RNA–Protein interactions for RNA: ENST00000566561.1

KLHDC4-216, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-216ENST00000566561 LCHNA4D1U4 455 aa14.04□□□□□ -0.16
KLHDC4-216ENST00000566561 MBLAC1A4D2B0 266 aaPredicted RBP14.04□□□□□ -0.16
KLHDC4-216ENST00000566561 RFXAPO00287 272 aa14.04□□□□□ -0.16
KLHDC4-216ENST00000566561 EIF5BO60841 1220 aaKnown RBP14.04□□□□□ -0.16
KLHDC4-216ENST00000566561 CDKL5O76039 1030 aa14.04□□□□□ -0.16
KLHDC4-216ENST00000566561 ARHGEF15O94989 841 aa14.04□□□□□ -0.16
KLHDC4-216ENST00000566561 GJB5O95377 273 aa14.04□□□□□ -0.16
KLHDC4-216ENST00000566561 CCNE2O96020 404 aa14.04□□□□□ -0.16
KLHDC4-216ENST00000566561 CHRNA1P02708 482 aa14.04□□□□□ -0.16
KLHDC4-216ENST00000566561 SLC26A2P50443 739 aa14.04□□□□□ -0.16
KLHDC4-216ENST00000566561 ANAPC15P60006 121 aa14.04□□□□□ -0.16
KLHDC4-216ENST00000566561 MARCH8Q5T0T0 291 aa14.04□□□□□ -0.16
KLHDC4-216ENST00000566561 MIS18BP1Q6P0N0 1132 aa14.04□□□□□ -0.16
KLHDC4-216ENST00000566561 ABHD15Q6UXT9 468 aa14.04□□□□□ -0.16
KLHDC4-216ENST00000566561 RPAINQ86UA6 219 aa14.04□□□□□ -0.16
KLHDC4-216ENST00000566561 TRAPPC12Q8WVT3 735 aa14.04□□□□□ -0.16
KLHDC4-216ENST00000566561 APBB2Q92870 758 aa14.04□□□□□ -0.16
KLHDC4-216ENST00000566561 HLA-CQ95604 372 aa14.04□□□□□ -0.16
KLHDC4-216ENST00000566561 ZBTB10Q96DT7 871 aa14.04□□□□□ -0.16
KLHDC4-216ENST00000566561 IFIH1Q9BYX4 1025 aaKnown RBP14.04□□□□□ -0.16
KLHDC4-216ENST00000566561 FAM49AQ9H0Q0 323 aaPredicted RBP14.04□□□□□ -0.16
KLHDC4-216ENST00000566561 SLKQ9H2G2 1235 aaPredicted RBP14.04□□□□□ -0.16
KLHDC4-216ENST00000566561 ZNF302Q9NR11 478 aa14.04□□□□□ -0.16
KLHDC4-216ENST00000566561 DHX15O43143 795 aaKnown RBP14.03□□□□□ -0.16
KLHDC4-216ENST00000566561 RPLP2P05387 115 aaKnown RBP14.03□□□□□ -0.16
KLHDC4-216ENST00000566561 GHRP10912 638 aa14.03□□□□□ -0.16
KLHDC4-216ENST00000566561 CIITAP33076 1130 aa14.03□□□□□ -0.16
KLHDC4-216ENST00000566561 SCRN1Q12765 414 aa14.03□□□□□ -0.16
KLHDC4-216ENST00000566561 ANKRD1Q15327 319 aa14.03□□□□□ -0.16
KLHDC4-216ENST00000566561 SWSAP1Q6NVH7 229 aa14.03□□□□□ -0.16
KLHDC4-216ENST00000566561 PDXDC2PQ6P474 469 aa14.03□□□□□ -0.16
KLHDC4-216ENST00000566561 CCDC60Q8IWA6 550 aaPredicted RBP14.03□□□□□ -0.16
KLHDC4-216ENST00000566561 CKAP2LQ8IYA6 745 aa14.03□□□□□ -0.16
KLHDC4-216ENST00000566561 BLIDQ8IZY5 108 aa14.03□□□□□ -0.16
KLHDC4-216ENST00000566561 TBCKQ8TEA7 893 aa14.03□□□□□ -0.16
KLHDC4-216ENST00000566561 C22orf23Q9BZE7 217 aa14.03□□□□□ -0.16
KLHDC4-216ENST00000566561 EPHX3Q9H6B9 360 aa14.03□□□□□ -0.16
KLHDC4-216ENST00000566561 PCDHA4Q9UN74 947 aa14.03□□□□□ -0.16
KLHDC4-216ENST00000566561 SAMM50Q9Y512 469 aa14.03□□□□□ -0.16
KLHDC4-216ENST00000566561 CDY2AQ9Y6F7 541 aa14.03□□□□□ -0.16
KLHDC4-216ENST00000566561 IGKV6D-21A0A0A0MT36 114 aa14.02□□□□□ -0.17
KLHDC4-216ENST00000566561 EPOPA6NHQ4 379 aa14.02□□□□□ -0.17
KLHDC4-216ENST00000566561 M0QZ92 97 aa14.02□□□□□ -0.17
KLHDC4-216ENST00000566561 HBP1O60381 514 aa14.02□□□□□ -0.17
KLHDC4-216ENST00000566561 UPP2O95045 317 aa14.02□□□□□ -0.17
KLHDC4-216ENST00000566561 USP11P51784 963 aa14.02□□□□□ -0.17
KLHDC4-216ENST00000566561 AK2P54819 239 aa14.02□□□□□ -0.17
KLHDC4-216ENST00000566561 MRPS6P82932 125 aaKnown RBP14.02□□□□□ -0.17
KLHDC4-216ENST00000566561 KRT76Q01546 638 aa14.02□□□□□ -0.17
KLHDC4-216ENST00000566561 IER5Q5VY09 327 aa14.02□□□□□ -0.17
KLHDC4-216ENST00000566561 ZNF746Q6NUN9 644 aaPredicted RBP14.02□□□□□ -0.17
KLHDC4-216ENST00000566561 TRMT1LQ7Z2T5 733 aaKnown RBP14.02□□□□□ -0.17
KLHDC4-216ENST00000566561 AIFM3Q96NN9 605 aa14.02□□□□□ -0.17
KLHDC4-216ENST00000566561 TPCN1Q9ULQ1 816 aa14.02□□□□□ -0.17
KLHDC4-216ENST00000566561 INSL6Q9Y581 213 aa14.02□□□□□ -0.17
KLHDC4-216ENST00000566561 DOCK5Q9H7D0 1870 aa14.01□□□□□ -0.17
KLHDC4-216ENST00000566561 PFKFB2O60825 505 aa14.01□□□□□ -0.17
KLHDC4-216ENST00000566561 PSAPP07602 524 aa14.01□□□□□ -0.17
KLHDC4-216ENST00000566561 XBP1P17861 261 aa14.01□□□□□ -0.17
KLHDC4-216ENST00000566561 KLRC1P26715 233 aa14.01□□□□□ -0.17
KLHDC4-216ENST00000566561 MGAT3Q09327 533 aa14.01□□□□□ -0.17
KLHDC4-216ENST00000566561 TMEM62Q0P6H9 643 aa14.01□□□□□ -0.17
KLHDC4-216ENST00000566561 LPIN1Q14693 890 aa14.01□□□□□ -0.17
KLHDC4-216ENST00000566561 KRT40Q6A162 431 aa14.01□□□□□ -0.17
KLHDC4-216ENST00000566561 GALNT17Q6IS24 598 aa14.01□□□□□ -0.17
KLHDC4-216ENST00000566561 MTHFD1LQ6UB35 978 aa14.01□□□□□ -0.17
KLHDC4-216ENST00000566561 SPRED2Q7Z698 418 aa14.01□□□□□ -0.17
KLHDC4-216ENST00000566561 SMAP1Q8IYB5 467 aaPredicted RBP14.01□□□□□ -0.17
KLHDC4-216ENST00000566561 ATP8B4Q8TF62 1192 aa14.01□□□□□ -0.17
KLHDC4-216ENST00000566561 YME1L1Q96TA2 773 aa14.01□□□□□ -0.17
KLHDC4-216ENST00000566561 MTUS1Q9ULD2 1270 aa14.01□□□□□ -0.17
KLHDC4-216ENST00000566561 PCDHA2Q9Y5H9 948 aa14.01□□□□□ -0.17
KLHDC4-216ENST00000566561 PCDHA10Q9Y5I2 948 aa14.01□□□□□ -0.17
KLHDC4-216ENST00000566561 SMIM35A0A1B0GVV1 85 aa14□□□□□ -0.17
KLHDC4-216ENST00000566561 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14□□□□□ -0.17
KLHDC4-216ENST00000566561 MSH4O15457 936 aa14□□□□□ -0.17
KLHDC4-216ENST00000566561 GAS7O60861 476 aa14□□□□□ -0.17
KLHDC4-216ENST00000566561 GPR37L1O60883 481 aa14□□□□□ -0.17
KLHDC4-216ENST00000566561 GRB10Q13322 594 aa14□□□□□ -0.17
KLHDC4-216ENST00000566561 MKRN4PQ13434 485 aaPredicted RBP14□□□□□ -0.17
KLHDC4-216ENST00000566561 ZNF484Q5JVG2 852 aa14□□□□□ -0.17
KLHDC4-216ENST00000566561 FBXO47Q5MNV8 452 aa14□□□□□ -0.17
KLHDC4-216ENST00000566561 FAM177A1Q8N128 213 aaPredicted RBP14□□□□□ -0.17
KLHDC4-216ENST00000566561 DAGLBQ8NCG7 672 aa14□□□□□ -0.17
KLHDC4-216ENST00000566561 TOP1MTQ969P6 601 aa14□□□□□ -0.17
KLHDC4-216ENST00000566561 LENG9Q96B70 501 aa14□□□□□ -0.17
KLHDC4-216ENST00000566561 TGS1Q96RS0 853 aaKnown RBP14□□□□□ -0.17
KLHDC4-216ENST00000566561 GABBR1Q9UBS5 961 aa14□□□□□ -0.17
KLHDC4-216ENST00000566561 KCNJ14Q9UNX9 436 aa14□□□□□ -0.17
KLHDC4-216ENST00000566561 TRPV2Q9Y5S1 764 aa14□□□□□ -0.17
KLHDC4-216ENST00000566561 MICAL3Q7RTP6 2002 aa14□□□□□ -0.17
KLHDC4-216ENST00000566561 LINC01553A4QN01 128 aa13.99□□□□□ -0.17
KLHDC4-216ENST00000566561 WDR64B1ANS9 1081 aa13.99□□□□□ -0.17
KLHDC4-216ENST00000566561 CHMP2AO43633 222 aa13.99□□□□□ -0.17
KLHDC4-216ENST00000566561 DTNBO60941 627 aa13.99□□□□□ -0.17
KLHDC4-216ENST00000566561 CD52P31358 61 aa13.99□□□□□ -0.17
KLHDC4-216ENST00000566561 NONOQ15233 471 aaKnown RBP eCLIP13.99□□□□□ -0.17
KLHDC4-216ENST00000566561 LRCH2Q5VUJ6 765 aa13.99□□□□□ -0.17
KLHDC4-216ENST00000566561 TSHZ1Q6ZSZ6 1077 aa13.99□□□□□ -0.17
KLHDC4-216ENST00000566561 KRT25Q7Z3Z0 450 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms