY1 1161 aaPredicted RBP21.51■■□□□ 1.03
AC009041.2-204ENST00000568394 CEP72Q9P209 647 aa21.51■■□□□ 1.03
AC009041.2-204ENST00000568394 NR2E1Q9Y466 385 aa21.51■■□□□ 1.03
AC009041.2-204ENST00000568394 SSU72P8A0A1W2PR75 194 aa21.51■■□□□ 1.03
AC009041.2-204ENST00000568394 TCP11X1B4DZS4 312 aa21.51■■□□□ 1.03
AC009041.2-204ENST00000568394 PJA2O43164 708 aa21.51■■□□□ 1.03
AC009041.2-204ENST00000568394 ZNF483Q8TF39 744 aaPredicted RBP21.51■■□□□ 1.03
AC009041.2-204ENST00000568394 PAGR1Q9BTK6 254 aa21.51■■□□□ 1.03
AC009041.2-204ENST00000568394 KCNQ5Q9NR82 932 aa21.51■■□□□ 1.03
AC009041.2-204ENST00000568394 LRRC4BQ9NT99 713 aa21.51■■□□□ 1.03
AC009041.2-204ENST00000568394 PPP1R1BQ9UD71 204 aaPredicted RBP21.51■■□□□ 1.03
AC009041.2-204ENST00000568394 TBK1Q9UHD2 729 aa21.51■■□□□ 1.03
AC009041.2-204ENST00000568394 PNMA3Q9UL41 463 aa21.51■■□□□ 1.03
AC009041.2-204ENST00000568394 SPATA31A5Q5VU36 1347 aa21.5■■□□□ 1.03
AC009041.2-204ENST00000568394 SPATA31A7Q8IWB4 1347 aa21.5■■□□□ 1.03
AC009041.2-204ENST00000568394 H0YGN5 161 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms