RNA–Protein interactions for RNA: ENST00000567109.5

CDH13-209, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDH13, Length 8,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-209ENST00000567109 EPAS1Q99814 870 aa6.71□□□□□ -1.33
CDH13-209ENST00000567109 GINM1Q9NU53 330 aa6.71□□□□□ -1.33
CDH13-209ENST00000567109 V9GY48 417 aaPredicted RBP6.71□□□□□ -1.33
CDH13-209ENST00000567109 RAP1GDS1P52306 607 aa6.71□□□□□ -1.34
CDH13-209ENST00000567109 DDR1Q08345 913 aa6.71□□□□□ -1.34
CDH13-209ENST00000567109 KLHL30Q0D2K2 578 aa6.71□□□□□ -1.34
CDH13-209ENST00000567109 RSBN1LQ6PCB5 846 aaPredicted RBP6.71□□□□□ -1.34
CDH13-209ENST00000567109 ATG9AQ7Z3C6 839 aa6.71□□□□□ -1.34
CDH13-209ENST00000567109 IGSF22Q8N9C0 903 aa6.71□□□□□ -1.34
CDH13-209ENST00000567109 PDCD6IPQ8WUM4 868 aaKnown RBP6.71□□□□□ -1.34
CDH13-209ENST00000567109 TCP11Q8WWU5 503 aa6.71□□□□□ -1.34
CDH13-209ENST00000567109 LSM14BQ9BX40 385 aaKnown RBP6.71□□□□□ -1.34
CDH13-209ENST00000567109 SERPINB6P35237 376 aa6.71□□□□□ -1.34
CDH13-209ENST00000567109 STRIP1Q5VSL9 837 aa6.71□□□□□ -1.34
CDH13-209ENST00000567109 RWDD4Q6NW29 188 aaKnown RBP6.71□□□□□ -1.34
CDH13-209ENST00000567109 CABP7Q86V35 215 aa6.71□□□□□ -1.34
CDH13-209ENST00000567109 CCNYQ8ND76 341 aa6.71□□□□□ -1.34
CDH13-209ENST00000567109 TRIM45Q9H8W5 580 aaPredicted RBP6.71□□□□□ -1.34
CDH13-209ENST00000567109 IFT122Q9HBG6 1241 aa6.71□□□□□ -1.34
CDH13-209ENST00000567109 SELENONQ9NZV5 590 aa6.71□□□□□ -1.34
CDH13-209ENST00000567109 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.71□□□□□ -1.34
CDH13-209ENST00000567109 CLRN2A0PK11 232 aa6.71□□□□□ -1.34
CDH13-209ENST00000567109 MED7O43513 233 aa6.71□□□□□ -1.34
CDH13-209ENST00000567109 ABCB4P21439 1286 aa6.71□□□□□ -1.34
CDH13-209ENST00000567109 C16orf72Q14CZ0 275 aa6.71□□□□□ -1.34
CDH13-209ENST00000567109 LRRC8AQ8IWT6 810 aa6.71□□□□□ -1.34
CDH13-209ENST00000567109 NACC1Q96RE7 527 aa6.71□□□□□ -1.34
CDH13-209ENST00000567109 Q9H521 79 aa6.71□□□□□ -1.34
CDH13-209ENST00000567109 PIH1D3Q9NQM4 214 aaKnown RBP6.71□□□□□ -1.34
CDH13-209ENST00000567109 RIPOR2Q9Y4F9 1068 aa6.71□□□□□ -1.34
CDH13-209ENST00000567109 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.71□□□□□ -1.34
CDH13-209ENST00000567109 SMCO2A6NFE2 343 aa6.71□□□□□ -1.34
CDH13-209ENST00000567109 CEP104O60308 925 aa6.71□□□□□ -1.34
CDH13-209ENST00000567109 HIP1RO75146 1068 aa6.71□□□□□ -1.34
CDH13-209ENST00000567109 OAS2P29728 719 aaKnown RBP6.71□□□□□ -1.34
CDH13-209ENST00000567109 STAT2P52630 851 aa6.71□□□□□ -1.34
CDH13-209ENST00000567109 BLVRAP53004 296 aa6.71□□□□□ -1.34
CDH13-209ENST00000567109 CLNS1AP54105 237 aaKnown RBP6.71□□□□□ -1.34
CDH13-209ENST00000567109 PPARDQ03181 441 aa6.71□□□□□ -1.34
CDH13-209ENST00000567109 ARL13BQ3SXY8 428 aa6.71□□□□□ -1.34
CDH13-209ENST00000567109 CFAP221Q4G0U5 840 aa6.71□□□□□ -1.34
CDH13-209ENST00000567109 ARHGAP18Q8N392 663 aa6.71□□□□□ -1.34
CDH13-209ENST00000567109 FBXL13Q8NEE6 735 aa6.71□□□□□ -1.34
CDH13-209ENST00000567109 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.71□□□□□ -1.34
CDH13-209ENST00000567109 THAP12O43422 761 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 CREB3O43889 395 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 PAMP19021 973 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 ADCY8P40145 1251 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 EIF3BP55884 814 aaKnown RBP6.7□□□□□ -1.34
CDH13-209ENST00000567109 CTDSPL2Q05D32 466 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 NELFBQ8WX92 580 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 FAM149B1Q96BN6 582 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 GSDMAQ96QA5 445 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 PPP1R16BQ96T49 567 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 PNPLA7Q6ZV29 1317 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 MYH15Q9Y2K3 1946 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 A0A1B0GVL5 298 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 BAG2O95816 211 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 ABCD1P33897 745 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 CASP7P55210 303 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 RPS6KA1Q15418 735 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 LONRF2Q1L5Z9 754 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 DDX53Q86TM3 631 aaKnown RBP6.7□□□□□ -1.34
CDH13-209ENST00000567109 ZC3H15Q8WU90 426 aaKnown RBP6.7□□□□□ -1.34
CDH13-209ENST00000567109 MTIF3Q9H2K0 278 aaKnown RBP6.7□□□□□ -1.34
CDH13-209ENST00000567109 EIF3CLB5ME19 914 aaKnown RBP6.7□□□□□ -1.34
CDH13-209ENST00000567109 HSPA6P17066 643 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 FKBP1AP62942 108 aaKnown RBP6.7□□□□□ -1.34
CDH13-209ENST00000567109 CAPRIN1Q14444 709 aaKnown RBP6.7□□□□□ -1.34
CDH13-209ENST00000567109 TMEM259Q4ZIN3 620 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 MFSD14CQ5VZR4 134 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 RFX6Q8HWS3 928 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 FAM186BQ8IYM0 893 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 FAM84BQ96KN1 310 aaPredicted RBP6.7□□□□□ -1.34
CDH13-209ENST00000567109 NLRP4Q96MN2 994 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 PSMB7Q99436 277 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 EIF3CQ99613 913 aaKnown RBP6.7□□□□□ -1.34
CDH13-209ENST00000567109 LRWD1Q9UFC0 647 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 PPP1R9AQ9ULJ8 1098 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 RRP15Q9Y3B9 282 aaKnown RBP6.7□□□□□ -1.34
CDH13-209ENST00000567109 FIS1Q9Y3D6 152 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 MYH14Q7Z406 1995 aaKnown RBP6.7□□□□□ -1.34
CDH13-209ENST00000567109 INHBAP08476 426 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 ALX1Q15699 326 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 TEX2Q8IWB9 1127 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 CDC23Q9UJX2 597 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 STK38LQ9Y2H1 464 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 MAP2P11137 1827 aaKnown RBP6.7□□□□□ -1.34
CDH13-209ENST00000567109 UBN2Q6ZU65 1347 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 FOXP2O15409 715 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 BFSP1Q12934 665 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 IFNL3Q8IZI9 196 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 ZNF654Q8IZM8 581 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 PPWD1Q96BP3 646 aaKnown RBP6.7□□□□□ -1.34
CDH13-209ENST00000567109 DBNDD1Q9H9R9 158 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 LMNAP02545 664 aaKnown RBP6.7□□□□□ -1.34
CDH13-209ENST00000567109 TECP42680 631 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 STX1BP61266 288 aa6.7□□□□□ -1.34
CDH13-209ENST00000567109 DYNC1I2Q13409 638 aaKnown RBP6.7□□□□□ -1.34
CDH13-209ENST00000567109 IMPG1Q17R60 797 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms