RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 IER5Q5VY09 327 aa21.47■■□□□ 1.03
ABCA3-204ENST00000566200 GJD3Q8N144 294 aa21.47■■□□□ 1.03
ABCA3-204ENST00000566200 CRYGNQ8WXF5 182 aa21.47■■□□□ 1.03
ABCA3-204ENST00000566200 PADI3Q9ULW8 664 aa21.47■■□□□ 1.03
ABCA3-204ENST00000566200 IGSF9BQ9UPX0 1349 aa21.47■■□□□ 1.03
ABCA3-204ENST00000566200 FAM86C2PA6NEL3 165 aa21.46■■□□□ 1.03
ABCA3-204ENST00000566200 FAM86B1E9PN63 330 aa21.46■■□□□ 1.03
ABCA3-204ENST00000566200 hCG_1984214I3L0E3 225 aa21.46■■□□□ 1.03
ABCA3-204ENST00000566200 RPLP2P05387 115 aaKnown RBP21.46■■□□□ 1.03
ABCA3-204ENST00000566200 FAM86B2P0C5J1 330 aa21.46■■□□□ 1.03
ABCA3-204ENST00000566200 CPA1P15085 419 aa21.46■■□□□ 1.03
ABCA3-204ENST00000566200 AP3B2Q13367 1082 aa21.46■■□□□ 1.03
ABCA3-204ENST00000566200 BTG3Q14201 252 aaPredicted RBP21.46■■□□□ 1.03
ABCA3-204ENST00000566200 TMEM31Q5JXX7 168 aa21.46■■□□□ 1.03
ABCA3-204ENST00000566200 ZNF713Q8N859 430 aaPredicted RBP21.46■■□□□ 1.03
ABCA3-204ENST00000566200 C11orf84Q9BUA3 381 aaPredicted RBP21.46■■□□□ 1.03
ABCA3-204ENST00000566200 CELF4Q9BZC1 486 aaKnown RBP21.46■■□□□ 1.03
ABCA3-204ENST00000566200 MRPL42Q9Y6G3 142 aaKnown RBP21.46■■□□□ 1.03
ABCA3-204ENST00000566200 IGLV3-22A0A075B6J6 115 aa21.45■■□□□ 1.02
ABCA3-204ENST00000566200 SMIM35A0A1B0GVV1 85 aa21.45■■□□□ 1.02
ABCA3-204ENST00000566200 POTEB3A0JP26 581 aa21.45■■□□□ 1.02
ABCA3-204ENST00000566200 DDX39AO00148 427 aaKnown RBP21.45■■□□□ 1.02
ABCA3-204ENST00000566200 DHX15O43143 795 aaKnown RBP21.45■■□□□ 1.02
ABCA3-204ENST00000566200 GPR37L1O60883 481 aa21.45■■□□□ 1.02
ABCA3-204ENST00000566200 ADD1P35611 737 aaKnown RBP21.45■■□□□ 1.02
ABCA3-204ENST00000566200 PLA2G5P39877 138 aa21.45■■□□□ 1.02
ABCA3-204ENST00000566200 CAMK1Q14012 370 aa21.45■■□□□ 1.02
ABCA3-204ENST00000566200 CTC1Q2NKJ3 1217 aa21.45■■□□□ 1.02
ABCA3-204ENST00000566200 POTEBQ6S5H4 581 aa21.45■■□□□ 1.02
ABCA3-204ENST00000566200 MTHFD1LQ6UB35 978 aa21.45■■□□□ 1.02
ABCA3-204ENST00000566200 ABHD15Q6UXT9 468 aa21.45■■□□□ 1.02
ABCA3-204ENST00000566200 CENPQQ7L2Z9 268 aaPredicted RBP21.45■■□□□ 1.02
ABCA3-204ENST00000566200 NIPA1Q7RTP0 329 aa21.45■■□□□ 1.02
ABCA3-204ENST00000566200 LMAN2LQ9H0V9 348 aa21.45■■□□□ 1.02
ABCA3-204ENST00000566200 TMX1Q9H3N1 280 aa21.45■■□□□ 1.02
ABCA3-204ENST00000566200 RWDD3Q9Y3V2 267 aa21.45■■□□□ 1.02
ABCA3-204ENST00000566200 KDM3AQ9Y4C1 1321 aa21.45■■□□□ 1.02
ABCA3-204ENST00000566200 RCAN1P53805 252 aa21.44■■□□□ 1.02
ABCA3-204ENST00000566200 DLX2Q07687 328 aaPredicted RBP21.44■■□□□ 1.02
ABCA3-204ENST00000566200 HYAL1Q12794 435 aa21.44■■□□□ 1.02
ABCA3-204ENST00000566200 PFKFB3Q16875 520 aaPredicted RBP21.44■■□□□ 1.02
ABCA3-204ENST00000566200 PUS10Q3MIT2 529 aaKnown RBP21.44■■□□□ 1.02
ABCA3-204ENST00000566200 JAKMIP3Q5VZ66 844 aa21.44■■□□□ 1.02
ABCA3-204ENST00000566200 CCDC60Q8IWA6 550 aaPredicted RBP21.44■■□□□ 1.02
ABCA3-204ENST00000566200 UIMC1Q96RL1 719 aa21.44■■□□□ 1.02
ABCA3-204ENST00000566200 FTHL17Q9BXU8 183 aa21.44■■□□□ 1.02
ABCA3-204ENST00000566200 CLDND1Q9NY35 253 aa21.44■■□□□ 1.02
ABCA3-204ENST00000566200 ZBTB42B2RXF5 422 aa21.43■■□□□ 1.02
ABCA3-204ENST00000566200 CDC45O75419 566 aa21.43■■□□□ 1.02
ABCA3-204ENST00000566200 MMP1P03956 469 aa21.43■■□□□ 1.02
ABCA3-204ENST00000566200 ATP4AP20648 1035 aa21.43■■□□□ 1.02
ABCA3-204ENST00000566200 DNAJB1P25685 340 aa21.43■■□□□ 1.02
ABCA3-204ENST00000566200 KLRC1P26715 233 aa21.43■■□□□ 1.02
ABCA3-204ENST00000566200 GTF2F1P35269 517 aaKnown RBP eCLIP21.43■■□□□ 1.02
ABCA3-204ENST00000566200 GATMP50440 423 aa21.43■■□□□ 1.02
ABCA3-204ENST00000566200 SLC26A2P50443 739 aa21.43■■□□□ 1.02
ABCA3-204ENST00000566200 TMEM266Q2M3C6 531 aa21.43■■□□□ 1.02
ABCA3-204ENST00000566200 EP400NLQ6ZTU2 488 aa21.43■■□□□ 1.02
ABCA3-204ENST00000566200 NPAS4Q8IUM7 802 aa21.43■■□□□ 1.02
ABCA3-204ENST00000566200 CMTR2Q8IYT2 770 aaKnown RBP21.43■■□□□ 1.02
ABCA3-204ENST00000566200 KCNB2Q92953 911 aa21.43■■□□□ 1.02
ABCA3-204ENST00000566200 TNPO1Q92973 898 aaKnown RBP21.43■■□□□ 1.02
ABCA3-204ENST00000566200 CDHR5Q9HBB8 845 aa21.43■■□□□ 1.02
ABCA3-204ENST00000566200 ALG13Q9NP73 1137 aaKnown RBP21.43■■□□□ 1.02
ABCA3-204ENST00000566200 PLXNA4Q9HCM2 1894 aa21.43■■□□□ 1.02
ABCA3-204ENST00000566200 EVPLQ92817 2033 aa21.43■■□□□ 1.02
ABCA3-204ENST00000566200 M0QZ92 97 aa21.42■■□□□ 1.02
ABCA3-204ENST00000566200 CYP3A4P08684 503 aa21.42■■□□□ 1.02
ABCA3-204ENST00000566200 SCG2P13521 617 aa21.42■■□□□ 1.02
ABCA3-204ENST00000566200 ZNF76P36508 570 aa21.42■■□□□ 1.02
ABCA3-204ENST00000566200 KRT76Q01546 638 aa21.42■■□□□ 1.02
ABCA3-204ENST00000566200 APOBRQ0VD83 1088 aa21.42■■□□□ 1.02
ABCA3-204ENST00000566200 PAK2Q13177 524 aa21.42■■□□□ 1.02
ABCA3-204ENST00000566200 KRT32Q14532 448 aa21.42■■□□□ 1.02
ABCA3-204ENST00000566200 PKN1Q16512 942 aa21.42■■□□□ 1.02
ABCA3-204ENST00000566200 WDR81Q562E7 1941 aa21.42■■□□□ 1.02
ABCA3-204ENST00000566200 PLA2G4DQ86XP0 818 aa21.42■■□□□ 1.02
ABCA3-204ENST00000566200 KIAA0319LQ8IZA0 1049 aa21.42■■□□□ 1.02
ABCA3-204ENST00000566200 ATP8B4Q8TF62 1192 aa21.42■■□□□ 1.02
ABCA3-204ENST00000566200 TMEM40Q8WWA1 233 aa21.42■■□□□ 1.02
ABCA3-204ENST00000566200 PLVAPQ9BX97 442 aa21.42■■□□□ 1.02
ABCA3-204ENST00000566200 GLT8D2Q9H1C3 349 aa21.42■■□□□ 1.02
ABCA3-204ENST00000566200 PLAGL2Q9UPG8 496 aa21.42■■□□□ 1.02
ABCA3-204ENST00000566200 FNDC1Q4ZHG4 1894 aaPredicted RBP21.41■■□□□ 1.02
ABCA3-204ENST00000566200 NID2Q14112 1375 aa21.41■■□□□ 1.02
ABCA3-204ENST00000566200 ESYT2A0FGR8 921 aa21.41■■□□□ 1.02
ABCA3-204ENST00000566200 HBP1O60381 514 aa21.41■■□□□ 1.02
ABCA3-204ENST00000566200 MGEA5O60502 916 aa21.41■■□□□ 1.02
ABCA3-204ENST00000566200 CSPG5O95196 566 aa21.41■■□□□ 1.02
ABCA3-204ENST00000566200 SSTR3P32745 418 aaPredicted RBP21.41■■□□□ 1.02
ABCA3-204ENST00000566200 ZP2Q05996 745 aa21.41■■□□□ 1.02
ABCA3-204ENST00000566200 PAN2Q504Q3 1202 aaKnown RBP21.41■■□□□ 1.02
ABCA3-204ENST00000566200 NME8Q8N427 588 aa21.41■■□□□ 1.02
ABCA3-204ENST00000566200 P2RX5Q93086 422 aa21.41■■□□□ 1.02
ABCA3-204ENST00000566200 ZMYND12Q9H0C1 365 aa21.41■■□□□ 1.02
ABCA3-204ENST00000566200 ERVK-5Q9HDB9 667 aa21.41■■□□□ 1.02
ABCA3-204ENST00000566200 C5orf42Q9H799 3197 aa21.4■■□□□ 1.02
ABCA3-204ENST00000566200 COL1A2P08123 1366 aa21.4■■□□□ 1.02
ABCA3-204ENST00000566200 IPO5O00410 1097 aaKnown RBP21.4■■□□□ 1.02
ABCA3-204ENST00000566200 BACH1O14867 736 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms